BLASTX 7.6.2
Query= RU29054 /QuerySize=240
(239 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE... 141 2e-033
sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3... 105 1e-022
sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3... 101 1e-021
sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5... 101 2e-021
sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4... 100 3e-021
sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4... 100 3e-021
sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3... 94 2e-019
sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Sacch... 78 1e-014
sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2... 77 2e-014
sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1... 76 4e-014
sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1... 76 4e-014
sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosacchar... 74 2e-013
sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPas... 72 5e-013
sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPas... 72 9e-013
sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosacchar... 70 3e-012
sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein ... 64 2e-010
sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein ... 63 3e-010
sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-de... 63 4e-010
sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-de... 63 4e-010
sp|P28370|SMCA1_HUMAN Probable global transcription activator SN... 62 6e-010
sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SN... 62 6e-010
sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein ... 62 7e-010
sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein ... 61 1e-009
sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase IS... 60 2e-009
sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain i... 59 8e-009
sp|Q5KHM0|INO80_CRYNE Putative DNA helicase INO80 OS=Cryptococcu... 58 1e-008
sp|Q9ULG1|INO80_HUMAN Putative DNA helicase INO80 complex homolo... 57 2e-008
sp|Q6ZPV2|INO80_MOUSE Putative DNA helicase INO80 complex homolo... 56 4e-008
sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces ... 56 5e-008
sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens... 55 7e-008
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 141 bits (353), Expect = 2e-033
Identities = 66/79 (83%), Positives = 75/79 (94%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
LEEFQEEFKDINQEEQISRLHK+LAPHLLRRVKKDVMK++PPKKELILR++LSS QKEYY
Sbjct: 476 LEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYY 535
Query: 58 KAILTRNYQILTRRGGGML 2
KAI TRNYQ+LT++GG +
Sbjct: 536 KAIFTRNYQVLTKKGGAQI 554
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 105 bits (260), Expect = 1e-022
Identities = 45/77 (58%), Positives = 64/77 (83%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
L+ FQ EF D+++EEQ+ RLH+IL PH+LRR+K DV+K +PPK E I+R+ELSS QK++Y
Sbjct: 463 LQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFY 522
Query: 58 KAILTRNYQILTRRGGG 8
K ILT+N++ L ++GGG
Sbjct: 523 KHILTKNFKALNQKGGG 539
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo
sapiens GN=CHD3 PE=1 SV=3
Length = 2000
Score = 101 bits (251), Expect = 1e-021
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P K ELI+R+ELS QK+YY
Sbjct: 937 LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYY 996
Query: 58 KAILTRNYQILTRRGGG 8
K ILTRN++ L RGGG
Sbjct: 997 KYILTRNFEALNSRGGG 1013
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo
sapiens GN=CHD5 PE=2 SV=1
Length = 1954
Score = 101 bits (249), Expect = 2e-021
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P K ELI+R+ELS QK+YY
Sbjct: 901 LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY 960
Query: 58 KAILTRNYQILTRRGGG 8
K ILTRN++ L +GGG
Sbjct: 961 KFILTRNFEALNSKGGG 977
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo
sapiens GN=CHD4 PE=1 SV=1
Length = 1912
Score = 100 bits (247), Expect = 3e-021
Identities = 47/77 (61%), Positives = 59/77 (76%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
