BLASTX 7.6.2
Query= RU27032 /QuerySize=841
(840 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9M9M9|NDUAC_ARATH Probable NADH dehydrogenase [ubiquinone] 1... 238 4e-062
sp|Q54MV7|NDUAC_DICDI NADH dehydrogenase [ubiquinone] 1 alpha su... 79 2e-014
sp|Q9N2W7|NDUAC_CAEEL Probable NADH dehydrogenase [ubiquinone] 1... 72 5e-012
sp|Q0MQ85|NDUAC_PONAB NADH dehydrogenase [ubiquinone] 1 alpha su... 71 6e-012
sp|Q0MQ86|NDUAC_GORGO NADH dehydrogenase [ubiquinone] 1 alpha su... 70 1e-011
sp|Q9UI09|NDUAC_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha su... 70 1e-011
sp|Q0MQ87|NDUAC_PANTR NADH dehydrogenase [ubiquinone] 1 alpha su... 70 1e-011
sp|O97725|NDUAC_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha su... 67 9e-011
sp|Q7TMF3|NDUAC_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha su... 64 1e-009
>sp|Q9M9M9|NDUAC_ARATH Probable NADH dehydrogenase [ubiquinone] 1 alpha
subcomplex subunit 12 OS=Arabidopsis thaliana GN=At3g03100 PE=1 SV=1
Length = 159
Score = 238 bits (606), Expect = 4e-062
Identities = 105/129 (81%), Positives = 116/129 (89%), Gaps = 1/129 (0%)
Frame = +2
Query: 155 GYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYEKL-DTQYGRHRWVEYVEKGRYNASQ 331
G+++CL DGNLLQTKIHNIGA LVGVDK GNKYY+KL DTQYGRHRWVEY K RYNASQ
Sbjct: 29 GFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLGDTQYGRHRWVEYASKDRYNASQ 88
Query: 332 VPPEWHGWLHYITDHTGDELLMLKPQRYHLEHKENFTGEGDEFIYHSKGHSLNPGQRDWT 511
VP EWHGWLH+ITDHTGDELL LKP+RY LEHKENF+GEGD +IYHSKGH+LNPGQ++WT
Sbjct: 89 VPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKENFSGEGDAYIYHSKGHTLNPGQKNWT 148
Query: 512 RYQPWEPTK 538
RYQ W PTK
Sbjct: 149 RYQSWVPTK 157
>sp|Q54MV7|NDUAC_DICDI NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Dictyostelium discoideum GN=ndufa12 PE=2 SV=2
Length = 138
Score = 79 bits (194), Expect = 2e-014
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +2
Query: 221 LVGVDKVGNKYYEKLDTQYGRHRWVEYVEKGRYNASQVPPEWHGWLHYITDHTGDELLML 400
LVGVDKVGN+YYE YGRHRWVEY + + + +PPE+H W+H+++D E+L
Sbjct: 34 LVGVDKVGNRYYENRQEIYGRHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPSEMLPF 93
Query: 401 KPQRYHLEHKENFTG 445
P Y H N TG
Sbjct: 94 SP-TYKRPHIANPTG 107
>sp|Q9N2W7|NDUAC_CAEEL Probable NADH dehydrogenase [ubiquinone] 1 alpha
subcomplex subunit 12 OS=Caenorhabditis elegans GN=Y94H6A.8 PE=2 SV=2
Length = 146
Score = 72 bits (174), Expect = 5e-012
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Frame = +2
Query: 221 LVGVDKVGNKYYEKLDTQYGRHRWVEYVEKG--RYNASQVPPEWHGWLHYITDHTGDELL 394
LVG D GN+YYE R+RWVE+ +K Y+A+QVPPEWH WLH+IT D+
Sbjct: 43 LVGSDNFGNRYYENNAYFVPRNRWVEFPDKVWLDYDATQVPPEWHSWLHHIT----DDAP 98
Query: 395 MLKP---QRYHLEHKEN 436
+KP Q + LEHKEN
Sbjct: 99 SVKPPPTQDWVLEHKEN 115
>sp|Q0MQ85|NDUAC_PONAB NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Pongo abelii GN=NDUFA12 PE=2 SV=1
Length = 145
Score = 71 bits (173), Expect = 6e-012
Identities = 43/117 (36%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Frame = +2
Query: 143 GEV*GYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYEKLDTQYGRHRWVEYVEKGR-- 316
G + GYL+ +T +G LVG DK GNKYYE +GRHRWV Y +
Sbjct: 18 GGLRGYLRV-----FFRTNDAKVGT-LVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGK 71
Query: 317 -----YNASQVPPEWHGWLHYITDHTGDELLMLKPQRYHLEHKENFTGEGDEFIYHS 472
+ S VPPEWH WLH ITD + + HK N TG ++++ +S
Sbjct: 72 NTFWDVDGSMVPPEWHHWLHSITDDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128
