BLASTX 7.6.2
Query= RU26017 /QuerySize=833
(832 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6ICX4|PTBP3_ARATH Polypyrimidine tract-binding protein homol... 372 2e-102
sp|Q9MAC5|PTBP1_ARATH Polypyrimidine tract-binding protein homol... 149 2e-035
sp|P14866|HNRPL_HUMAN Heterogeneous nuclear ribonucleoprotein L ... 131 9e-030
sp|Q8R081|HNRPL_MOUSE Heterogeneous nuclear ribonucleoprotein L ... 131 9e-030
sp|Q921F4|HNRLL_MOUSE Heterogeneous nuclear ribonucleoprotein L-... 128 4e-029
sp|Q8WVV9|HNRLL_HUMAN Heterogeneous nuclear ribonucleoprotein L-... 126 2e-028
sp|Q9FGL9|PTBP2_ARATH Polypyrimidine tract-binding protein homol... 119 3e-026
sp|Q29099|PTBP1_PIG Polypyrimidine tract-binding protein 1 OS=Su... 113 2e-024
sp|Q8BHD7|ROD1_MOUSE Regulator of differentiation 1 OS=Mus muscu... 112 4e-024
sp|Q9Z118|ROD1_RAT Regulator of differentiation 1 OS=Rattus norv... 112 4e-024
sp|Q00438|PTBP1_RAT Polypyrimidine tract-binding protein 1 OS=Ra... 111 6e-024
sp|Q9UKA9|PTBP2_HUMAN Polypyrimidine tract-binding protein 2 OS=... 111 7e-024
sp|Q91Z31|PTBP2_MOUSE Polypyrimidine tract-binding protein 2 OS=... 111 7e-024
sp|Q66H20|PTBP2_RAT Polypyrimidine tract-binding protein 2 OS=Ra... 111 7e-024
sp|Q8WN55|PTBP1_BOVIN Polypyrimidine tract-binding protein 1 OS=... 110 1e-023
sp|P26599|PTBP1_HUMAN Polypyrimidine tract-binding protein 1 OS=... 110 1e-023
sp|P17225|PTBP1_MOUSE Polypyrimidine tract-binding protein 1 OS=... 110 1e-023
sp|O95758|ROD1_HUMAN Regulator of differentiation 1 OS=Homo sapi... 110 1e-023
>sp|Q6ICX4|PTBP3_ARATH Polypyrimidine tract-binding protein homolog 3
OS=Arabidopsis thaliana GN=At1g43190 PE=2 SV=1
Length = 432
Score = 372 bits (954), Expect = 2e-102
Identities = 184/230 (80%), Positives = 203/230 (88%), Gaps = 1/230 (0%)
Frame = +2
Query: 143 MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQF 322
M E SKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQAL+QMQD ++AVSALQF
Sbjct: 1 MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60
Query: 323 YANVQPAVRGRNVYVQFSPHQELTTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQV 502
+ NVQP +RGRNVYVQFS HQELTT+ QN GR DEPNRILLVT+HHMLYPITV+VLHQV
Sbjct: 61 FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV 120
Query: 503 FFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDEL 682
F P+GFVEK+VTFQKSAGFQALIQYQ +Q A +ARTALQGRNIYDGCCQLDIQFSNL+EL
Sbjct: 121 FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL 180
Query: 683 QVNYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGLQA-TGARAVGF 829
QVNYNN+RSRD+TNPNLP+EQKG+S P YGD+G Y A T A A F
Sbjct: 181 QVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAF 230
>sp|Q9MAC5|PTBP1_ARATH Polypyrimidine tract-binding protein homolog 1
OS=Arabidopsis thaliana GN=PTB PE=2 SV=1
Length = 399
Score = 149 bits (376), Expect = 2e-035
Identities = 90/225 (40%), Positives = 134/225 (59%), Gaps = 18/225 (8%)
Frame = +2
Query: 152 PSKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALIQMQDTAAAVSALQFY 325
PSKV+H+RN+ E E +L+ L + FG I TK + +NQA ++ D A+S + +Y
Sbjct: 15 PSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEFADLNQAISMVSYY 74
Query: 326 A-NVQPA-VRGRNVYVQFSPHQELTTMYQNAQGRGDEPNRILLVTVHHM-LYPITVEVLH 496
A + +PA +RG+ VY+Q+S E+ N Q GD P +LLVT + + ++++V+H
Sbjct: 75 ASSSEPAQIRGKTVYIQYSNRHEIV----NNQSPGDVPGNVLLVTFEGVESHEVSIDVIH 130
Query: 497 QVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNI-------YDGCCQLD 655
VF GFV KI TF+K+AGFQAL+Q+ ++A AAR+AL GR+I + G C L
