BLASTX 7.6.2
Query= RU23539 /QuerySize=508
(507 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P55034|PSMD4_ARATH 26S proteasome non-ATPase regulatory subun... 130 6e-030
sp|Q553E0|PSMD4_DICDI 26S proteasome non-ATPase regulatory subun... 85 2e-016
sp|O94444|RPN10_SCHPO 26S proteasome regulatory subunit rpn10 OS... 73 9e-013
sp|Q58DA0|PSMD4_BOVIN 26S proteasome non-ATPase regulatory subun... 71 3e-012
sp|P55036|PSMD4_HUMAN 26S proteasome non-ATPase regulatory subun... 71 3e-012
sp|O35226|PSMD4_MOUSE 26S proteasome non-ATPase regulatory subun... 71 3e-012
sp|P55035|PSMD4_DROME 26S proteasome non-ATPase regulatory subun... 67 6e-011
sp|P38886|RPN10_YEAST 26S proteasome regulatory subunit RPN10 OS... 66 8e-011
sp|A2A3N6|PIPSL_HUMAN Putative PIP5K1A and PSMD4-like protein OS... 63 7e-010
sp|O17453|PSMD4_SCHMA 26S proteasome non-ATPase regulatory subun... 56 1e-007
>sp|P55034|PSMD4_ARATH 26S proteasome non-ATPase regulatory subunit 4
OS=Arabidopsis thaliana GN=MBP1 PE=1 SV=1
Length = 386
Score = 130 bits (325), Expect = 6e-030
Identities = 70/135 (51%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Frame = +1
Query: 106 LKHRQNKKQQQRIIVFAGSVVKHEKKTLEMIGRKLKKNSVALDIINFGXXXXXXX-XXXX 282
LKHRQNK Q+QRIIVFAGS +K+EKK LE++G++LKKNSV+LDI+NFG
Sbjct: 98 LKHRQNKNQRQRIIVFAGSPIKYEKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLE 157
Query: 283 XXXXXVNNNDTSHIVHVPAGPSALSDVLISTPIFTXXXXXXXXXXXXXXXXXXXXXXXXX 462
VNNND SHIVHVP+G +ALSDVL+STP+FT
Sbjct: 158 ALLTAVNNNDGSHIVHVPSGANALSDVLLSTPVFT--GDEGASGYVSAAAAAAAAGGDFD 215
Query: 463 XXXXPNLDPELALAL 507
PN+DPELALAL
Sbjct: 216 FGVDPNIDPELALAL 230
Score = 63 bits (152), Expect = 7e-010
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +3
Query: 3 TPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLA 104
TPTSDLGKILACMHGL++GGE+NL A IQ+AQLA
Sbjct: 64 TPTSDLGKILACMHGLDVGGEINLTAAIQIAQLA 97
>sp|Q553E0|PSMD4_DICDI 26S proteasome non-ATPase regulatory subunit 4
OS=Dictyostelium discoideum GN=psmD4 PE=2 SV=1
Length = 349
Score = 85 bits (208), Expect = 2e-016
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 106 LKHRQNKKQQQRIIVFAGSVVKHEKKTLEMIGRKLKKNSVALDIINFGXXXXXXXXXXXX 285
L+HRQN Q RII F GS +K K+ L + ++LKKN VA+DIINFG
Sbjct: 98 LRHRQNNHQHPRIIAFVGSPLKETKEELIQLAKRLKKNGVAVDIINFG-EVTENSDKLEA 156
Query: 286 XXXXVNNNDTSHIVHVPAGPSALSDVLISTPI 381
VNNND SH++ VP GP LSD+++ +PI
Sbjct: 157 FINDVNNNDESHLLTVPPGPHILSDIILQSPI 188
>sp|O94444|RPN10_SCHPO 26S proteasome regulatory subunit rpn10
OS=Schizosaccharomyces pombe GN=rpn10 PE=1 SV=1
Length = 243
Score = 73 bits (177), Expect = 9e-013
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Frame = +1
Query: 106 LKHRQNKKQQQRIIVFAGSVVKHEKKTLEMIGRKLKKNSVALDIINFGXXXXXXXXXXXX 285
LKHR+NK Q+QRI+ F GS + ++K L + +++KKN+VA+DII+ G
Sbjct: 98 LKHRENKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG--ELQNESALQH 155
Query: 286 XXXXVNNNDTSHIVHVPAGPSALSDVLISTPI 381
N++D+ H+V +P P LSD++ +PI
Sbjct: 156 FIDAANSSDSCHLVSIPPSPQLLSDLVNQSPI 187
>sp|Q58DA0|PSMD4_BOVIN 26S proteasome non-ATPase regulatory subunit 4 OS=Bos
taurus GN=PSMD4 PE=2 SV=1
Length = 382
Score = 71 bits (172), Expect = 3e-012
Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 70 TWLLAFRWLNWPLKHRQNKKQQQRIIVFAGSVVKHEKKTLEMIGRKLKKNSVALDIINFG 249
T+ R + LKHRQ K + RII F GS V+ +K L + ++LKK V +DIINFG
Sbjct: 85 TFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFG 144
Query: 250 XXXXXXXXXXXXXXXXVNNNDT-SHIVHVPAGPSALSDVLISTPI 381
+ T SH+V VP GPS L+D LIS+PI
Sbjct: 145 EEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPS-LADALISSPI 188
>sp|P55036|PSMD4_HUMAN 26S proteasome non-ATPase regulatory subunit 4 OS=Homo
