BLASTX 7.6.2
Query= RU36600 /QuerySize=169
(168 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5RJC5|ZFNL5_ARATH Zinc finger CCCH domain-containing protein... 83 3e-016
sp|Q9STM4|ZFNL6_ARATH Putative zinc finger CCCH domain-containin... 74 2e-013
sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZF... 55 1e-007
sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein... 53 4e-007
sp|Q8GXX7|ZFN1_ARATH Zinc finger CCCH domain-containing protein ... 53 5e-007
sp|Q8L7N8|ZFN3_ARATH Zinc finger type domain-containing protein ... 51 2e-006
sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein... 50 3e-006
>sp|Q5RJC5|ZFNL5_ARATH Zinc finger CCCH domain-containing protein ZFN-like 5
OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2
Length = 435
Score = 83 bits (204), Expect = 3e-016
Identities = 35/54 (64%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
CSFY++TG+CK+GS+CKFNHPVRRK Q+ +++V+E+DE E P L ECKYYFR
Sbjct: 107 CSFYMRTGSCKYGSSCKFNHPVRRK-LQIGRERVRERDEDVENPKLMECKYYFR 159
>sp|Q9STM4|ZFNL6_ARATH Putative zinc finger CCCH domain-containing protein
ZFN-like 6 OS=Arabidopsis thaliana GN=At3g48440 PE=3 SV=1
Length = 448
Score = 74 bits (181), Expect = 2e-013
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
CSFY++TG+CKFGS+CKFNHP+ RK +KV+EK++ K L +CKYYFR
Sbjct: 116 CSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFR 169
>sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum
sativum PE=2 SV=1
Length = 417
Score = 55 bits (130), Expect = 1e-007
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
CS+Y++TG C+FG+ C+FNHP RK + + K EF E+ EC+YY +
Sbjct: 36 CSYYIRTGLCRFGATCRFNHPPNRK---LAIATARMKGEFPERLGQPECQYYLK 86
>sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein 63 OS=Oryza
sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2
Length = 444
Score = 53 bits (126), Expect = 4e-007
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
CS+Y++TG C+FG CKFNHP RK + + K E+ ++ EC+YY +
Sbjct: 62 CSYYMRTGLCRFGMTCKFNHPADRK---MAVAAARMKGEYPQRIGQPECQYYLK 112
>sp|Q8GXX7|ZFN1_ARATH Zinc finger CCCH domain-containing protein ZFN1
OS=Arabidopsis thaliana GN=ZFN1 PE=2 SV=1
Length = 397
Score = 53 bits (125), Expect = 5e-007
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
CS+Y++TG C+FGS C+FNHP ++ ++ + + E+ E+ EC+YY +
Sbjct: 46 CSYYIRTGLCRFGSTCRFNHP---RDRELVIATARMRGEYPERIGQPECEYYLK 96
>sp|Q8L7N8|ZFN3_ARATH Zinc finger type domain-containing protein ZFN3
OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2
Length = 375
Score = 51 bits (120), Expect = 2e-006
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
C++Y++TG C+FGS C+FNHP RK + + K E+ E+ EC++Y +
Sbjct: 48 CAYYIRTGLCRFGSTCRFNHPHDRK---LVIATARIKGEYPERIGQPECEFYLK 98
>sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein 66 OS=Oryza
sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1
Length = 454
Score = 50 bits (118), Expect = 3e-006
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
CS+Y++TG C+FG CKFNHP RK + + E+ + EC+YY +
Sbjct: 72 CSYYMRTGLCRFGMTCKFNHPPNRK---LAVAAARMNGEYPYRVGQPECQYYLK 122
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,439,239,412
Number of Sequences: 462764
Number of Extensions: 35439239412
Number of Successful Extensions: 339312642
Number of sequences better than 0.0: 0
|