Sbjct: 131 LVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSLR 190
Query: 656 IQFSNLDELQVNYNNERSRDFTNPNLPSEQKGK--SPQPGYGDSG 784
+ +S +L + + + RSRD+TNP LP Q S QP G G
Sbjct: 191 MSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADG 235
Score = 84 bits (206), Expect = 1e-015
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = +2
Query: 425 DEPNRILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAA 604
+ + +LL + +M Y +TV+VLH VF +G V+KI F+K+ QALIQY +A A
Sbjct: 239 ESQSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMA 298
Query: 605 RTALQGRNIYD-GCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPSEQKGKSP 760
+ AL+G IYD G C+L + +S +L V +++SRD+T P+L K P
Sbjct: 299 KEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGP 351
>sp|P14866|HNRPL_HUMAN Heterogeneous nuclear ribonucleoprotein L OS=Homo sapiens
GN=HNRNPL PE=1 SV=2
Length = 589
Score = 131 bits (327), Expect = 9e-030
Identities = 76/224 (33%), Positives = 127/224 (56%), Gaps = 10/224 (4%)
Frame = +2
Query: 146 TEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFY 325
T S V+H+R + + E DL++ Q FG I+ +V++ K QAL++ +D A +A+ +
Sbjct: 98 TPASPVVHIRGLIDGVVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNYA 157
Query: 326 ANVQPAVRGRNVYVQFSPHQELTTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQVF 505
A+ Q + G +V +S Q+++ + R N +LL T+ + +Y IT +VL+ +
Sbjct: 158 ADNQIYIAGHPAFVNYSTSQKISRPGDSDDSR--SVNSVLLFTILNPIYSITTDVLYTIC 215
Query: 506 FPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDELQ 685
P G V++IV F+K+ G QA++++ S QSA A+ +L G +IY GCC L I+++ L
Sbjct: 216 NPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPTRLN 274
Query: 686 VNYNNERSRDFTNPNLPSE-QKGKSPQ------PGYGDSGGMYG 796
V N++ + D+TNPNL + G +P P GD YG
Sbjct: 275 VFKNDQDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYG 318
>sp|Q8R081|HNRPL_MOUSE Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus
GN=Hnrnpl PE=1 SV=2
Length = 586
Score = 131 bits (327), Expect = 9e-030
Identities = 76/224 (33%), Positives = 127/224 (56%), Gaps = 10/224 (4%)
Frame = +2
Query: 146 TEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFY 325
T S V+H+R + + E DL++ Q FG I+ +V++ K QAL++ +D A +A+ +
Sbjct: 95 TPASPVVHIRGLIDGVVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNYA 154
Query: 326 ANVQPAVRGRNVYVQFSPHQELTTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQVF 505
A+ Q + G +V +S Q+++ + R N +LL T+ + +Y IT +VL+ +
Sbjct: 155 ADNQIYIAGHPAFVNYSTSQKISRPGDSDDSR--SVNSVLLFTILNPIYSITTDVLYTIC 212
Query: 506 FPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDELQ 685
P G V++IV F+K+ G QA++++ S QSA A+ +L G +IY GCC L I+++ L
Sbjct: 213 NPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPTRLN 271
Query: 686 VNYNNERSRDFTNPNLPSE-QKGKSPQ------PGYGDSGGMYG 796
V N++ + D+TNPNL + G +P P GD YG
Sbjct: 272 VFKNDQDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYG 315
>sp|Q921F4|HNRLL_MOUSE Heterogeneous nuclear ribonucleoprotein L-like OS=Mus
musculus GN=Hnrpll PE=1 SV=3
Length = 591
Score = 128 bits (321), Expect = 4e-029
Identities = 71/206 (34%), Positives = 120/206 (58%), Gaps = 9/206 (4%)
Frame = +2
Query: 155 SKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYANV 334
S V+HVR + + E DL++ + FG I ++M+ K QAL++ ++ +A + F A+V
Sbjct: 124 SPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADV 183
Query: 335 QPAVRGRNVYVQFSPHQELTTMYQNAQGRGDEP---NRILLVTVHHMLYPITVEVLHQVF 505
+ G+ + +S + +T G D+P N++LL+++ + LYPITV+VL+ V