sapiens GN=PSMD4 PE=1 SV=1
Length = 377
Score = 71 bits (172), Expect = 3e-012
Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 70 TWLLAFRWLNWPLKHRQNKKQQQRIIVFAGSVVKHEKKTLEMIGRKLKKNSVALDIINFG 249
T+ R + LKHRQ K + RII F GS V+ +K L + ++LKK V +DIINFG
Sbjct: 85 TFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFG 144
Query: 250 XXXXXXXXXXXXXXXXVNNNDT-SHIVHVPAGPSALSDVLISTPI 381
+ T SH+V VP GPS L+D LIS+PI
Sbjct: 145 EEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPS-LADALISSPI 188
>sp|O35226|PSMD4_MOUSE 26S proteasome non-ATPase regulatory subunit 4 OS=Mus
musculus GN=Psmd4 PE=1 SV=1
Length = 376
Score = 71 bits (172), Expect = 3e-012
Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 70 TWLLAFRWLNWPLKHRQNKKQQQRIIVFAGSVVKHEKKTLEMIGRKLKKNSVALDIINFG 249
T+ R + LKHRQ K + RII F GS V+ +K L + ++LKK V +DIINFG
Sbjct: 85 TFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFG 144
Query: 250 XXXXXXXXXXXXXXXXVNNNDT-SHIVHVPAGPSALSDVLISTPI 381
+ T SH+V VP GPS L+D LIS+PI
Sbjct: 145 EEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPS-LADALISSPI 188
>sp|P55035|PSMD4_DROME 26S proteasome non-ATPase regulatory subunit 4
OS=Drosophila melanogaster GN=Pros54 PE=1 SV=2
Length = 396
Score = 67 bits (161), Expect = 6e-011
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +1
Query: 76 LLAFRWLNWPLKHRQNKKQQQRIIVFAGSVVKHEKKTLEMIGRKLKKNSVALDIINFGXX 255
L R + LKHRQ K + RI+VF GS + HE+ L ++LKK V +DI++FG
Sbjct: 87 LTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIVSFGDH 146
Query: 256 XXXXXXXXXXXXXXVNNNDT-SHIVHVPAGPSALSDVLISTPI 381
+ T SH+V VP G S LSD L+S+PI
Sbjct: 147 GNNNEILTAFINALNGKDGTGSHLVSVPRG-SVLSDALLSSPI 188
>sp|P38886|RPN10_YEAST 26S proteasome regulatory subunit RPN10 OS=Saccharomyces
cerevisiae GN=RPN10 PE=1 SV=3
Length = 268
Score = 66 bits (160), Expect = 8e-011
Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +1
Query: 106 LKHRQNKKQQQRIIVFAGSVVKHEKKTLEMIGRKLKKNSVALDIINFGXXXXXXXXXXXX 285
LKHRQNK Q QRI+ F S + + L + + LKKN+VA+DIINFG
Sbjct: 98 LKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFG-EIEQNTELLDE 156
Query: 286 XXXXVNN--NDTSHIVHVPAGPSALSDVLISTPI 381
VNN +TSH++ V GP L + + S+PI
Sbjct: 157 FIAAVNNPQEETSHLLTVTPGPRLLYENIASSPI 190
>sp|A2A3N6|PIPSL_HUMAN Putative PIP5K1A and PSMD4-like protein OS=Homo sapiens
GN=PIPSL PE=5 SV=1
Length = 862
Score = 63 bits (152), Expect = 7e-010
Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +1
Query: 70 TWLLAFRWLNWPLKHRQNKKQQQRIIVFAGSVVKHEKKTLEMIGRKLKKNSVALDIINFG 249
T+ + + LKHRQ + RII F G+ V+ +K L + + LKK V +DIINFG
Sbjct: 570 TFCMGIHVAHLALKHRQGNNHKIRIIAFVGNPVEDNEKNLVKLAKCLKKEKVNVDIINFG 629
Query: 250 XXXXXXXXXXXXXXXXVNNNDT-SHIVHVPAGPSALSDVLISTPI 381
+ T SH+V VP GPS L+D LIS PI
Sbjct: 630 EEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPS-LADALISFPI 673
>sp|O17453|PSMD4_SCHMA 26S proteasome non-ATPase regulatory subunit 4
OS=Schistosoma mansoni PE=2 SV=2
Length = 420
Score = 56 bits (133), Expect = 1e-007
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Frame = +1
Query: 106 LKHRQNKKQQQRIIVFAGSVVKHEKKTLEMIGRKLKKNSVALDIINFGXXXXXXXXXXXX 285
L+HRQ + Q+ RI+ F GS + ++K L + ++LKK V +DIINFG
Sbjct: 96 LRHRQLRHQKMRIVCFIGSPILEDEKELTRLAKRLKKEKVNVDIINFGENETNEQKLSEF 155
Query: 286 XXXXVNNNDT-SHIVHVPAGPSALSDVLISTPI 381
+ T SH++ V G + L D L+++P+
Sbjct: 156 IDTLNGKDGTGSHLISVAPG-TVLHDTLMTSPV 187
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,947,431,911
Number of Sequences: 462764
Number of Extensions: 24947431911
Number of Successful Extensions: 246995722
Number of sequences better than 0.0: 0
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