BLASTX 7.6.2
Query= RU23654 /QuerySize=963
(962 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O23714|PSB2A_ARATH Proteasome subunit beta type-2-A OS=Arabid... 348 4e-095
sp|O24633|PSB2B_ARATH Proteasome subunit beta type-2-B OS=Arabid... 340 9e-093
sp|Q9LST6|PSB2_ORYSJ Proteasome subunit beta type-2 OS=Oryza sat... 305 4e-082
sp|Q55DY7|PSB2_DICDI Proteasome subunit beta type-2 OS=Dictyoste... 173 2e-042
sp|Q9R1P3|PSB2_MOUSE Proteasome subunit beta type-2 OS=Mus muscu... 173 3e-042
sp|P40307|PSB2_RAT Proteasome subunit beta type-2 OS=Rattus norv... 173 3e-042
sp|P49721|PSB2_HUMAN Proteasome subunit beta type-2 OS=Homo sapi... 171 6e-042
sp|Q5E9K0|PSB2_BOVIN Proteasome subunit beta type-2 OS=Bos tauru... 170 2e-041
sp|Q09720|PSB2_SCHPO Probable proteasome subunit beta type-2 OS=... 156 2e-037
sp|Q9P6U7|PSB2_NEUCR Probable proteasome subunit beta type-2 OS=... 153 2e-036
sp|A5DB52|PSB2_PICGU Probable proteasome subunit beta type-2 OS=... 141 8e-033
sp|P22141|PSB2_YEAST Proteasome component C11 OS=Saccharomyces c... 141 8e-033
sp|Q9VQE5|PSB2_DROME Probable proteasome subunit beta type-2 OS=... 138 5e-032
sp|Q00826|PSB2_CRYNE Probable proteasome subunit beta type-2 OS=... 129 2e-029
sp|Q8U125|PSMB_PYRFU Proteasome subunit beta OS=Pyrococcus furio... 80 2e-014
sp|Q9NHC6|PSB2_TRYBB Proteasome subunit beta type-2 OS=Trypanoso... 74 9e-013
sp|P40304|PSB1_DROME Proteasome subunit beta type-1 OS=Drosophil... 66 3e-010
sp|P20618|PSB1_HUMAN Proteasome subunit beta type-1 OS=Homo sapi... 64 2e-009
sp|P38624|PSB6_YEAST Proteasome component PRE3 OS=Saccharomyces ... 61 1e-008
sp|O43063|PSB6_SCHPO Probable proteasome subunit beta type-6 OS=... 59 3e-008
sp|Q9XZG5|PSA5_TRYBB Proteasome subunit alpha type-5 OS=Trypanos... 55 5e-007
>sp|O23714|PSB2A_ARATH Proteasome subunit beta type-2-A OS=Arabidopsis thaliana
GN=PBD1 PE=1 SV=1
Length = 204
Score = 348 bits (891), Expect = 4e-095
Identities = 172/199 (86%), Positives = 184/199 (92%)
Frame = -3
Query: 840 IFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKN 661
+FGLVGN FAIVAADTSAVHSIL+HKNNEDKIMVLDSHKL+AASGEPGDRVQFTEY+QKN
Sbjct: 4 VFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYVQKN 63
Query: 660 VSLYQFRNGIPLTTAAAANFTRGELATALRKNPYHVNILMAGYDKEKGAELYYIDYIASL 481
VSLY+FRNGIPLTTAAAANFTRGELATALRKNPY VNILMAGYD E GA LYYIDYIA+L
Sbjct: 64 VSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYIATL 123
Query: 480 HKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKIVD 301
HKV+KGAFGYGSYF+LS MDR Y MSVEEAI LVDK I+EIRSRLVVAPPNFVIKIVD
Sbjct: 124 HKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIKIVD 183
Query: 300 KDGAREYAWRESIKDAGVA 244
KDGAR+YAWR+S+KD A
Sbjct: 184 KDGARDYAWRQSVKDVTTA 202
>sp|O24633|PSB2B_ARATH Proteasome subunit beta type-2-B OS=Arabidopsis thaliana
GN=PBD2 PE=1 SV=1
Length = 199
Score = 340 bits (871), Expect = 9e-093
Identities = 169/196 (86%), Positives = 179/196 (91%)
Frame = -3
Query: 840 IFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKN 661
+FGLVGN FAIVAADTSAVHSIL+HKN EDKIM LDSHKL+AASGEPGDRVQFTEY+QKN
Sbjct: 4 VFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYVQKN 63
Query: 660 VSLYQFRNGIPLTTAAAANFTRGELATALRKNPYHVNILMAGYDKEKGAELYYIDYIASL 481
VSLYQFRNGIPL+TAAAANFTRGELATALRKNPY VNILMAGYDKE GA LYYIDYIA+L
Sbjct: 64 VSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYIATL 123
Query: 480 HKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKIVD 301
HKV+KGAFGYGSYF+LS MDR Y MSVEEAI LVDK I+EIRSRLV+APPNFVIKIVD
Sbjct: 124 HKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIKIVD 183
Query: 300 KDGAREYAWRESIKDA 253
KDGAREY WR S DA
Sbjct: 184 KDGAREYGWRISTADA 199
>sp|Q9LST6|PSB2_ORYSJ Proteasome subunit beta type-2 OS=Oryza sativa subsp.