Sbjct: 184 PVYIAGQQAFFNYSTSKRIT-----RPGNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVC 238
Query: 506 FPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDELQ 685
P G V++IV F+++ G QA+++++S A A+ AL G +IY GCC L I+++ L
Sbjct: 239 NPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADIYAGCCTLKIEYARPTRLN 297
Query: 686 VNYNNERSRDFTNPNLPSEQKGKSPQ 763
V N+ S D+T P L +GK Q
Sbjct: 298 VIRNDNDSWDYTKPYLGRRDRGKGRQ 323
>sp|Q8WVV9|HNRLL_HUMAN Heterogeneous nuclear ribonucleoprotein L-like OS=Homo
sapiens GN=HNRPLL PE=1 SV=1
Length = 542
Score = 126 bits (315), Expect = 2e-028
Identities = 70/206 (33%), Positives = 119/206 (57%), Gaps = 9/206 (4%)
Frame = +2
Query: 155 SKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYANV 334
S V+HVR + + E DL++ + FG I ++M+ K QAL++ ++ +A + F A+
Sbjct: 75 SPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADE 134
Query: 335 QPAVRGRNVYVQFSPHQELTTMYQNAQGRGDEP---NRILLVTVHHMLYPITVEVLHQVF 505
+ G+ + +S + +T G D+P N++LL+++ + LYPITV+VL+ V
Sbjct: 135 PVYIAGQQAFFNYSTSKRIT-----RPGNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVC 189
Query: 506 FPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDELQ 685
P G V++IV F+++ G QA+++++S A A+ AL G +IY GCC L I+++ L
Sbjct: 190 NPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADIYAGCCTLKIEYARPTRLN 248
Query: 686 VNYNNERSRDFTNPNLPSEQKGKSPQ 763
V N+ S D+T P L +GK Q
Sbjct: 249 VIRNDNDSWDYTKPYLGRRDRGKGRQ 274
>sp|Q9FGL9|PTBP2_ARATH Polypyrimidine tract-binding protein homolog 2
OS=Arabidopsis thaliana GN=At5g53180 PE=2 SV=1
Length = 429
Score = 119 bits (297), Expect = 3e-026
Identities = 68/165 (41%), Positives = 106/165 (64%), Gaps = 9/165 (5%)
Frame = +2
Query: 152 PSKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALIQMQDTAAAVSALQFY 325
PSKV+H+RN+ E +E +L++L +PFG + TK + +NQA I+ +D A+ + +Y
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFIEFEDLNQAIQMISYY 75
Query: 326 A-NVQPA-VRGRNVYVQFSPHQELTTMYQNAQGRGDEPNRILLVTVH-HMLYPITVEVLH 496
A + +PA VRG+ VY+Q+S QE+ N + D +LLVT+ ++++VLH
Sbjct: 76 ASSSEPAQVRGKTVYLQYSNRQEIV----NNKTTADVVGNVLLVTIEGDDARMVSIDVLH 131
Query: 497 QVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNI 631
VF GFV KI TF+K+AG+QAL+Q+ ++A AA+ AL GR+I
Sbjct: 132 LVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSI 176
Score = 101 bits (251), Expect = 6e-021
Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 9/138 (6%)
Frame = +2
Query: 416 GRGDEP-NRILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQS 592
G+ EP + +LL ++ +M Y +T++VLH VF G V+KI F K+ G QALIQY Q+
Sbjct: 236 GKKMEPESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQT 295
Query: 593 AVAARTALQGRNIYD-GCCQLDIQFSNLDELQVNYNNERSRDFTNPNLP---SEQKGKSP 760
AV A+ AL+G IYD G C+L I +S +L + NN+RSRD+T PN P +Q ++P
Sbjct: 296 AVVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNP 355
Query: 761 QPG----YGDSGGMYGLQ 802
G Y +GG + Q
Sbjct: 356 YAGNPQQYHAAGGSHHQQ 373
>sp|Q29099|PTBP1_PIG Polypyrimidine tract-binding protein 1 OS=Sus scrofa
GN=PTBP1 PE=2 SV=1
Length = 557
Score = 113 bits (281), Expect = 2e-024
Identities = 58/132 (43%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +2
Query: 440 ILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQ 619
+L + V ++ YP+T++VLHQ+F G V KI+TF K+ FQAL+QY SA A+ +L
Sbjct: 183 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLD 242
Query: 620 GRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGL 799
G+NIY+ CC L I FS L L V YNN++SRD+T P+LPS S + G G+
