BLASTX 7.6.2
Query= RU25918 /QuerySize=1348
(1347 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q10EL1|C3H24_ORYSJ Zinc finger CCCH domain-containing protein... 332 3e-090
sp|Q2QPW2|C3H67_ORYSJ Zinc finger CCCH domain-containing protein... 243 2e-063
sp|Q688R3|C3H33_ORYSJ Zinc finger CCCH domain-containing protein... 202 5e-051
sp|Q84SL2|C3H50_ORYSJ Zinc finger CCCH domain-containing protein... 192 5e-048
sp|Q9FU27|C3H2_ORYSJ Zinc finger CCCH domain-containing protein ... 183 2e-045
sp|Q6L4N4|C3H35_ORYSJ Zinc finger CCCH domain-containing protein... 176 4e-043
sp|Q65X92|C3H37_ORYSJ Zinc finger CCCH domain-containing protein... 144 1e-033
sp|Q94JI5|C3H10_ORYSJ Zinc finger CCCH domain-containing protein... 138 1e-031
>sp|Q10EL1|C3H24_ORYSJ Zinc finger CCCH domain-containing protein 24 OS=Oryza
sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1
Length = 764
Score = 332 bits (851), Expect = 3e-090
Identities = 168/306 (54%), Positives = 199/306 (65%), Gaps = 10/306 (3%)
Frame = -2
Query: 917 PSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVP 738
PSLPDIKN RM+S K+RP SRAYSHDWTECPFVH GENARRRDPRK+HYSCVP
Sbjct: 267 PSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVP 326
Query: 737 CPEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLY 558
CP+FRKG CRRG MCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLY
Sbjct: 327 CPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLY 386
Query: 557 VSTGSAVPSPRSSASGPTVMDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGISQSSV 378
VSTGSAVPSPR+SA+ M NG+ S+
Sbjct: 387 VSTGSAVPSPRASATATMEM---AAAMGLMPGSPSSVSAVMSPFTPPMSPSGNGM-PPSL 442
Query: 377 AWPHPNVPTLHLPGXXXXXXXXXXXXXXXDIPPENLNLLRELDAQQQLLNELNCFSQPRP 198
W PNVPTLHLPG D+P ++ +L++++D+ QL+N+L C+S R
Sbjct: 443 GWQQPNVPTLHLPGSSLQSSRLRTSLSARDMPADDYSLMQDIDS--QLINDL-CYS--RI 497
Query: 197 SPISVGRSGRSKTLTPXXXXXXXXXXXXXXPRFSDHTAASVFSPTHKSAVLNQF-QQQQS 21
+ + R+K+L P PR+S+ +FSP+HK+A LNQF QQQQ+
Sbjct: 498 GSSTGNHTSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFSPSHKAAFLNQFQQQQQA 557
Query: 20 MLSPIN 3
+LSPIN
Sbjct: 558 LLSPIN 563
Score = 82 bits (201), Expect = 7e-015
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = -3
Query: 1342 PEADVNFSCGLDQSTALHCAASGGSVNAMDIVKLLLSAGANPSCMDASGHRPIDVIVVHP 1163
P DVN CG D +TALHCAASGGS + ++ VKLLL+AGA+ DASG+RP DVI V P
Sbjct: 132 PSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYRPADVISVPP 191
Query: 1162 KLQSMHSVLEELL 1124
K+ L++LL
Sbjct: 192 KMFDAKIALQDLL 204
>sp|Q2QPW2|C3H67_ORYSJ Zinc finger CCCH domain-containing protein 67 OS=Oryza
sativa subsp. japonica GN=Os12g0515500 PE=2 SV=1
Length = 619
Score = 243 bits (619), Expect = 2e-063
Identities = 125/199 (62%), Positives = 131/199 (65%), Gaps = 11/199 (5%)
Frame = -2
Query: 917 PSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVP 738
PSLPDIKN RM+S KVR SRAYSHDWTECPFVH GENARRRDPRK+HYSCVP
Sbjct: 159 PSLPDIKNGAYASDDFRMYSFKVRACSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVP 218
Query: 737 CPEFRKGA-CRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPL 561
