BLASTX 7.6.2
Query= RU34112 /QuerySize=188
(187 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein ... 82 9e-016
sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein ... 54 2e-007
sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZF... 54 3e-007
>sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein 8 OS=Oryza
sativa subsp. japonica GN=Os01g0616400 PE=2 SV=2
Length = 462
Score = 82 bits (200), Expect = 9e-016
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = -2
Query: 186 GECKYGAQCRFHHPIDRPAVALSTTKPSQQENVKLTLAGLPRREGAVICVYYLKTGTCKY 7
G CK+ +C+FHHPIDR A S +E+V+LTLAGLPRRE AV+C +Y+KTG CK+
Sbjct: 380 GFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKF 439
Query: 6 G 4
G
Sbjct: 440 G 440
>sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein 5 OS=Oryza
sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1
Length = 466
Score = 54 bits (129), Expect = 2e-007
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = -2
Query: 186 GECKYGAQCRFHHPIDRPAVALSTTKPSQQENVKLTLAGLPRREGAVICVYYLKTGTCKY 7
G C YG CR++HP DR A A+ + A P R G +C YY+K GTCK+
Sbjct: 64 GACGYGENCRYNHPRDRAAAAVLNGGGKTTHS-----AEYPERPGQPVCEYYMKNGTCKF 118
Query: 6 GA 1
G+
Sbjct: 119 GS 120
>sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum
sativum PE=2 SV=1
Length = 417
Score = 54 bits (127), Expect = 3e-007
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 10/62 (16%)
Frame = -2
Query: 186 GECKYGAQCRFHHPIDRPAVALSTTKPSQQENVKLTLAGLPRREGAVICVYYLKTGTCKY 7
G C++GA CRF+HP +R +A++T + + P R G C YYLKTGTCK+
Sbjct: 43 GLCRFGATCRFNHPPNR-KLAIATARMKGE---------FPERLGQPECQYYLKTGTCKF 92
Query: 6 GA 1
GA
Sbjct: 93 GA 94
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,867,139,694
Number of Sequences: 462764
Number of Extensions: 32867139694
Number of Successful Extensions: 314845248
Number of sequences better than 0.0: 0
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