Sbjct: 243 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAPGI 302
Query: 800 QATGARA-VGFP 832
+ A GFP
Sbjct: 303 MSASPYAGAGFP 314
Score = 84 bits (206), Expect = 1e-015
Identities = 38/90 (42%), Positives = 60/90 (66%)
Frame = +2
Query: 152 PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYAN 331
PS+VIH+R + +++E +++ L PFG +T L+ML+ KNQA I+M AA + + +Y +
Sbjct: 57 PSRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTS 116
Query: 332 VQPAVRGRNVYVQFSPHQELTTMYQNAQGR 421
V P +RG+ +Y+QFS H+EL T Q R
Sbjct: 117 VTPVLRGQPIYIQFSNHKELKTDSSPNQAR 146
>sp|Q8BHD7|ROD1_MOUSE Regulator of differentiation 1 OS=Mus musculus GN=Rod1
PE=2 SV=1
Length = 523
Score = 112 bits (278), Expect = 4e-024
Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 1/131 (0%)
Frame = +2
Query: 440 ILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQ 619
+L + + ++ YP+T+EVLHQ+F G V KI+TF K+ FQAL+QY +A A+ AL
Sbjct: 152 VLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALD 211
Query: 620 GRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGL 799
G+NIY+ CC L I FS L L V YNN++SRDFT +LP+ S +P + G G+
Sbjct: 212 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGI 271
Query: 800 QATG-ARAVGF 829
++ A A GF
Sbjct: 272 MSSPYAGAAGF 282
>sp|Q9Z118|ROD1_RAT Regulator of differentiation 1 OS=Rattus norvegicus GN=Rod1
PE=2 SV=1
Length = 523
Score = 112 bits (278), Expect = 4e-024
Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 1/131 (0%)
Frame = +2
Query: 440 ILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQ 619
+L + + ++ YP+T+EVLHQ+F G V KI+TF K+ FQAL+QY +A A+ AL
Sbjct: 152 VLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALD 211
Query: 620 GRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGL 799
G+NIY+ CC L I FS L L V YNN++SRDFT +LP+ S +P + G G+
Sbjct: 212 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGI 271
Query: 800 QATG-ARAVGF 829
++ A A GF
Sbjct: 272 MSSPYAGAAGF 282
>sp|Q00438|PTBP1_RAT Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus
GN=Ptbp1 PE=1 SV=1
Length = 555
Score = 111 bits (277), Expect = 6e-024
Identities = 56/131 (42%), Positives = 78/131 (59%)
Frame = +2
Query: 440 ILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQ 619
+L + V ++ YP+T++VLHQ+F G V KI+TF K+ FQAL+QY SA A+ +L
Sbjct: 182 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLD 241
Query: 620 GRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGL 799
G+NIY+ CC L I FS L L V YNN++SRD+T P+LPS S + G G+
Sbjct: 242 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAPGI 301
Query: 800 QATGARAVGFP 832
+ A P
Sbjct: 302 MSASPYAGAVP 312
Score = 84 bits (207), Expect = 7e-016
Identities = 39/90 (43%), Positives = 60/90 (66%)
Frame = +2
Query: 152 PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYAN 331
PS+VIHVR + +++E +++ L PFG +T L+ML+ KNQA I+M AA + + +Y +
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTEEAANTMVNYYTS 115
Query: 332 VQPAVRGRNVYVQFSPHQELTTMYQNAQGR 421
V P +RG+ +Y+QFS H+EL T Q R
Sbjct: 116 VAPVLRGQPIYIQFSNHKELKTDSSPNQAR 145
>sp|Q9UKA9|PTBP2_HUMAN Polypyrimidine tract-binding protein 2 OS=Homo sapiens
GN=PTBP2 PE=1 SV=1
Length = 531
Score = 111 bits (276), Expect = 7e-024
Identities = 55/116 (47%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Frame = +2
Query: 392 TTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALI 571
TT+ ++A P +L + + +M YP+T++VLHQ+F G V KI+TF K+ FQAL+
Sbjct: 166 TTVSESAVTPAQSP--VLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALL 223
