BLASTX 7.6.2
Query= RU40159 /QuerySize=228
(227 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q54SP4|DHKD_DICDI Hybrid signal transduction histidine kinase... 60 3e-009
sp|A7N6S2|CQSS_VIBHB CAI-1 autoinducer sensor kinase/phosphatase... 58 1e-008
sp|A3Q5L9|MPRA_MYCSJ Response regulator mprA OS=Mycobacterium sp... 53 3e-007
sp|A1UL70|MPRA_MYCSK Response regulator mprA OS=Mycobacterium sp... 53 3e-007
sp|Q1B3X8|MPRA_MYCSS Response regulator mprA OS=Mycobacterium sp... 53 3e-007
sp|Q8D0P1|CHEY_YERPE Chemotaxis protein cheY OS=Yersinia pestis ... 53 4e-007
sp|A0R3I8|MPRA_MYCS2 Response regulator mprA OS=Mycobacterium sm... 53 4e-007
sp|P0A2D6|CHEY_SALTI Chemotaxis protein cheY OS=Salmonella typhi... 52 1e-006
sp|P0A2D5|CHEY_SALTY Chemotaxis protein cheY OS=Salmonella typhi... 52 1e-006
sp|P0AE68|CHEY_ECO57 Chemotaxis protein cheY OS=Escherichia coli... 51 1e-006
sp|P0AE67|CHEY_ECOLI Chemotaxis protein cheY OS=Escherichia coli... 51 1e-006
sp|Q9FAD7|CHEY_ENTCL Chemotaxis protein cheY OS=Enterobacter clo... 51 1e-006
sp|P0AE69|CHEY_SHIFL Chemotaxis protein cheY OS=Shigella flexner... 51 1e-006
sp|Q93P00|CHEY_YEREN Chemotaxis protein cheY OS=Yersinia enteroc... 51 1e-006
sp|Q8FGP6|CHEY_ECOL6 Chemotaxis protein cheY OS=Escherichia coli... 51 2e-006
sp|A0QBQ9|MPRA_MYCA1 Response regulator mprA OS=Mycobacterium av... 50 2e-006
sp|Q7U0X4|MPRA_MYCBO Response regulator mprA OS=Mycobacterium bo... 50 2e-006
sp|A1KHB7|MPRA_MYCBP Response regulator mprA OS=Mycobacterium bo... 50 2e-006
sp|Q742C1|MPRA_MYCPA Response regulator mprA OS=Mycobacterium pa... 50 2e-006
sp|A5U123|MPRA_MYCTA Response regulator mprA OS=Mycobacterium tu... 50 2e-006
sp|O53894|MPRA_MYCTU Response regulator mprA OS=Mycobacterium tu... 50 2e-006
sp|P52940|SP0A_CLOPA Stage 0 sporulation protein A homolog OS=Cl... 50 3e-006
sp|A0PWB4|MPRA_MYCUA Response regulator mprA OS=Mycobacterium ul... 49 6e-006
sp|A1TEL7|MPRA_MYCVP Response regulator mprA OS=Mycobacterium va... 49 6e-006
>sp|Q54SP4|DHKD_DICDI Hybrid signal transduction histidine kinase D
OS=Dictyostelium discoideum GN=dhkD PE=2 SV=1
Length = 1546
Score = 60 bits (144), Expect = 3e-009
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = -3
Query: 207 IKHKPTMLIVDDNEEMLNFLSSSLADKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRM 28
I +KP +L+V+DN EM F++ L+ Y ++TA DG+E + K + LIV+D MMPRM
Sbjct: 566 IHNKPIVLVVEDNPEMNRFIAELLSKYYFVVTAFDGVEGIEKTRAITPDLIVTDCMMPRM 625
Query: 27 DGVEFCKAI 1
G E + +
Sbjct: 626 SGDEMVEQL 634
>sp|A7N6S2|CQSS_VIBHB CAI-1 autoinducer sensor kinase/phosphatase cqsS OS=Vibrio
harveyi (strain ATCC BAA-1116 / BB120) GN=cqsS PE=1 SV=1
Length = 681
Score = 58 bits (139), Expect = 1e-008