japonica GN=PBD1 PE=2 SV=2
Length = 212
Score = 305 bits (779), Expect = 4e-082
Identities = 149/190 (78%), Positives = 168/190 (88%)
Frame = -3
Query: 840 IFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKN 661
+ G+VG DFA+VAADTSAV SILVHK +EDK+MVLDSHKL+ ASGEPGDRVQFTE+IQKN
Sbjct: 4 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQKN 63
Query: 660 VSLYQFRNGIPLTTAAAANFTRGELATALRKNPYHVNILMAGYDKEKGAELYYIDYIASL 481
+ LYQFRN IPL+TAA ANFTRGELATALRKNPY+VN+L+AGYD + GA LYYIDYIA+
Sbjct: 64 LHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYIATF 123
Query: 480 HKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKIVD 301
HK+EKGAFGYGSYF LSLMD+LY MSVEEA+ LVDK I EIR RLVVAP NF+IKIVD
Sbjct: 124 HKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNFIIKIVD 183
Query: 300 KDGAREYAWR 271
K+GAREYA R
Sbjct: 184 KEGAREYARR 193
>sp|Q55DY7|PSB2_DICDI Proteasome subunit beta type-2 OS=Dictyostelium discoideum
GN=psmB2 PE=3 SV=1
Length = 198
Score = 173 bits (437), Expect = 2e-042
Identities = 84/175 (48%), Positives = 121/175 (69%), Gaps = 4/175 (2%)
Frame = -3
Query: 801 ADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKNVSLYQFRNGIPLT 622
AD+S HSI+ K++EDKI+ +D HKL+ ++GE GDRVQFTEYI KN+ LY RN P++
Sbjct: 17 ADSSVNHSIVKMKDDEDKILEIDGHKLLLSAGEAGDRVQFTEYISKNIKLYSLRNSYPMS 76
Query: 621 TAAAANFTRGELATALRKNPYHVNILMAGYDKE---KGAELYYIDYIASLHKVEKGAFGY 451
T AAANF R ELAT++R +PY +N+++AGYDKE G LYY+DY+ SL K+ G GY
Sbjct: 77 TPAAANFIRNELATSIRSHPYSINLILAGYDKEVEDGGTSLYYMDYLGSLQKLNFGCHGY 136
Query: 450 GSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKIVDKDGAR 286
SYF L L+DR + +S+E+ I L+ E+++R +V+ + +K V +G +
Sbjct: 137 ASYFLLGLLDRHHKCDLSLEDGINLMHLCTTELKTRFLVS-GKYTLKFVSSEGIK 190
>sp|Q9R1P3|PSB2_MOUSE Proteasome subunit beta type-2 OS=Mus musculus GN=Psmb2
PE=1 SV=1
Length = 201
Score = 173 bits (436), Expect = 3e-042
Identities = 84/184 (45%), Positives = 122/184 (66%), Gaps = 1/184 (0%)
Frame = -3
Query: 840 IFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKN 661
+ G+ G D+ +VA+D A +I+ K++ DK+ + L+ GE GD VQF EYIQKN
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 660 VSLYQFRNGIPLTTAAAANFTRGELATALR-KNPYHVNILMAGYDKEKGAELYYIDYIAS 484
V LY+ RNG L+ AAANFTR LA LR + PYHVN+L+AGYD+ +G LYY+DY+A+
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123
Query: 483 LHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKIV 304
L K A GYG++ LS++DR Y +S E A+ L+ K + E++ R ++ P F ++++
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVI 183
Query: 303 DKDG 292
DKDG
Sbjct: 184 DKDG 187
>sp|P40307|PSB2_RAT Proteasome subunit beta type-2 OS=Rattus norvegicus GN=Psmb2
PE=1 SV=1
Length = 201
Score = 173 bits (436), Expect = 3e-042
Identities = 84/184 (45%), Positives = 122/184 (66%), Gaps = 1/184 (0%)
Frame = -3
Query: 840 IFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKN 661
+ G+ G D+ +VA+D A +I+ K++ DK+ + L+ GE GD VQF EYIQKN
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 660 VSLYQFRNGIPLTTAAAANFTRGELATALR-KNPYHVNILMAGYDKEKGAELYYIDYIAS 484
V LY+ RNG L+ AAANFTR LA LR + PYHVN+L+AGYD+ +G LYY+DY+A+
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123
Query: 483 LHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKIV 304
L K A GYG++ LS++DR Y +S E A+ L+ K + E++ R ++ P F ++++