Query: 572 QYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPS 739
QY +A A+ AL G+NIY+ CC L I FS L L V YNN++SRD+T P+LPS
Sbjct: 224 QYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPS 279
Score = 78 bits (190), Expect = 7e-014
Identities = 34/91 (37%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Frame = +2
Query: 152 PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYAN 331
PS+V+H+R + E++E +++ L PFG +T ++ML+ KNQA +++ AA++ + +Y+
Sbjct: 57 PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSA 116
Query: 332 VQPAVRGRNVYVQFSPHQEL---TTMYQNAQ 415
V P +R + +Y+Q+S H+EL T+ Q AQ
Sbjct: 117 VTPHLRNQPIYIQYSNHKELKTDNTLNQRAQ 147
>sp|Q91Z31|PTBP2_MOUSE Polypyrimidine tract-binding protein 2 OS=Mus musculus
GN=Ptbp2 PE=1 SV=2
Length = 531
Score = 111 bits (276), Expect = 7e-024
Identities = 55/116 (47%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Frame = +2
Query: 392 TTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALI 571
TT+ ++A P +L + + +M YP+T++VLHQ+F G V KI+TF K+ FQAL+
Sbjct: 166 TTVSESAVTPAQSP--VLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALL 223
Query: 572 QYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPS 739
QY +A A+ AL G+NIY+ CC L I FS L L V YNN++SRD+T P+LPS
Sbjct: 224 QYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPS 279
Score = 78 bits (190), Expect = 7e-014
Identities = 34/91 (37%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Frame = +2
Query: 152 PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYAN 331
PS+V+H+R + E++E +++ L PFG +T ++ML+ KNQA +++ AA++ + +Y+
Sbjct: 57 PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSA 116
Query: 332 VQPAVRGRNVYVQFSPHQEL---TTMYQNAQ 415
V P +R + +Y+Q+S H+EL T+ Q AQ
Sbjct: 117 VTPHLRNQPIYIQYSNHKELKTDNTLNQRAQ 147
>sp|Q66H20|PTBP2_RAT Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus
GN=Ptbp2 PE=2 SV=1
Length = 531
Score = 111 bits (276), Expect = 7e-024
Identities = 55/116 (47%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Frame = +2
Query: 392 TTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALI 571
TT+ ++A P +L + + +M YP+T++VLHQ+F G V KI+TF K+ FQAL+
Sbjct: 166 TTVSESAVTPAQSP--VLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALL 223
Query: 572 QYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPS 739
QY +A A+ AL G+NIY+ CC L I FS L L V YNN++SRD+T P+LPS
Sbjct: 224 QYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPS 279
Score = 78 bits (190), Expect = 7e-014
Identities = 34/91 (37%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Frame = +2
Query: 152 PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYAN 331
PS+V+H+R + E++E +++ L PFG +T ++ML+ KNQA +++ AA++ + +Y+
Sbjct: 57 PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSA 116
Query: 332 VQPAVRGRNVYVQFSPHQEL---TTMYQNAQ 415
V P +R + +Y+Q+S H+EL T+ Q AQ
Sbjct: 117 VTPHLRNQPIYIQYSNHKELKTDNTLNQRAQ 147
>sp|Q8WN55|PTBP1_BOVIN Polypyrimidine tract-binding protein 1 OS=Bos taurus
GN=PTBP1 PE=2 SV=1
Length = 531
Score = 110 bits (274), Expect = 1e-023
Identities = 51/100 (51%), Positives = 70/100 (70%)
Frame = +2
Query: 440 ILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQ 619
+L + V ++ YP+T++VLHQ+F G V KI+TF K+ FQAL+QY SA A+ +L
Sbjct: 183 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLD 242
Query: 620 GRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPS 739
G+NIY+ CC L I FS L L V YNN++SRD+T P+LPS
