BLASTX 7.6.2
Query= RU24457 /QuerySize=1118
(1117 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O81488|Y5621_ARATH PHD finger protein At5g26210 OS=Arabidopsi... 180 2e-044
sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF O... 58 1e-007
sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF3... 58 1e-007
sp|Q6ZMT4|JHD1D_HUMAN JmjC domain-containing histone demethylati... 54 2e-006
sp|Q3UWM4|JHD1D_MOUSE JmjC domain-containing histone demethylati... 53 4e-006
sp|Q9UPP1|PHF8_HUMAN PHD finger protein 8 OS=Homo sapiens GN=PHF... 53 4e-006
sp|Q80TJ7|PHF8_MOUSE PHD finger protein 8 OS=Mus musculus GN=Phf... 53 4e-006
>sp|O81488|Y5621_ARATH PHD finger protein At5g26210 OS=Arabidopsis thaliana
GN=At5g26210 PE=1 SV=2
Length = 255
Score = 180 bits (455), Expect = 2e-044
Identities = 89/146 (60%), Positives = 108/146 (73%), Gaps = 4/146 (2%)
Frame = +3
Query: 138 ATSPRTVEEIFKDYGARRAAVVRALTYDVDEFYGLCDPEKENLCLYGHPNESWXXXXXXX 317
A +PRTVEE+F+D+ RRA +++ALT DV EF+ LCDPEKENLCLYGHPNE W
Sbjct: 6 AYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNLPAE 65
Query: 318 XXXXXXXXXXXGINFARDGMNRKDWLSLVAVHSDSWLLSVAFYFGAR--LNRNERKRLFS 491
GINFARDGM KDWLSLVAVHSD+WLL+VAF+FGAR ++ +RKRLF+
Sbjct: 66 EVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADRKRLFN 125
Query: 492 LINDLPTVFEVV--TDRKPAKDKPSV 563
++NDLPT+FEVV T +K KDK SV
Sbjct: 126 MVNDLPTIFEVVAGTAKKQGKDKSSV 151
Score = 104 bits (259), Expect = 1e-021
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = +3
Query: 678 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSLKRSR 842
T CG+CG +Y ADEFWI CD+CE WFHGKCVKITPA+AE+IKQYKCPSCS KR+R
Sbjct: 200 TQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 254
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens
GN=BPTF PE=1 SV=3
Length = 3046
Score = 58 bits (138), Expect = 1e-007
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 693 CGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSC 824
C Y+ +F+IGCD C+ W+HG+CV I ++AE I +Y CP C
Sbjct: 2872 CKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQC 2915
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301
OS=Drosophila melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 58 bits (138), Expect = 1e-007
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +3
Query: 690 SCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSLK 833
SC Y+ +F+I CD C+ WFHG+CV I ++AE I +Y CP C K
Sbjct: 2499 SCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRK 2546
Score = 54 bits (128), Expect = 2e-006
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 693 CGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSLKRSRQ 845
C Y+ +F++GCD+C WFHG CV IT ++ + ++ C C R Q
Sbjct: 2444 CRTPYDDTKFYVGCDLCSNWFHGDCVSITEEASKKLSEFICIDCKRARETQ 2494
>sp|Q6ZMT4|JHD1D_HUMAN JmjC domain-containing histone demethylation protein 1D
OS=Homo sapiens GN=JHDM1D PE=2 SV=2
Length = 941
Score = 54 bits (127), Expect = 2e-006
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 693 CGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSC------SLKRSRQ*W 851
C Y+ + F I CDIC+ WFHG CV + A +I Y CP+C SL + R+ W
Sbjct: 42 CRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLHGSSLMKKRRNW 100
>sp|Q3UWM4|JHD1D_MOUSE JmjC domain-containing histone demethylation protein 1D
OS=Mus musculus GN=Jhdm1d PE=2 SV=2
Length = 940
Score = 53 bits (125), Expect = 4e-006
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +3
Query: 693 CGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSC------SLKRSRQ*W 851
C Y+ + F I CD+C+ WFHG CV + A +I Y CP C SL + R+ W
Sbjct: 42 CRQPYDVNRFMIECDVCKDWFHGSCVGVEEHHAVDIDLYHCPDCAALHGSSLMKKRRNW 100
>sp|Q9UPP1|PHF8_HUMAN PHD finger protein 8 OS=Homo sapiens GN=PHF8 PE=1 SV=3
Length = 1060
Score = 53 bits (125), Expect = 4e-006
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 693 CGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSL 830
C Y+ F I CD+C+ WFHG CV + KA +I Y CP+C +
Sbjct: 46 CRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEV 91
>sp|Q80TJ7|PHF8_MOUSE PHD finger protein 8 OS=Mus musculus GN=Phf8 PE=1 SV=2
Length = 1023
Score = 53 bits (125), Expect = 4e-006
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 693 CGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSL 830
C Y+ F I CD+C+ WFHG CV + KA +I Y CP+C +
Sbjct: 10 CRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEV 55
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,639,061,295
Number of Sequences: 462764
Number of Extensions: 27639061295
Number of Successful Extensions: 270866551
Number of sequences better than 0.0: 0
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