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVI 183
Query: 303 DKDG 292
DKDG
Sbjct: 184 DKDG 187
>sp|P49721|PSB2_HUMAN Proteasome subunit beta type-2 OS=Homo sapiens GN=PSMB2
PE=1 SV=1
Length = 201
Score = 171 bits (433), Expect = 6e-042
Identities = 84/187 (44%), Positives = 123/187 (65%), Gaps = 1/187 (0%)
Frame = -3
Query: 840 IFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKN 661
+ G+ G D+ +VA+D A +I+ K++ DK+ + L+ GE GD VQF EYIQKN
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 660 VSLYQFRNGIPLTTAAAANFTRGELATALR-KNPYHVNILMAGYDKEKGAELYYIDYIAS 484
V LY+ RNG L+ AAANFTR LA LR + PYHVN+L+AGYD+ +G LYY+DY+A+
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123
Query: 483 LHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKIV 304
L K A GYG++ LS++DR Y +S E A+ L+ K + E++ R ++ P F ++I+
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRII 183
Query: 303 DKDGARE 283
DK+G +
Sbjct: 184 DKNGIHD 190
>sp|Q5E9K0|PSB2_BOVIN Proteasome subunit beta type-2 OS=Bos taurus GN=PSMB2 PE=1
SV=1
Length = 201
Score = 170 bits (429), Expect = 2e-041
Identities = 83/187 (44%), Positives = 124/187 (66%), Gaps = 1/187 (0%)
Frame = -3
Query: 840 IFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKN 661
+ G+ G D+ +VA+D A +I+ K++ DK+ + L+ GE GD VQF EYIQKN
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 660 VSLYQFRNGIPLTTAAAANFTRGELATALR-KNPYHVNILMAGYDKEKGAELYYIDYIAS 484
V LY+ RNG L+ AAANFTR LA LR + PYHVN+L+AGYD+ +G LYY+DY+A+
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123
Query: 483 LHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKIV 304
L K A GYG++ LS++DR Y +S E+A+ L+ K + E++ R ++ P F ++I+
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISREKAVELLRKCLEELQKRFILNLPTFSVRII 183
Query: 303 DKDGARE 283
D++G +
Sbjct: 184 DRNGIHD 190
>sp|Q09720|PSB2_SCHPO Probable proteasome subunit beta type-2
OS=Schizosaccharomyces pombe GN=SPAC31A2.04c PE=2 SV=1
Length = 194
Score = 156 bits (393), Expect = 2e-037
Identities = 78/189 (41%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
Frame = -3
Query: 843 SIFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQK 664
S+ + G DF + A+ +SAV I V K ++DK +L+SH L+ GE GD F EYI
Sbjct: 3 SLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYIAA 62
Query: 663 NVSLYQFRNGIPLTTAAAANFTRGELATALR-KNPYHVNILMAGYDKEKG-AELYYIDYI 490
N+SLY R+ + L+ A A+FTR +LAT+LR + PY VNIL+AGY+ G EL+++DY+
Sbjct: 63 NISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLDYL 122
Query: 489 ASLHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIK 310
A+ +V GY S++ LS+ DR Y ++++EA+ ++ E++ R+ + F+ K
Sbjct: 123 ATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAVRIMKLCFDELKKRMPIDFKGFICK 182
Query: 309 IVDKDGARE 283
+VDKDG RE
Sbjct: 183 VVDKDGIRE 191
>sp|Q9P6U7|PSB2_NEUCR Probable proteasome subunit beta type-2 OS=Neurospora
crassa GN=15E6.60 PE=3 SV=1
Length = 203
Score = 153 bits (386), Expect = 2e-036
Identities = 79/185 (42%), Positives = 114/185 (61%), Gaps = 2/185 (1%)
Frame = -3
Query: 840 IFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKN 661
+ G+ G DF I+AA +A+ + K ++DK L+ H L+A SGE GD VQF EY Q N
Sbjct: 4 LLGITGKDFTIIAASKAAMRGATILKASDDKTRSLNKHTLMAFSGEAGDTVQFAEYTQAN 63
Query: 660 VSLYQFRNGIPLTTAAAANFTRGELATALR-KNPYHVNILMAGYDK-EKGAELYYIDYIA 487
