BLASTX 7.6.2
Query= RU26902 /QuerySize=504
(503 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1 112 9e-025
sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1 106 9e-023
sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1 92 1e-018
sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=M... 92 1e-018
sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE... 92 1e-018
sp|Q75B82|NHP6_ASHGO Non-histone chromosomal protein 6 OS=Ashbya... 57 6e-008
sp|Q5B995|NHP6_EMENI Non-histone chromosomal protein 6 OS=Emeric... 54 4e-007
sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1 OS=Vicia faba G... 54 5e-007
sp|Q6CVH3|NHP6_KLULA Non-histone chromosomal protein 6 OS=Kluyve... 52 1e-006
sp|Q6CC79|NHP6_YARLI Non-histone chromosomal protein 6 OS=Yarrow... 52 2e-006
sp|P11632|NHP6A_YEAST Non-histone chromosomal protein 6A OS=Sacc... 51 3e-006
sp|P07746|HMGT_ONCMY High mobility group-T protein OS=Oncorhynch... 50 7e-006
sp|Q9UVL1|NHP6_CANAL Non-histone chromosomal protein 6 OS=Candid... 49 1e-005
>sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1
Length = 152
Score = 112 bits (280), Expect = 9e-025
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +3
Query: 273 VFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVY 452
VFMEEFR+ + KEHP NK+V+AVGKA G KWK++SDAEKAPY AK+EKRKVEY KNM Y
Sbjct: 53 VFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAY 112
Query: 453 NKKQAEGDNG 482
NKKQAEG G
Sbjct: 113 NKKQAEGPTG 122
>sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1
Length = 144
Score = 106 bits (263), Expect = 9e-023
Identities = 48/67 (71%), Positives = 57/67 (85%)
Frame = +3
Query: 273 VFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVY 452
VFME+FR+ YK++HPNNKSVA VGKAGG+KWK L+ AEKAP+ +KAEKRK EY KN+ Y
Sbjct: 45 VFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAY 104
Query: 453 NKKQAEG 473
NKKQA G
Sbjct: 105 NKKQAAG 111
>sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1
Length = 149
Score = 92 bits (228), Expect = 1e-018
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +3
Query: 273 VFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVY 452
VFM +FRE+YKK+HPNNKSVAAVGKA GE+WKSLS+ EKAPY +A K+K EY + Y
Sbjct: 54 VFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAY 113
Query: 453 NKK 461
NKK
Sbjct: 114 NKK 116
>sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1
Length = 157
Score = 92 bits (228), Expect = 1e-018
Identities = 42/71 (59%), Positives = 57/71 (80%)
Frame = +3
Query: 255 ACECLLVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYN 434
A VFMEEFR+++K+++P NKSVAAVGKA G++WKSLS+++KAPY AKA K K+EYN
Sbjct: 44 APSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYN 103
Query: 435 KNMDVYNKKQA 467
K + YNK ++
Sbjct: 104 KAIAAYNKGES 114
>sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1
Length = 161
Score = 92 bits (227), Expect = 1e-018
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +3
Query: 255 ACECLLVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYN 434
A VFM EFRE++K+++P NKSVAAVGKA GE+WKSLS++EKAPY AKA K K EYN
Sbjct: 45 APSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYN 104
Query: 435 KNMDVYNKKQA 467
K + YNK ++
Sbjct: 105 KAIAAYNKGES 115
>sp|Q75B82|NHP6_ASHGO Non-histone chromosomal protein 6 OS=Ashbya gossypii
GN=NHP6 PE=3 SV=1
Length = 94
Score = 57 bits (135), Expect = 6e-008
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 255 ACECLLVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYN 434
A + F E R+ + E+P S VG+ GEKWK+LSD EK PY+AKAE K Y
Sbjct: 24 AMSAYMFFANENRDIVRAENP-GISFGQVGRVLGEKWKALSDDEKQPYEAKAEADKKRYE 82
