BLASTX 7.6.2
Query= RU37683 /QuerySize=226
(225 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6AUG0|U2AFB_ORYSJ Splicing factor U2af small subunit B OS=Or... 118 9e-027
sp|Q9ZQW8|U2AFA_ORYSJ Splicing factor U2af small subunit A OS=Or... 116 4e-026
sp|Q29350|U2AF1_PIG Splicing factor U2AF 35 kDa subunit (Fragmen... 100 2e-021
sp|Q3T127|U2AF4_BOVIN Splicing factor U2AF 26 kDa subunit OS=Bos... 100 2e-021
sp|Q8BGJ9|U2AF4_MOUSE Splicing factor U2AF 26 kDa subunit OS=Mus... 100 2e-021
sp|Q7TP17|U2AF4_RAT Splicing factor U2AF 26 kDa subunit OS=Rattu... 100 2e-021
sp|Q94535|U2AF1_DROME Splicing factor U2af 38 kDa subunit OS=Dro... 100 3e-021
sp|A1A4K8|U2AF1_BOVIN Splicing factor U2AF 35 kDa subunit OS=Bos... 99 5e-021
sp|Q01081|U2AF1_HUMAN Splicing factor U2AF 35 kDa subunit OS=Hom... 99 5e-021
sp|Q9D883|U2AF1_MOUSE Splicing factor U2AF 35 kDa subunit OS=Mus... 99 5e-021
sp|Q8WU68|U2AF4_HUMAN Splicing factor U2AF 26 kDa subunit OS=Hom... 99 7e-021
sp|Q09176|U2AF1_SCHPO Splicing factor U2AF 23 kDa subunit OS=Sch... 89 4e-018
sp|Q15695|U2AFL_HUMAN U2 small nuclear ribonucleoprotein auxilia... 70 3e-012
sp|Q15696|U2AFM_HUMAN U2 small nuclear ribonucleoprotein auxilia... 70 3e-012
sp|Q62377|U2AFM_MOUSE U2 small nuclear ribonucleoprotein auxilia... 70 4e-012
sp|Q64707|U2AFL_MOUSE U2 small nuclear ribonucleoprotein auxilia... 59 5e-009
sp|Q6YVX9|C3H16_ORYSJ Zinc finger CCCH domain-containing protein... 57 3e-008
>sp|Q6AUG0|U2AFB_ORYSJ Splicing factor U2af small subunit B OS=Oryza sativa
subsp. japonica GN=U2AF35B PE=2 SV=1
Length = 304
Score = 118 bits (295), Expect = 9e-027
Identities = 51/58 (87%), Positives = 57/58 (98%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPVLL 15
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT+SPT++L+NMYQRP ++
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMI 58
>sp|Q9ZQW8|U2AFA_ORYSJ Splicing factor U2af small subunit A OS=Oryza sativa
subsp. japonica GN=U2AF35A PE=2 SV=1
Length = 290
Score = 116 bits (289), Expect = 4e-026
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPVLL 15
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P++SPTLLLSNMY RP ++
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMI 58
>sp|Q29350|U2AF1_PIG Splicing factor U2AF 35 kDa subunit (Fragment) OS=Sus
scrofa GN=U2AF1 PE=3 SV=3
Length = 82
Score = 100 bits (248), Expect = 2e-021
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 24
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNP 55
>sp|Q3T127|U2AF4_BOVIN Splicing factor U2AF 26 kDa subunit OS=Bos taurus
GN=U2AF1L4 PE=2 SV=1
Length = 220
Score = 100 bits (248), Expect = 2e-021
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 24
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNP 55
>sp|Q8BGJ9|U2AF4_MOUSE Splicing factor U2AF 26 kDa subunit OS=Mus musculus
GN=U2af1l4 PE=1 SV=1
Length = 220
Score = 100 bits (248), Expect = 2e-021
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 24
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNP 55
>sp|Q7TP17|U2AF4_RAT Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus
GN=U2af1l4 PE=2 SV=1
Length = 220
Score = 100 bits (248), Expect = 2e-021
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 24
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNP 55
>sp|Q94535|U2AF1_DROME Splicing factor U2af 38 kDa subunit OS=Drosophila
melanogaster GN=U2af38 PE=1 SV=2
Length = 264
Score = 100 bits (247), Expect = 3e-021
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 24
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNP 55
>sp|A1A4K8|U2AF1_BOVIN Splicing factor U2AF 35 kDa subunit OS=Bos taurus
GN=U2AF1 PE=2 SV=1
Length = 237
Score = 99 bits (245), Expect = 5e-021
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 24
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNP 55
>sp|Q01081|U2AF1_HUMAN Splicing factor U2AF 35 kDa subunit OS=Homo sapiens
GN=U2AF1 PE=1 SV=3
Length = 240
Score = 99 bits (245), Expect = 5e-021
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 24
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNP 55
>sp|Q9D883|U2AF1_MOUSE Splicing factor U2AF 35 kDa subunit OS=Mus musculus
GN=U2af1 PE=2 SV=4
Length = 239
Score = 99 bits (245), Expect = 5e-021
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 24
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNP 55
>sp|Q8WU68|U2AF4_HUMAN Splicing factor U2AF 26 kDa subunit OS=Homo sapiens
GN=U2AF1L4 PE=1 SV=2
Length = 220
Score = 99 bits (244), Expect = 7e-021
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 24
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQTIVLLNLYRNP 55
>sp|Q09176|U2AF1_SCHPO Splicing factor U2AF 23 kDa subunit
OS=Schizosaccharomyces pombe GN=SPAP8A3.06 PE=1 SV=2
Length = 216
Score = 89 bits (220), Expect = 4e-018
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = -2
Query: 188 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPV 21
MA HLASI+GTE+D+VNC FY+KIGACRHG+RCSR H +P S T+L NMY+ P+
Sbjct: 1 MASHLASIYGTEQDKVNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPI 56
>sp|Q15695|U2AFL_HUMAN U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 OS=Homo sapiens GN=ZRSR1 PE=2 SV=2
Length = 479
Score = 70 bits (170), Expect = 3e-012
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = -2
Query: 155 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMY 33
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+
Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMF 211
>sp|Q15696|U2AFM_HUMAN U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 OS=Homo sapiens GN=ZRSR2 PE=1 SV=2
Length = 482
Score = 70 bits (170), Expect = 3e-012
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = -2
Query: 155 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMY 33
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMF 206
>sp|Q62377|U2AFM_MOUSE U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 OS=Mus musculus GN=Zrsr2 PE=2 SV=1
Length = 462
Score = 70 bits (169), Expect = 4e-012
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -2
Query: 155 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMY 33
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ M+
Sbjct: 170 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMF 210
>sp|Q64707|U2AFL_MOUSE U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 OS=Mus musculus GN=Zrsr1 PE=2 SV=1
Length = 428
Score = 59 bits (142), Expect = 5e-009
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -2
Query: 155 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMY 33
EK R +CPFY K GACR G+RCSR H+ PT SPTLL+ +M+
Sbjct: 157 EKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMF 197
>sp|Q6YVX9|C3H16_ORYSJ Zinc finger CCCH domain-containing protein 16 OS=Oryza
sativa subsp. japonica GN=Os02g0557500 PE=2 SV=2
Length = 678
Score = 57 bits (135), Expect = 3e-008
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = -2
Query: 155 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPVL 18
++D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P L
Sbjct: 163 QQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGL 208
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,439,239,412
Number of Sequences: 462764
Number of Extensions: 35439239412
Number of Successful Extensions: 339312642
Number of sequences better than 0.0: 0
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