LY RNG L+ +A ANF RGELAT+LR + PY+VN+L+ G D LY++DY+A
Sbjct: 64 AQLYSMRNGTDLSPSALANFVRGELATSLRSRKPYNVNLLLGGVDPITHKPSLYWLDYLA 123
Query: 486 SLHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKI 307
SL KV A GY Y+ LS++D+ +H +++ + I L++ E++ RL + +K
Sbjct: 124 SLAKVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKLLNLCTDELKRRLPIDFKGMTVKA 183
Query: 306 VDKDG 292
V KDG
Sbjct: 184 VTKDG 188
>sp|A5DB52|PSB2_PICGU Probable proteasome subunit beta type-2 OS=Pichia
guilliermondii GN=PRO2 PE=3 SV=1
Length = 194
Score = 141 bits (354), Expect = 8e-033
Identities = 77/188 (40%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
Frame = -3
Query: 840 IFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKN 661
+ G+ D +VA +A I V K+ +DK L+SH L+A SGE GD VQF EYIQ N
Sbjct: 4 VLGIRVEDCTLVATSKAATRGISVLKDTDDKTRQLNSHNLMAYSGEAGDTVQFAEYIQAN 63
Query: 660 VSLYQFR-NGIPLTTAAAANFTRGELATALR-KNPYHVNILMAGYDKEKG-AELYYIDYI 490
LY R N L+ A A+F R +LAT++R + PY VN+L+AGYD G L +IDY+
Sbjct: 64 TQLYTMRENDTELSPKATASFVRNQLATSIRSRKPYQVNVLLAGYDTNTGKPSLNWIDYL 123
Query: 489 ASLHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIK 310
+ ++ A GY ++ SL+D+ Y KGM+ E+ + L+ K I E+ +R+ + IK
Sbjct: 124 GTQVELPYAAHGYAGFYCTSLLDKHYKKGMNFEDGLDLLKKCIKELETRMPIDFKGCYIK 183
Query: 309 IVDKDGAR 286
+VDK+G +
Sbjct: 184 VVDKEGIK 191
>sp|P22141|PSB2_YEAST Proteasome component C11 OS=Saccharomyces cerevisiae
GN=PRE1 PE=1 SV=2
Length = 198
Score = 141 bits (354), Expect = 8e-033
Identities = 74/188 (39%), Positives = 111/188 (59%), Gaps = 2/188 (1%)
Frame = -3
Query: 840 IFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKN 661
I G+ D I+A+ + I V K+++DK L H L++ +GE GD VQF EYIQ N
Sbjct: 4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQAN 63
Query: 660 VSLYQFRNGIPLTTAAAANFTRGELATALR-KNPYHVNILMAGYDKEKG-AELYYIDYIA 487
+ LY R L+ A ++F R ELA ++R + PY VN+L+ GYDK+K ELY IDY+
Sbjct: 64 IQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLG 123
Query: 486 SLHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKI 307
+ ++ GA GY ++ SL+D Y M+ EE + L+ + E+ R+ + ++KI
Sbjct: 124 TKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKI 183
Query: 306 VDKDGARE 283
VDKDG R+
Sbjct: 184 VDKDGIRQ 191
>sp|Q9VQE5|PSB2_DROME Probable proteasome subunit beta type-2 OS=Drosophila
melanogaster GN=CG17302 PE=1 SV=3
Length = 210
Score = 138 bits (347), Expect = 5e-032
Identities = 69/188 (36%), Positives = 116/188 (61%), Gaps = 1/188 (0%)
Frame = -3
Query: 843 SIFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQK 664
+I G+ G DF ++A+DT S++ K+++ KI L ++A G+ GD +QFT++I K
Sbjct: 5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISK 64
Query: 663 NVSLYQFRNGIPLTTAAAANFTRGELATALRKNP-YHVNILMAGYDKEKGAELYYIDYIA 487
N+ LY+ +G L+ +AA+FTR LA +R N Y V +L+AGYD +G +L+YID
Sbjct: 65 NLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYG 124
Query: 486 SLHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKI 307
+ + G+GS F S++ R ++ +S E+A +L+ K ++EI+ RL++ NF + +
Sbjct: 125 AAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYV 184
Query: 306 VDKDGARE 283
VD G R+
Sbjct: 185 VDSKGMRK 192
>sp|Q00826|PSB2_CRYNE Probable proteasome subunit beta type-2 OS=Cryptococcus
neoformans GN=CPR1 PE=3 SV=1
Length = 224
Score = 129 bits (324), Expect = 2e-029
Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 3/184 (1%)
