BLASTX 7.6.2
Query= RU27607 /QuerySize=491
(490 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O22151|GOS12_ARATH Golgi SNARE 12 protein OS=Arabidopsis thal... 215 1e-055
sp|Q2TBU3|GOSR1_BOVIN Golgi SNAP receptor complex member 1 OS=Bo... 74 3e-013
sp|O08522|GOSR1_CRIGR Golgi SNAP receptor complex member 1 OS=Cr... 73 8e-013
sp|O88630|GOSR1_MOUSE Golgi SNAP receptor complex member 1 OS=Mu... 73 8e-013
sp|Q62931|GOSR1_RAT Golgi SNAP receptor complex member 1 OS=Ratt... 73 8e-013
sp|O95249|GOSR1_HUMAN Golgi SNAP receptor complex member 1 OS=Ho... 72 1e-012
sp|Q9VE50|GOSR1_DROME Probable 28 kDa Golgi SNARE protein OS=Dro... 70 7e-012
>sp|O22151|GOS12_ARATH Golgi SNARE 12 protein OS=Arabidopsis thaliana GN=GOS12
PE=1 SV=1
Length = 239
Score = 215 bits (547), Expect = 1e-055
Identities = 109/119 (91%), Positives = 114/119 (95%), Gaps = 1/119 (0%)
Frame = +3
Query: 132 MTDSSLELQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGGYVESGSPPVGSSRS 311
MT+SSL+LQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQ GGYV++GSP VGS RS
Sbjct: 1 MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQ-GGYVDTGSPTVGSGRS 59
Query: 312 WKSMEMEIQSLLEKLLDINDSMSRCAASATPATSVTQKLARHRDILHEFTQEFRRIKGN 488
WKSMEMEIQSLLEKLLDINDSMSRCAASA P TSVTQKLARHRDILHE+TQEFRRIKGN
Sbjct: 60 WKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGN 118
>sp|Q2TBU3|GOSR1_BOVIN Golgi SNAP receptor complex member 1 OS=Bos taurus
GN=GOSR1 PE=2 SV=1
Length = 250
Score = 74 bits (180), Expect = 3e-013
Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 13/120 (10%)
Frame = +3
Query: 168 WEELRREARKIEGDLDVKLSSYAKL-------GARFTQGGGYVESGSPPVGSS---RSWK 317
WE+LR++AR++E +LD+KL S++KL AR + Y +P + S R ++
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDRYSSDTTPLLNGSSQDRMFE 68
Query: 318 SMEMEIQSLLEKLLDINDSMSRCAASA-TPA--TSVTQKLARHRDILHEFTQEFRRIKGN 488
+M +EI+ LL +L IND M+ +SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 69 TMAIEIEQLLARLTGINDKMAEYTSSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
>sp|O08522|GOSR1_CRIGR Golgi SNAP receptor complex member 1 OS=Cricetulus
griseus GN=GOSR1 PE=2 SV=1
Length = 250
Score = 73 bits (177), Expect = 8e-013
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = +3
Query: 168 WEELRREARKIEGDLDVKLSSYAKLGARFT----QGGG---YVESGSPPVGSS---RSWK 317
WE+LR++AR++E +LD+KL S++KL ++ + GG Y +P + S R ++
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFE 68
Query: 318 SMEMEIQSLLEKLLDINDSMSRCAASA-TPA--TSVTQKLARHRDILHEFTQEFRRIKGN 488
+M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 69 TMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
>sp|O88630|GOSR1_MOUSE Golgi SNAP receptor complex member 1 OS=Mus musculus
GN=Gosr1 PE=1 SV=1
Length = 250
Score = 73 bits (177), Expect = 8e-013
Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Frame = +3
Query: 168 WEELRREARKIEGDLDVKLSSYAKLGARFTQGGG-------YVESGSPPVGSS---RSWK 317
WE+LR++AR++E +LD+KL S +KL ++ G Y +P + S R ++
Sbjct: 9 WEDLRKQARQLENELDLKLVSSSKLCTSYSHSGSRDGGRDRYSSDTTPLLNGSSQDRMFE 68
Query: 318 SMEMEIQSLLEKLLDINDSMSRCAASA-TPA--TSVTQKLARHRDILHEFTQEFRRIKGN 488
+M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 69 TMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
>sp|Q62931|GOSR1_RAT Golgi SNAP receptor complex member 1 OS=Rattus norvegicus
GN=Gosr1 PE=1 SV=1
Length = 250
Score = 73 bits (177), Expect = 8e-013
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = +3
Query: 168 WEELRREARKIEGDLDVKLSSYAKLGARFT----QGGG---YVESGSPPVGSS---RSWK 317
WE+LR++AR++E +LD+KL S++KL ++ + GG Y +P + S R ++
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFE 68
Query: 318 SMEMEIQSLLEKLLDINDSMSRCAASA-TPA--TSVTQKLARHRDILHEFTQEFRRIKGN 488
+M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K N
Sbjct: 69 TMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
>sp|O95249|GOSR1_HUMAN Golgi SNAP receptor complex member 1 OS=Homo sapiens
GN=GOSR1 PE=1 SV=1
Length = 250
Score = 72 bits (175), Expect = 1e-012
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Frame = +3
Query: 162 SGWEELRREARKIEGDLDVKLSSYAKLGARFTQGG-------GYVESGSPPVGSS---RS 311
S WE+LR++AR++E +LD+KL S++KL ++ Y +P + S R
Sbjct: 7 SYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDRYSSDTTPLLNGSSQDRM 66
Query: 312 WKSMEMEIQSLLEKLLDINDSMSRCAASA-TPA--TSVTQKLARHRDILHEFTQEFRRIK 482
+++M +EI+ LL +L +ND M+ SA P+ ++ L RHRDIL ++T EF + K
Sbjct: 67 FETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTK 126
Query: 483 GN 488
N
Sbjct: 127 AN 128
>sp|Q9VE50|GOSR1_DROME Probable 28 kDa Golgi SNARE protein OS=Drosophila
melanogaster GN=Gos28 PE=2 SV=1
Length = 232
Score = 70 bits (169), Expect = 7e-012
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Frame = +3
Query: 162 SGWEELRREARKIEGDLDVKLSSYAKLGARFTQG--GGYVESGSPPVGSSRSWKSMEMEI 335
S ++ LR++AR +E ++D+KL +++K+GA G GG + P+ + S+ EI
Sbjct: 4 SSYDVLRKQARSLENEIDLKLVAFSKIGAGSGGGGSGGLGGVDTSPLLGEHVFDSLSEEI 63
Query: 336 QSLLEKLLDINDSMSRCAASATPATSVTQKLARHRDILHEFTQEFRRIKGN 488
+ +LEKL +N+SMS AS A Q RHR+IL + QEF +I N
Sbjct: 64 EQMLEKLSSLNESMSDLPASGAAAMHTLQ---RHREILQGYRQEFNKICAN 111
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,987,770,860
Number of Sequences: 462764
Number of Extensions: 30987770860
Number of Successful Extensions: 304546666
Number of sequences better than 0.0: 0
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