LE F EEF DI +E+QI +LH +L PH+LRR+K DV K +P K ELI+R+ELS QK+YY
Sbjct: 927 LEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYY 986
Query: 58 KAILTRNYQILTRRGGG 8
K ILTRN++ L RGGG
Sbjct: 987 KYILTRNFEALNARGGG 1003
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus
musculus GN=Chd4 PE=1 SV=1
Length = 1915
Score = 100 bits (247), Expect = 3e-021
Identities = 47/77 (61%), Positives = 59/77 (76%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
LE F EEF DI +E+QI +LH +L PH+LRR+K DV K +P K ELI+R+ELS QK+YY
Sbjct: 920 LEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYY 979
Query: 58 KAILTRNYQILTRRGGG 8
K ILTRN++ L RGGG
Sbjct: 980 KYILTRNFEALNARGGG 996
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 94 bits (231), Expect = 2e-019
Identities = 42/77 (54%), Positives = 59/77 (76%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
LE F EF +I++E+QI +LH +L PH+LRR+K DV+ +P K+ELI+R+ELS+ QK+YY
Sbjct: 817 LESFTAEFSEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYY 876
Query: 58 KAILTRNYQILTRRGGG 8
K ILTRN+ L + GG
Sbjct: 877 KNILTRNFDALNVKNGG 893
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces
cerevisiae GN=CHD1 PE=1 SV=1
Length = 1468
Score = 78 bits (190), Expect = 1e-014
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = -2
Query: 235 EEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYK 56
+E E +D QEE I LH+ + P +LRR+KKDV K LP K E ILR+ELS Q EYYK
Sbjct: 568 QEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYK 627
Query: 55 AILTRNYQILTRRGGG 8
ILT+NY LT G
Sbjct: 628 NILTKNYSALTAGAKG 643
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo
sapiens GN=CHD2 PE=1 SV=2
Length = 1828
Score = 77 bits (189), Expect = 2e-014
Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = -2
Query: 235 EEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYK 56
E+F+E+ +E LHK+L P LLRRVKKDV K LP K E ILR+E+S+ QK+YYK
Sbjct: 672 EDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYK 730
Query: 55 AILTRNYQILTR 20
ILTRNY+ L +
Sbjct: 731 WILTRNYKALAK 742
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo
sapiens GN=CHD1 PE=1 SV=1
Length = 1709
Score = 76 bits (186), Expect = 4e-014
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -2
Query: 235 EEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYK 56
E+F+EE +E + LHK L P LLRRVKKDV K LP K E ILR+E+S+ QK+YYK
Sbjct: 669 EDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYK 727
Query: 55 AILTRNYQILTRRGGG 8
ILTRNY+ L++ G
Sbjct: 728 WILTRNYKALSKGSKG 743
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus
musculus GN=Chd1 PE=1 SV=2
Length = 1711
Score = 76 bits (186), Expect = 4e-014
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -2
Query: 235 EEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYK 56
E+F+EE +E + LHK L P LLRRVKKDV K LP K E ILR+E+S+ QK+YYK
Sbjct: 667 EDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYK 725
Query: 55 AILTRNYQILTRRGGG 8
ILTRNY+ L++ G
Sbjct: 726 WILTRNYKALSKGSKG 741
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe
GN=hrp3 PE=1 SV=1
Length = 1388
Score = 74 bits (180), Expect = 2e-013
Identities = 39/72 (54%), Positives = 48/72 (66%)
Frame = -2
Query: 235 EEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYK 56
EE E D QE I L + L P++LRR+KKDV K LP K E ILR+ELS Q +YK
Sbjct: 563 EEINLEAPDEEQEAYIRSLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYK 622
Query: 55 AILTRNYQILTR 20
ILTRNY++LT+
Sbjct: 623 NILTRNYRVLTQ 634
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain
OS=Oryza sativa subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 72 bits (176), Expect = 5e-013
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = -2
Query: 205 NQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKAILTRNYQIL 26
+Q+E + +LHK+L P LLRR+K DV K LPPKKE IL++ +S QK+YY+A+L ++ +++
Sbjct: 427 DQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVI 486
Query: 25 TRRG 14
G
Sbjct: 487 NAGG 490
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain
