BLASTX 7.6.2
Query= RU26512 /QuerySize=572
(571 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O81488|Y5621_ARATH PHD finger protein At5g26210 OS=Arabidopsi... 132 2e-030
sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF3... 64 7e-010
sp|Q6BER5|NU301_CAEEL Nucleosome-remodeling factor subunit NURF3... 53 1e-006
sp|Q6ZMT4|JHD1D_HUMAN JmjC domain-containing histone demethylati... 50 6e-006
sp|Q3UWM4|JHD1D_MOUSE JmjC domain-containing histone demethylati... 50 8e-006
>sp|O81488|Y5621_ARATH PHD finger protein At5g26210 OS=Arabidopsis thaliana
GN=At5g26210 PE=1 SV=2
Length = 255
Score = 132 bits (330), Expect = 2e-030
Identities = 66/106 (62%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
Frame = -2
Query: 570 AVSNNSIHKPKSSSRGRGSEP-GKYSKMLPK----XXXXXXXXXXXXXXXXTMCGSCGES 406
+VSNNS ++ KSSS+ RGSE K+SK PK T CG+CGES
Sbjct: 150 SVSNNSSNRSKSSSK-RGSESRAKFSKPEPKDDEEEEEEGVEEEDEDEQGETQCGACGES 208
Query: 405 YAADEFWICCDICEKWFHGKCVKITPARAEHIKHYKCPACSNKRMR 268
YAADEFWICCD+CE WFHGKCVKITPARAEHIK YKCP+CSNKR R
Sbjct: 209 YAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 254
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301
OS=Drosophila melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 64 bits (153), Expect = 7e-010
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = -2
Query: 420 SCGESYAADEFWICCDICEKWFHGKCVKITPARAEHIKHYKCPACSNK 277
SC + Y +F+ICCD C+ WFHG+CV I + AE I Y CP C K
Sbjct: 2499 SCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRK 2546
>sp|Q6BER5|NU301_CAEEL Nucleosome-remodeling factor subunit NURF301-like
OS=Caenorhabditis elegans GN=nurf-1 PE=1 SV=1
Length = 2266
Score = 53 bits (125), Expect = 1e-006
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2
Query: 417 CGESYAADEFWICCDICEKWFHGKCVKITPARAEHIKHYKCPACSNK 277
C + Y +F++ CD C+ WFH +CV T A AE Y CPAC+ +
Sbjct: 2036 CQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTRE 2082
>sp|Q6ZMT4|JHD1D_HUMAN JmjC domain-containing histone demethylation protein 1D
OS=Homo sapiens GN=JHDM1D PE=2 SV=2
Length = 941
Score = 50 bits (119), Expect = 6e-006
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = -2
Query: 417 CGESYAADEFWICCDICEKWFHGKCVKITPARAEHIKHYKCPACS 283
C + Y + F I CDIC+ WFHG CV + A I Y CP C+
Sbjct: 42 CRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCA 86
>sp|Q3UWM4|JHD1D_MOUSE JmjC domain-containing histone demethylation protein 1D
OS=Mus musculus GN=Jhdm1d PE=2 SV=2
Length = 940
Score = 50 bits (118), Expect = 8e-006
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -2
Query: 417 CGESYAADEFWICCDICEKWFHGKCVKITPARAEHIKHYKCPACS 283
C + Y + F I CD+C+ WFHG CV + A I Y CP C+
Sbjct: 42 CRQPYDVNRFMIECDVCKDWFHGSCVGVEEHHAVDIDLYHCPDCA 86
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,692,869,797
Number of Sequences: 462764
Number of Extensions: 28692869797
Number of Successful Extensions: 288841067
Number of sequences better than 0.0: 0
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