BLASTX 7.6.2
Query= RU24360 /QuerySize=364
(363 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P49592|NC2B_ARATH Protein Dr1 homolog OS=Arabidopsis thaliana... 119 3e-027
sp|Q55DJ5|NC2B_DICDI Protein Dr1 homolog OS=Dictyostelium discoi... 73 3e-013
sp|O14348|NC2B_SCHPO Negative cofactor 2 complex subunit beta OS... 69 5e-012
sp|Q5ZMV3|NC2B_CHICK Protein Dr1 OS=Gallus gallus GN=DR1 PE=2 SV=1 63 4e-010
sp|Q01658|NC2B_HUMAN Protein Dr1 OS=Homo sapiens GN=DR1 PE=1 SV=1 63 4e-010
sp|Q91WV0|NC2B_MOUSE Protein Dr1 OS=Mus musculus GN=Dr1 PE=2 SV=1 63 4e-010
sp|Q5XI68|NC2B_RAT Protein Dr1 OS=Rattus norvegicus GN=Dr1 PE=2 ... 63 4e-010
sp|Q9VJQ5|NC2B_DROME Protein Dr1 OS=Drosophila melanogaster GN=N... 61 1e-009
>sp|P49592|NC2B_ARATH Protein Dr1 homolog OS=Arabidopsis thaliana GN=DR1 PE=2
SV=1
Length = 159
Score = 119 bits (298), Expect = 3e-027
Identities = 58/61 (95%), Positives = 61/61 (100%)
Frame = +1
Query: 160 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNE 339
M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINL+SSESN+
Sbjct: 1 MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60
Query: 340 V 342
V
Sbjct: 61 V 61
>sp|Q55DJ5|NC2B_DICDI Protein Dr1 homolog OS=Dictyostelium discoideum GN=dr1
PE=3 SV=1
Length = 178
Score = 73 bits (177), Expect = 3e-013
Identities = 31/57 (54%), Positives = 48/57 (84%)
Frame = +1
Query: 190 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEV*AERRK 360
+++ SLPKAT++K+IKEMLP DV+ + + +DL++ECCVEFI+LISSE+N++ +K
Sbjct: 8 EDNLSLPKATVSKLIKEMLPQDVKCSNETRDLILECCVEFIHLISSEANDICGREQK 64
>sp|O14348|NC2B_SCHPO Negative cofactor 2 complex subunit beta
OS=Schizosaccharomyces pombe GN=ncb2 PE=2 SV=1
Length = 161
Score = 69 bits (167), Expect = 5e-012
Identities = 30/61 (49%), Positives = 48/61 (78%)
Frame = +1
Query: 181 GKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEV*AERRK 360
G + ++ SLPKAT+ K++ ++LP D+ ++A+DLLIECCVEFI+L+SSE+NE+ + K
Sbjct: 4 GFADDELSLPKATVQKMVSDILPVDLTFTKEARDLLIECCVEFIHLVSSEANEICEKEAK 63
Query: 361 E 363
+
Sbjct: 64 K 64
>sp|Q5ZMV3|NC2B_CHICK Protein Dr1 OS=Gallus gallus GN=DR1 PE=2 SV=1
Length = 176
Score = 63 bits (151), Expect = 4e-010
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +1
Query: 193 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEV 342
+D ++P+A + K+IKE L P+VRVA DA++L++ CC EFI+LISSE+NE+
Sbjct: 9 DDLTIPRAAINKMIKETL-PNVRVANDARELVVNCCTEFIHLISSEANEI 57
>sp|Q01658|NC2B_HUMAN Protein Dr1 OS=Homo sapiens GN=DR1 PE=1 SV=1
Length = 176
Score = 63 bits (151), Expect = 4e-010
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +1
Query: 193 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEV 342
+D ++P+A + K+IKE L P+VRVA DA++L++ CC EFI+LISSE+NE+
Sbjct: 9 DDLTIPRAAINKMIKETL-PNVRVANDARELVVNCCTEFIHLISSEANEI 57
>sp|Q91WV0|NC2B_MOUSE Protein Dr1 OS=Mus musculus GN=Dr1 PE=2 SV=1
Length = 176
Score = 63 bits (151), Expect = 4e-010
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +1
Query: 193 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEV 342
+D ++P+A + K+IKE L P+VRVA DA++L++ CC EFI+LISSE+NE+
Sbjct: 9 DDLTIPRAAINKMIKETL-PNVRVANDARELVVNCCTEFIHLISSEANEI 57
>sp|Q5XI68|NC2B_RAT Protein Dr1 OS=Rattus norvegicus GN=Dr1 PE=2 SV=1
Length = 176
Score = 63 bits (151), Expect = 4e-010
Identities = 28/50 (56%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +1
Query: 193 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEV 342
+D ++P+A + K+IKE L P+VRVA DA++L++ CC EFI+LISSE+NE+
Sbjct: 9 DDLTIPRAAINKMIKETL-PNVRVANDARELVVNCCTEFIHLISSEANEI 57
>sp|Q9VJQ5|NC2B_DROME Protein Dr1 OS=Drosophila melanogaster GN=NC2beta PE=1
SV=1
Length = 183
Score = 61 bits (146), Expect = 1e-009
Identities = 29/57 (50%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = +1
Query: 193 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEV*AERRKE 363
++ +LP+A++ KIIKE++ P VRVA ++++L++ CC EFI+LISSE+NEV R K+
Sbjct: 16 DELTLPRASINKIIKELV-PTVRVANESRELILNCCSEFIHLISSEANEVCNMRNKK 71
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,639,061,295
Number of Sequences: 462764
Number of Extensions: 27639061295
Number of Successful Extensions: 270866551
Number of sequences better than 0.0: 0
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