OS=Arabidopsis thaliana GN=At3g06400 PE=2 SV=2
Length = 1057
Score = 72 bits (174), Expect = 9e-013
Identities = 32/64 (50%), Positives = 47/64 (73%)
Frame = -2
Query: 205 NQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKAILTRNYQIL 26
+Q+E + +LHK+L P LLRR+K DV K LPPKKE IL++ +S QK+YYKA+L ++ + +
Sbjct: 385 DQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAV 444
Query: 25 TRRG 14
G
Sbjct: 445 NAGG 448
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe
GN=hrp1 PE=1 SV=1
Length = 1373
Score = 70 bits (169), Expect = 3e-012
Identities = 37/76 (48%), Positives = 47/76 (61%)
Frame = -2
Query: 235 EEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYK 56
+E + + QE I L + L P +LRR+KKDV K LP K E ILR+ELS Q E+YK
Sbjct: 579 DELNFDQPNAEQERDIRDLQERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYK 638
Query: 55 AILTRNYQILTRRGGG 8
ILT+NY+ LT G
Sbjct: 639 NILTKNYRALTGHTDG 654
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo
sapiens GN=CHD1L PE=1 SV=1
Length = 897
Score = 64 bits (153), Expect = 2e-010
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = -2
Query: 232 EFQEEFKDINQE-EQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYK 56
+F + ++DI +E E S LHK+L P LLRRVK +V ELP K E+++ +S+ QK+YYK
Sbjct: 232 DFIQRYQDIEKESESASELHKLLQPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYK 291
Query: 55 AILTRN 38
AIL ++
Sbjct: 292 AILMKD 297
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos
taurus GN=CHD1L PE=2 SV=1
Length = 897
Score = 63 bits (152), Expect = 3e-010
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -2
Query: 235 EEFQEEFKDINQE-EQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
E+F + ++DI +E E S L+K+L P LLRRVK +V ELP K E+++ +S+ QK+YY
Sbjct: 233 EDFVQRYQDIEKESESASELYKLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYY 292
Query: 58 KAILTRN 38
KAIL ++
Sbjct: 293 KAILMKD 299
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5
PE=1 SV=1
Length = 1052
Score = 63 bits (151), Expect = 4e-010
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = -2
Query: 208 INQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKAILTRNYQI 29
+ ++ + RLH +L P LLRR+K DV K LPPKKE+ + + LS Q+E+Y IL ++ I
Sbjct: 375 LGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI 434
Query: 28 LTRRG 14
L G
Sbjct: 435 LNSAG 439
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 OS=Mus musculus GN=Smarca5
PE=1 SV=1
Length = 1051
Score = 63 bits (151), Expect = 4e-010
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = -2
Query: 208 INQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKAILTRNYQI 29
+ ++ + RLH +L P LLRR+K DV K LPPKKE+ + + LS Q+E+Y IL ++ I
Sbjct: 374 LGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI 433
Query: 28 LTRRG 14
L G
Sbjct: 434 LNSAG 438
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo
sapiens GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 62 bits (150), Expect = 6e-010
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = -2
Query: 208 INQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKAILTRNYQI 29
+ ++ + RLH +L P LLRR+K DV K LPPKKE+ + + LS Q+E+Y IL ++ +
Sbjct: 378 LGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDV 437
Query: 28 LTRRG 14
L G
Sbjct: 438 LNSSG 442
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus
musculus GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 62 bits (150), Expect = 6e-010
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = -2
Query: 208 INQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKAILTRNYQI 29
+ ++ + RLH +L P LLRR+K DV K LPPKKE+ + + LS Q+E+Y IL ++ +
Sbjct: 382 LGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDV 441
Query: 28 LTRRG 14
L G
Sbjct: 442 LNSSG 446
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus
musculus GN=Chd1l PE=2 SV=1
Length = 900
Score = 62 bits (149), Expect = 7e-010
Identities = 31/67 (46%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -2
Query: 235 EEFQEEFKDINQE-EQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