Query: 435 KNMDVYNKKQA 467
++YN +A
Sbjct: 83 SEKELYNATKA 93
>sp|Q5B995|NHP6_EMENI Non-histone chromosomal protein 6 OS=Emericella nidulans
GN=nhp6 PE=3 SV=1
Length = 106
Score = 54 bits (128), Expect = 4e-007
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 270 LVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDV 449
+ F + R+K ++E+P S VGK GEKWKSLSD E+ PY+ KA K Y
Sbjct: 35 MFFANDNRDKVREENP-GISFGQVGKMLGEKWKSLSDKERKPYEDKAAADKKRYEDEKAA 93
Query: 450 YNKKQAEGD 476
Y +AE D
Sbjct: 94 YKAGEAEED 102
>sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1 OS=Vicia faba GN=SSRP1 PE=2
SV=1
Length = 642
Score = 54 bits (127), Expect = 5e-007
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +3
Query: 114 ENPRFSHERWEIQSRGSETVRYKVKDQKRWGEQASQEGWERSKQA*EACECLLVFMEEFR 293
E P + ++ S+ S + + K KD G + Q+ + A + F + R
Sbjct: 515 EKPAKKEPKKDLSSKASSS-KKKSKDADVDGVKKKQKKKKDPNAPKRALSGFMFFSQMER 573
Query: 294 EKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQ 464
E KK +P S VG+ GEKWK+LS EK PY+AKA+ K Y + Y Q
Sbjct: 574 ENLKKTNP-GISFTDVGRVLGEKWKNLSAEEKEPYEAKAQADKKRYKDEISGYKNPQ 629
>sp|Q6CVH3|NHP6_KLULA Non-histone chromosomal protein 6 OS=Kluyveromyces lactis
GN=NHP6 PE=3 SV=1
Length = 93
Score = 52 bits (124), Expect = 1e-006
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 ACECLLVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYN 434
A + F E R+ + E+P + VG+ GEKWK+L++ EKAPY+AKAE K Y
Sbjct: 21 ALSAYMFFANENRDIVRAENP-GITFGQVGRILGEKWKALNEDEKAPYEAKAEADKKRYE 79
Query: 435 KNMDVYNKKQAEGD 476
++Y +A+ +
Sbjct: 80 SEKELYIATKAQSE 93
>sp|Q6CC79|NHP6_YARLI Non-histone chromosomal protein 6 OS=Yarrowia lipolytica
GN=NHP6 PE=3 SV=1
Length = 103
Score = 52 bits (123), Expect = 2e-006
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 ACECLLVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYN 434
A + F + R+ + ++P + VGKA GEKWK+L+DAEK PY+ KA K Y
Sbjct: 28 ALSAYMFFANDNRDAIRADNP-GIAFGQVGKALGEKWKTLTDAEKVPYEEKATADKKRYE 86
Query: 435 KNMDVYNKKQAEGD 476
Y AE D
Sbjct: 87 DEKAAYKANAAEFD 100
>sp|P11632|NHP6A_YEAST Non-histone chromosomal protein 6A OS=Saccharomyces
cerevisiae GN=NHP6A PE=1 SV=1
Length = 93
Score = 51 bits (121), Expect = 3e-006
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 ACECLLVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYN 434
A + F E R+ + E+P + + VGK GEKWK+L+ EK PY+AKA+ K Y
Sbjct: 24 ALSAYMFFANENRDIVRSENP-DITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYE 82
Query: 435 KNMDVYN 455
++YN
Sbjct: 83 SEKELYN 89
>sp|P07746|HMGT_ONCMY High mobility group-T protein OS=Oncorhynchus mykiss PE=2
SV=2
Length = 204
Score = 50 bits (117), Expect = 7e-006
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 273 VFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVY 452
+F +FR + K E P S+ V K GEKW +L+ +K PY+ KA + K +Y K++ Y
Sbjct: 103 IFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAY 161
Query: 453 NKK 461
K
Sbjct: 162 RNK 164
>sp|Q9UVL1|NHP6_CANAL Non-histone chromosomal protein 6 OS=Candida albicans
GN=NHP6 PE=3 SV=1
Length = 92
Score = 49 bits (116), Expect = 1e-005
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 270 LVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDV 449
+ F E R+ + E+P S VGK GEKWK+L+ +K PY+ KAE K Y K
Sbjct: 27 MFFANENRDIVRAENP-GISFGQVGKLLGEKWKALNSEDKLPYENKAEADKKRYEKEKAE 85
Query: 450 YNKKQA 467
Y KK +
Sbjct: 86 YAKKNS 91
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,987,770,860
Number of Sequences: 462764
Number of Extensions: 30987770860
Number of Successful Extensions: 304546666
Number of sequences better than 0.0: 0
|