Frame = -3
Query: 837 FGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKNV 658
FG+ G D+ I+A+D A SI+ K++E+K+ L H +A SGEPGD F EYI++N+
Sbjct: 5 FGITGKDYVILASDMGAGRSIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYIERNM 64
Query: 657 SLYQFRNGIPLTTAAAANFTRGELATALR-KNPYHVNILMAGYDKEKG-AELYYIDYIAS 484
LY RN PL AA+ + R LA A+R ++PY VN+L+ G+D LY+IDY+ +
Sbjct: 65 RLYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWIDYLGT 124
Query: 483 LHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKIV 304
V A G G Y +LS MD+ +++ M +E + L+ K I E RL + +F ++
Sbjct: 125 KAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCIDETEKRLTI-KFDFNCILI 183
Query: 303 DKDG 292
DK+G
Sbjct: 184 DKNG 187
>sp|Q8U125|PSMB_PYRFU Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB
PE=3 SV=1
Length = 206
Score = 80 bits (196), Expect = 2e-014
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 3/189 (1%)
Frame = -3
Query: 834 GLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKNVS 655
GLV + ++AADT A +++ N KI +D H IA +G+ GD + ++ +
Sbjct: 15 GLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEAN 74
Query: 654 LYQFRNGIPLTTAAAANFTRGELATALRKNPYHVNILMAGYDKEKGAELYYIDYIASLHK 475
LY+ G ++ A A + + PY L+ GYD++ L+ +D + + +
Sbjct: 75 LYKSTVGKEMSVKALATLL-ANILNGSKYFPYLGWFLVGGYDEK--PRLFSVDMVGGITE 131
Query: 474 VEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKIVDKD 295
A G G FA S++D Y + MSV + I L K I R V ++ + KD
Sbjct: 132 DNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKD 191
Query: 294 GAREYAWRE 268
G +EY E
Sbjct: 192 GYKEYRGAE 200
>sp|Q9NHC6|PSB2_TRYBB Proteasome subunit beta type-2 OS=Trypanosoma brucei
brucei GN=PSB4 PE=2 SV=1
Length = 206
Score = 74 bits (181), Expect = 9e-013
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Frame = -3
Query: 819 DFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKNVSLYQFR 640
DF +VAA + + EDKI LDSHK++A +GE G R F EY++ N++L + R
Sbjct: 12 DFVLVAAAGLNAFYYIKITDTEDKITELDSHKVVACAGENGPRTHFVEYVKCNMALKKMR 71
Query: 639 -NGIPLTTAAAANFTRGELATALRKNP--YHVNILMAGYDKEKGAE 511
+G ++T A A+F R LA ALR Y VN L+AG+D AE
Sbjct: 72 EHGRMISTHATASFMRNTLAGALRSRDGLYPVNCLLAGFDVPASAE 117
>sp|P40304|PSB1_DROME Proteasome subunit beta type-1 OS=Drosophila melanogaster
GN=Pros26 PE=1 SV=2
Length = 235
Score = 66 bits (159), Expect = 3e-010
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Frame = -3
Query: 843 SIFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQK 664
SI + G+DFA++AADT +H + K+ L ++ ++G D + T I+
Sbjct: 31 SIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKV 90
Query: 663 NVSLYQFRNGIPLTTAAAANFTRGELATAL---RKNPYHVNILMAGYDKEKGAELYYIDY 493
+ Y+ + +TT A A L+ A+ R PY+V+ ++AG D E +Y D
Sbjct: 91 RMQSYEHTHLRTMTTEAVAQM----LSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDP 146
Query: 492 IASLHKVEKGAFGYGSYFALSLMD-RLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFV 316
I K A G ++D ++ HK M++E+A DKI + + VA F+
Sbjct: 147 IGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDA----DKIKLTKERAVSVASDTFI 202
>sp|P20618|PSB1_HUMAN Proteasome subunit beta type-1 OS=Homo sapiens GN=PSMB1
PE=1 SV=2
Length = 241
Score = 64 bits (153), Expect = 2e-009
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Frame = -3
Query: 843 SIFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQK 664