E+F + ++DI +E + S LH++L P LLRRVK V ELP K E+++ +S+ QK+YY
Sbjct: 225 EDFVQRYQDIEKESKSASELHRLLQPFLLRRVKAQVATELPKKTEVVVYHGMSALQKKYY 284
Query: 58 KAILTRN 38
KAIL ++
Sbjct: 285 KAILMKD 291
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio
rerio GN=chd1l PE=2 SV=1
Length = 1026
Score = 61 bits (147), Expect = 1e-009
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -2
Query: 235 EEFQEEFKDINQEEQ-ISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
E+F + DI E + LH++L P LLRRVK +V ELP K EL++ LS+ QK YY
Sbjct: 220 EDFVNAYADIQTEPALVDELHQVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYY 279
Query: 58 KAILTRN 38
KAIL R+
Sbjct: 280 KAILMRD 286
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1
OS=Saccharomyces cerevisiae GN=ISW1 PE=1 SV=2
Length = 1129
Score = 60 bits (145), Expect = 2e-009
Identities = 30/73 (41%), Positives = 45/73 (61%)
Frame = -2
Query: 229 FQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKAI 50
F E + +Q++ + +LH +L P LLRR+K DV L PKKEL L + +SS QK++YK I
Sbjct: 385 FSSESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKI 444
Query: 49 LTRNYQILTRRGG 11
L ++ + G
Sbjct: 445 LEKDLDAVNGSNG 457
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1
OS=Caenorhabditis elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 59 bits (140), Expect = 8e-009
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = -2
Query: 190 ISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKAILTRNYQILTRRG 14
+ RLHK+L P LLRR+K DV K L PKKE+ + + LS Q+E+Y +L ++ I+ G
Sbjct: 333 VQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAG 391
>sp|Q5KHM0|INO80_CRYNE Putative DNA helicase INO80 OS=Cryptococcus neoformans
GN=INO80 PE=3 SV=1
Length = 1765
Score = 58 bits (139), Expect = 1e-008
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = -2
Query: 196 EQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKAILTR 41
EQ+ RLH IL P +LRRVKK V KEL K E+ L ++LS +Q+E YKA+ R
Sbjct: 1085 EQLKRLHMILKPFMLRRVKKHVQKELGDKIEIDLLVDLSQRQREIYKALRQR 1136
>sp|Q9ULG1|INO80_HUMAN Putative DNA helicase INO80 complex homolog 1 OS=Homo
sapiens GN=INO80 PE=1 SV=2
Length = 1556
Score = 57 bits (137), Expect = 2e-008
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = -2
Query: 232 EFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKA 53
E E K E Q+SRLH IL P +LRR+KKDV EL K E+++ +L+S+QK Y+A
Sbjct: 718 ESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQA 777
Query: 52 I 50
+
Sbjct: 778 L 778
>sp|Q6ZPV2|INO80_MOUSE Putative DNA helicase INO80 complex homolog 1 OS=Mus
musculus GN=Ino80 PE=2 SV=2
Length = 1559
Score = 56 bits (134), Expect = 4e-008
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = -2
Query: 232 EFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKA 53
E E K E Q+SRLH IL P +LRR+KKDV EL K E++ +L+S+QK Y+A
Sbjct: 720 ESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQKLLYQA 779
Query: 52 I 50
+
Sbjct: 780 L 780
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae
GN=STH1 PE=1 SV=1
Length = 1359
Score = 56 bits (133), Expect = 5e-008
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = -2
Query: 223 EEFKDINQEEQ---ISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKA 53
+E ++ +EE I RLHK+L P LLRR+KK+V K+LP K E +++ +LS Q++ Y+
Sbjct: 669 QEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQ 728
Query: 52 ILTRN 38
+L N
Sbjct: 729 MLKHN 733
>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1
SV=1
Length = 838
Score = 55 bits (132), Expect = 7e-008
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = -2
Query: 202 QEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYYKAILTR 41
++ + LH+IL P LLRR+K DV E+PPK+E+++ LS KQ+ +Y AI+ R
Sbjct: 433 EQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNR 486
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,987,770,860
Number of Sequences: 462764
Number of Extensions: 30987770860
Number of Successful Extensions: 304546666
Number of sequences better than 0.0: 0
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