CPEF+KGA CRRG MCEYAHGVFE WLHPAQYRTRLCKDG C RRVCFFAHT DELRPL
Sbjct: 219 CPEFKKGAGCRRGDMCEYAHGVFESWLHPAQYRTRLCKDGVGCARRVCFFAHTPDELRPL 278
Query: 560 YVSTGSAVPSPRSS---ASGPTVMDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGIS 390
YVSTGSAVPSPR + A+ M M G S
Sbjct: 279 YVSTGSAVPSPRGALEMAAAAAAMGM------GLSSPGSSSFTPPLSPSAGGGGGGGGGS 332
Query: 389 QSSVAWP-HPNVPTLHLPG 336
AWP P+VP L LPG
Sbjct: 333 GGGGAWPQQPSVPALCLPG 351
>sp|Q688R3|C3H33_ORYSJ Zinc finger CCCH domain-containing protein 33 OS=Oryza
sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1
Length = 601
Score = 202 bits (513), Expect = 5e-051
Identities = 99/147 (67%), Positives = 110/147 (74%), Gaps = 8/147 (5%)
Frame = -2
Query: 914 SLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPC 735
+LPD+K+ RM+S KV+P SRAYSHDWTECPFVH GENARRRDPR++ YSCVPC
Sbjct: 199 TLPDLKSGLFSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPC 258
Query: 734 PEFRK-GACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELR--- 567
PEFRK G+CR+G CEYAHGVFECWLHPAQYRTRLCKD C RR+CFFAH DELR
Sbjct: 259 PEFRKGGSCRKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHKPDELRAVN 318
Query: 566 PLYVSTG--SAVPSPRSSASGPTVMDM 492
P VS G V SPRSS P +DM
Sbjct: 319 PSAVSVGMQPTVSSPRSSP--PNGLDM 343
>sp|Q84SL2|C3H50_ORYSJ Zinc finger CCCH domain-containing protein 50 OS=Oryza
sativa subsp. japonica GN=Os07g0568300 PE=2 SV=1
Length = 657
Score = 192 bits (487), Expect = 5e-048
Identities = 87/136 (63%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
Frame = -2
Query: 917 PSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVP 738
P+LPDIK+ RMF+ KVRP SRAYSHDWTECPFVH GENARRRDPRK Y+ VP
Sbjct: 220 PTLPDIKSSVYASDEFRMFAFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKHPYTAVP 279
Query: 737 CPEFRK-GACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPL 561
CP FR+ G C G CE++HGVFE WLHP+QYRTRLCK+G +C RR+CFFAH DELR +
Sbjct: 280 CPNFRRPGGCPSGDSCEFSHGVFESWLHPSQYRTRLCKEGAACARRICFFAHDEDELRHV 339
Query: 560 YVSTGSAVPSPRSSAS 513
++G+ + SPR+S+S
Sbjct: 340 PHNSGAGLLSPRASSS 355
Score = 70 bits (171), Expect = 2e-011
Identities = 38/72 (52%), Positives = 48/72 (66%)
Frame = -3
Query: 1333 DVNFSCGLDQSTALHCAASGGSVNAMDIVKLLLSAGANPSCMDASGHRPIDVIVVHPKLQ 1154
DVN G D +TALHCAASGGS NA+ +VKLLL+AGA+P+ D++G P DVI+ P
Sbjct: 96 DVNRRPGADGATALHCAASGGSRNAVAVVKLLLAAGADPATPDSAGRFPADVILAPPASP 155
Query: 1153 SMHSVLEELLSK 1118
LE LL +
Sbjct: 156 DALGDLEVLLGR 167
Score = 54 bits (128), Expect = 2e-006
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = -2
Query: 290 DIPPENLNLLRELDAQQQLLNELNCFSQPRPSP-ISVGRSGRSKTLTPXXXXXXXXXXXX 114
D ++L +L L+ + Q L L RP P +S G S R T+ P
Sbjct: 409 DAAVDDLGML--LEWESQYLGALCLPPSSRPQPRLSAGLSIR-PTIAPSNLEDMYASDMA 465
Query: 113 XXPRFSDHTAASVFSPTHKSAVLNQFQQQQSMLSPIN 3
PRF + SV+SP HKSA+LN+ QQ+ +LSP+N
Sbjct: 466 MSPRFPNDQGHSVYSPAHKSALLNKLHQQKGLLSPVN 502
>sp|Q9FU27|C3H2_ORYSJ Zinc finger CCCH domain-containing protein 2 OS=Oryza
sativa subsp. japonica GN=Os01g0192000 PE=2 SV=1
Length = 386