>sp|Q0MQ86|NDUAC_GORGO NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Gorilla gorilla gorilla GN=NDUFA12 PE=2 SV=1
Length = 145
Score = 70 bits (171), Expect = 1e-011
Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Frame = +2
Query: 143 GEV*GYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYEKLDTQYGRHRWVEYVEKGR-- 316
G + GYL+ +T +G LVG DK GNKYYE +GRHRWV Y +
Sbjct: 18 GGLRGYLRV-----FFRTNDAKVGT-LVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGK 71
Query: 317 -----YNASQVPPEWHGWLHYITDHTGDELLMLKPQRYHLEHKENFTGEGDEFIYHS 472
+ S VPPEWH WLH +TD + + HK N TG ++++ +S
Sbjct: 72 NTFWDVDGSMVPPEWHRWLHSMTDDPPTTKPLTARKFIWTNHKFNMTGTPEQYVPYS 128
>sp|Q9UI09|NDUAC_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Homo sapiens GN=NDUFA12 PE=1 SV=1
Length = 145
Score = 70 bits (170), Expect = 1e-011
Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Frame = +2
Query: 143 GEV*GYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYEKLDTQYGRHRWVEYVEKGR-- 316
G + GYL+ +T +G LVG DK GNKYYE +GRHRWV Y +
Sbjct: 18 GGLRGYLRV-----FFRTNDAKVGT-LVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGK 71
Query: 317 -----YNASQVPPEWHGWLHYITDHTGDELLMLKPQRYHLEHKENFTGEGDEFIYHS 472
+ S VPPEWH WLH +TD + + HK N TG ++++ +S
Sbjct: 72 NTFWDVDGSMVPPEWHRWLHSMTDDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128
>sp|Q0MQ87|NDUAC_PANTR NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Pan troglodytes GN=NDUFA12 PE=2 SV=1
Length = 145
Score = 70 bits (170), Expect = 1e-011
Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Frame = +2
Query: 143 GEV*GYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYEKLDTQYGRHRWVEYVEKGR-- 316
G + GYL+ +T +G LVG DK GNKYYE +GRHRWV Y +
Sbjct: 18 GGLRGYLRV-----FFRTNDAKVGT-LVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGK 71
Query: 317 -----YNASQVPPEWHGWLHYITDHTGDELLMLKPQRYHLEHKENFTGEGDEFIYHS 472
+ S VPPEWH WLH +TD + + HK N TG ++++ +S
Sbjct: 72 NTFWDVDGSMVPPEWHRWLHSMTDDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128
>sp|O97725|NDUAC_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Bos taurus GN=NDUFA12 PE=1 SV=1
Length = 145
Score = 67 bits (163), Expect = 9e-011
Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Frame = +2
Query: 143 GEV*GYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYEKLDTQYGRHRWVEYVEKGR-- 316
G + GYL+ L N ++ LVG DK GNKYYE +GRHRWV Y +
Sbjct: 18 GGLRGYLRVLFRANDVRV------GTLVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGK 71
Query: 317 -----YNASQVPPEWHGWLHYITDHTGDELLMLKPQRYHLEHKENFTGEGDEFIYHS 472
+ S VPPEWH WLH +TD + HK N +G +++ +S
Sbjct: 72 NTFWDVDGSMVPPEWHRWLHCMTDDPPTVKPPTARKFIWTNHKFNLSGTPQQYVPYS 128
>sp|Q7TMF3|NDUAC_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Mus musculus GN=Ndufa12 PE=1 SV=2
Length = 145
Score = 64 bits (153), Expect = 1e-009
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = +2
Query: 221 LVGVDKVGNKYYEKLDTQYGRHRWVEYVEKGR-------YNASQVPPEWHGWLHYITDHT 379
LVG DK GNKYYE +GRHRWV Y + + S VPPEWH WLH +TD
Sbjct: 38 LVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGKNTFWDVDGSMVPPEWHRWLHCMTDDP 97
Query: 380 GDELLMLKPQRYHLEHKENFTGEGDEFIYHS 472
+ HK N + ++++ +S
Sbjct: 98 PTTNPPTARKFIWTNHKFNVSATPEQYVPYS 128
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,987,770,860
Number of Sequences: 462764
Number of Extensions: 30987770860
Number of Successful Extensions: 304546666
Number of sequences better than 0.0: 0
|