+I + G DFAIVA+DT +H + K L +I SG GD + T+ I+
Sbjct: 39 TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEA 98
Query: 663 NVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYHVNILMAGYDKEKGAELYYIDYIAS 484
+ +Y+ N +TT A A + + R PY+V ++ G D+E +Y D + S
Sbjct: 99 RLKMYKHSNNKAMTTGAIAAML-STILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGS 157
Query: 483 LHKVEKGAFGYGSYFALSLMD 421
+ A G S L+D
Sbjct: 158 YQRDSFKAGGSASAMLQPLLD 178
>sp|P38624|PSB6_YEAST Proteasome component PRE3 OS=Saccharomyces cerevisiae
GN=PRE3 PE=1 SV=2
Length = 215
Score = 61 bits (146), Expect = 1e-008
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 3/157 (1%)
Frame = -3
Query: 843 SIFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQK 664
SI + D I+ AD+ + DK+ + SG D + +Q
Sbjct: 21 SIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQY 80
Query: 663 NVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYHVNILMAGYDKEKGAELYYIDYIAS 484
++ LY + G P T AA+ F EL K+ I++AGYD + E+Y I S
Sbjct: 81 HLELYTSQYGTPSTETAASVFK--ELCYE-NKDNLTAGIIVAGYDDKNKGEVYTIPLGGS 137
Query: 483 LHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALV 373
+HK+ G GS F D+ + + MS EE + +
Sbjct: 138 VHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFI 174
>sp|O43063|PSB6_SCHPO Probable proteasome subunit beta type-6
OS=Schizosaccharomyces pombe GN=SPBC4C3.10c PE=2 SV=1
Length = 226
Score = 59 bits (142), Expect = 3e-008
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 2/184 (1%)
Frame = -3
Query: 843 SIFGLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQK 664
+I L D I+AAD+ + DK+ L + SG D + ++
Sbjct: 26 TITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKY 85
Query: 663 NVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYHVNILMAGYDKEKGAELYYIDYIAS 484
+S+Y+ + G + AA T KN +++AGYD++ G ++Y I S
Sbjct: 86 YLSMYRIQFGHDPSVHTAA--TLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLGGS 143
Query: 483 LHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEIRSRLVVAPPNFVIKIV 304
LHK G GS F D + + M+ EEA+ + + R + + I+
Sbjct: 144 LHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVIL 203
Query: 303 DKDG 292
+KDG
Sbjct: 204 NKDG 207
>sp|Q9XZG5|PSA5_TRYBB Proteasome subunit alpha type-5 OS=Trypanosoma brucei
brucei PE=3 SV=1
Length = 246
Score = 55 bits (132), Expect = 5e-007
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Frame = -3
Query: 834 GLVGNDFAIVAADTSAVHSILVHKNNEDKIMVLDSHKLIAASGEPGDRVQFTEYIQKNVS 655
G+ D I+AA+ V S LV ++ +KI+ +D H SG D ++ +
Sbjct: 39 GIQTPDAVIIAAE-KRVPSTLVDPSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQ 97
Query: 654 LYQFRNGIPLTTAAAA--------NFTRGELATALRKNPYHVNILMAGYDKEKGAELYYI 499
++F P++ + A F L P+ V++L+AG D E G +L+
Sbjct: 98 NHRFTYDEPMSVESCALATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVD-ENGPQLWQT 156
Query: 498 DYIASLHKVEKGAFGYGSYFALSLMDRLYHKGMSVEEAIALVDKIIIEI 352
D + + + A G G+ A ++ YH+ M+VEEA L +I+ ++
Sbjct: 157 DPSGTYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEEAENLTVQILRQV 205
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,307,528,686
Number of Sequences: 462764
Number of Extensions: 25307528686
Number of Successful Extensions: 254258058
Number of sequences better than 0.0: 0
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