Score = 183 bits (464), Expect = 2e-045
Identities = 82/121 (67%), Positives = 91/121 (75%), Gaps = 4/121 (3%)
Frame = -2
Query: 869 RMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPCPEFRKGACRRGGMCE 690
RM+ KVR +R SHDWTECPF H GE ARRRDPRK+HYS CP+FRKG C+RG CE
Sbjct: 78 RMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDACE 137
Query: 689 YAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRSSASG 510
YAHGVFECWLHPA+YRT+ CKDGT+C RRVCFFAHT D+LR L SPRS AS
Sbjct: 138 YAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQS----SPRSVASS 193
Query: 509 P 507
P
Sbjct: 194 P 194
>sp|Q6L4N4|C3H35_ORYSJ Zinc finger CCCH domain-containing protein 35 OS=Oryza
sativa subsp. japonica GN=Os05g0195200 PE=2 SV=1
Length = 402
Score = 176 bits (445), Expect = 4e-043
Identities = 77/120 (64%), Positives = 88/120 (73%)
Frame = -2
Query: 869 RMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPCPEFRKGACRRGGMCE 690
RM+ KVR +R SHDWTECPF H GE ARRRDPR++ YS CP+FRKG C+RG CE
Sbjct: 79 RMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFRKGGCKRGDACE 138
Query: 689 YAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRSSASG 510
+AHGVFECWLHPA+YRT+ CKDGT+C RRVCFFAHT D+LR L S SPR G
Sbjct: 139 FAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPSQQQGSNSPRGCGGG 198
>sp|Q65X92|C3H37_ORYSJ Zinc finger CCCH domain-containing protein 37 OS=Oryza
sativa subsp. japonica GN=Os05g0525900 PE=2 SV=1
Length = 255
Score = 144 bits (363), Expect = 1e-033
Identities = 68/128 (53%), Positives = 83/128 (64%), Gaps = 8/128 (6%)
Frame = -2
Query: 866 MFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPCPEFRK---GACRRGGM 696
M+ KVR +RA SHDWT CP+ H GE ARRRDPR+ Y+ PCP+FR+ AC RG
Sbjct: 61 MYEFKVRRCARARSHDWTACPYAHPGEAARRRDPRRVAYTGEPCPDFRRRPGAACPRGST 120
Query: 695 CEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRSSA 516
C +AHG FE WLHP++YRTR C+ G +C RRVCFFAHT ELR GS SP S +
Sbjct: 121 CPFAHGTFELWLHPSRYRTRPCRAGVACRRRVCFFAHTAGELR-----AGSKEDSPLSLS 175
Query: 515 SGPTVMDM 492
T+ +
Sbjct: 176 PKSTLASL 183
>sp|Q94JI5|C3H10_ORYSJ Zinc finger CCCH domain-containing protein 10 OS=Oryza
sativa subsp. japonica GN=Os01g0738400 PE=2 SV=1
Length = 225
Score = 138 bits (346), Expect = 1e-031
Identities = 66/134 (49%), Positives = 82/134 (61%), Gaps = 9/134 (6%)
Frame = -2
Query: 866 MFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPCPEFR---KGACRRGGM 696
M+ KVR R+ +H+WT CP+ H GE ARRRDP Y+ PCP+FR + AC RG
Sbjct: 47 MYEFKVRRCPRSRAHEWTSCPYAHPGEAARRRDPSHVTYTGEPCPDFRVAARAACPRGSG 106
Query: 695 CEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRS-- 522
C +AHG FE WLHP++YRTR C+ G C R VCFFAH ELR + +A PSPRS
Sbjct: 107 CPFAHGTFETWLHPSRYRTRPCRSGMLCARPVCFFAHNDKELRIVGDDAAAATPSPRSPF 166
Query: 521 ----SASGPTVMDM 492
+ P+ MDM
Sbjct: 167 TTSEDSPPPSPMDM 180
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,984,440,304
Number of Sequences: 462764
Number of Extensions: 27984440304
Number of Successful Extensions: 276880518
Number of sequences better than 0.0: 0
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