Sbjct: 243 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS 282
Score = 84 bits (205), Expect = 1e-015
Identities = 38/90 (42%), Positives = 60/90 (66%)
Frame = +2
Query: 152 PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYAN 331
PS+VIH+R + +++E +++ L PFG +T L+ML+ KNQA I+M AA + + +Y +
Sbjct: 57 PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTEEAANTMVNYYTS 116
Query: 332 VQPAVRGRNVYVQFSPHQELTTMYQNAQGR 421
V P +RG+ +Y+QFS H+EL T Q R
Sbjct: 117 VTPVLRGQPIYIQFSNHKELKTDSSPNQAR 146
>sp|P26599|PTBP1_HUMAN Polypyrimidine tract-binding protein 1 OS=Homo sapiens
GN=PTBP1 PE=1 SV=1
Length = 531
Score = 110 bits (274), Expect = 1e-023
Identities = 51/100 (51%), Positives = 70/100 (70%)
Frame = +2
Query: 440 ILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQ 619
+L + V ++ YP+T++VLHQ+F G V KI+TF K+ FQAL+QY SA A+ +L
Sbjct: 183 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLD 242
Query: 620 GRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPS 739
G+NIY+ CC L I FS L L V YNN++SRD+T P+LPS
Sbjct: 243 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS 282
Score = 83 bits (204), Expect = 2e-015
Identities = 38/90 (42%), Positives = 60/90 (66%)
Frame = +2
Query: 152 PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYAN 331
PS+VIH+R + +++E +++ L PFG +T L+ML+ KNQA I+M AA + + +Y +
Sbjct: 57 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTS 116
Query: 332 VQPAVRGRNVYVQFSPHQELTTMYQNAQGR 421
V P +RG+ +Y+QFS H+EL T Q R
Sbjct: 117 VTPVLRGQPIYIQFSNHKELKTDSSPNQAR 146
>sp|P17225|PTBP1_MOUSE Polypyrimidine tract-binding protein 1 OS=Mus musculus
GN=Ptbp1 PE=1 SV=2
Length = 527
Score = 110 bits (274), Expect = 1e-023
Identities = 51/100 (51%), Positives = 70/100 (70%)
Frame = +2
Query: 440 ILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQ 619
+L + V ++ YP+T++VLHQ+F G V KI+TF K+ FQAL+QY SA A+ +L
Sbjct: 182 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLD 241
Query: 620 GRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPS 739
G+NIY+ CC L I FS L L V YNN++SRD+T P+LPS
Sbjct: 242 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS 281
Score = 84 bits (206), Expect = 1e-015
Identities = 37/82 (45%), Positives = 58/82 (70%)
Frame = +2
Query: 152 PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYAN 331
PS+VIHVR + +++E +++ L PFG +T L+ML+ KNQA I+M AA + + +Y +
Sbjct: 56 PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTS 115
Query: 332 VQPAVRGRNVYVQFSPHQELTT 397
V P +RG+ +Y+QFS H+EL T
Sbjct: 116 VAPVLRGQPIYIQFSNHKELKT 137
>sp|O95758|ROD1_HUMAN Regulator of differentiation 1 OS=Homo sapiens GN=ROD1
PE=1 SV=2
Length = 552
Score = 110 bits (274), Expect = 1e-023
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Frame = +2
Query: 440 ILLVTVHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQ 619
+L + + ++ YP+T+EVLHQ+F G V KI+TF K+ FQAL+QY +A A+ AL
Sbjct: 181 VLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALD 240
Query: 620 GRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYG- 796
G+NIY+ CC L I FS L L V YNN++SRDFT +LP+ S +P + G G
Sbjct: 241 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGI 300
Query: 797 LQATGARAVGF 829
+ + A A GF
Sbjct: 301 ISSPYAGAAGF 311
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,984,440,304
Number of Sequences: 462764
Number of Extensions: 27984440304
Number of Successful Extensions: 276880518
Number of sequences better than 0.0: 0
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