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = -3
Query: 201 HKPTMLIVDDNEEMLNFLSSSLADK-YSILTAEDGIEALNKLKENEVTLIVSDWMMPRMD 25
+K T+++VDDNE + F + L + + ++ EDG++A+N L EN V LI+ D MP MD
Sbjct: 561 NKRTIMVVDDNESLRKFTAMLLEKQGFEVIQTEDGLQAINALNENNVDLILMDIEMPVMD 620
Query: 24 GVEFCKAI 1
GVE + I
Sbjct: 621 GVEASRQI 628
>sp|A3Q5L9|MPRA_MYCSJ Response regulator mprA OS=Mycobacterium sp. (strain JLS)
GN=mprA PE=3 SV=1
Length = 230
Score = 53 bits (126), Expect = 3e-007
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + YS+ A+DG+EAL+ + N +V D MMPR+DG+E
Sbjct: 5 ILVVDDDRAVRESLRRSLSFNGYSVELAQDGVEALDLIANNRPDAVVLDVMMPRLDGLEV 64
Query: 12 CKAI 1
C+ +
Sbjct: 65 CRQL 68
>sp|A1UL70|MPRA_MYCSK Response regulator mprA OS=Mycobacterium sp. (strain KMS)
GN=mprA PE=3 SV=1
Length = 230
Score = 53 bits (126), Expect = 3e-007
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + YS+ A+DG+EAL+ + N +V D MMPR+DG+E
Sbjct: 5 ILVVDDDRAVRESLRRSLSFNGYSVELAQDGVEALDLIANNRPDAVVLDVMMPRLDGLEV 64
Query: 12 CKAI 1
C+ +
Sbjct: 65 CRQL 68
>sp|Q1B3X8|MPRA_MYCSS Response regulator mprA OS=Mycobacterium sp. (strain MCS)
GN=mprA PE=3 SV=1
Length = 230
Score = 53 bits (126), Expect = 3e-007
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + YS+ A+DG+EAL+ + N +V D MMPR+DG+E
Sbjct: 5 ILVVDDDRAVRESLRRSLSFNGYSVELAQDGVEALDLIANNRPDAVVLDVMMPRLDGLEV 64
Query: 12 CKAI 1
C+ +
Sbjct: 65 CRQL 68
>sp|Q8D0P1|CHEY_YERPE Chemotaxis protein cheY OS=Yersinia pestis GN=cheY PE=3
SV=3
Length = 129
Score = 53 bits (125), Expect = 4e-007
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = -3
Query: 186 LIVDDNEEMLNFLSSSLADK--YSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
L+VDD M + + L + +++ AEDG++ALNKL+ +VSDW MP MDG++
Sbjct: 9 LVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLRAGGFDFVVSDWNMPNMDGLDL 68
Query: 12 CKAI 1
K I
Sbjct: 69 LKTI 72
>sp|A0R3I8|MPRA_MYCS2 Response regulator mprA OS=Mycobacterium smegmatis GN=mprA
PE=3 SV=1
Length = 230
Score = 53 bits (125), Expect = 4e-007
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + YS+ A+DG+EAL+ + N ++ D MMPR+DG+E
Sbjct: 5 ILVVDDDRAVRESLRRSLSFNGYSVELAQDGVEALDAITNNRPDALILDVMMPRLDGLEV 64
Query: 12 CKAI 1
C+ +
Sbjct: 65 CRQL 68
>sp|P0A2D6|CHEY_SALTI Chemotaxis protein cheY OS=Salmonella typhi GN=cheY PE=3
SV=2
Length = 129
Score = 52 bits (122), Expect = 1e-006
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -3
Query: 186 LIVDDNEEMLNFLSSSLADK--YSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
L+VDD M + + L + ++ AEDG++ALNKL+ I+SDW MP MDG+E
Sbjct: 9 LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFIISDWNMPNMDGLEL 68
Query: 12 CKAI 1
K I
Sbjct: 69 LKTI 72
>sp|P0A2D5|CHEY_SALTY Chemotaxis protein cheY OS=Salmonella typhimurium GN=cheY
PE=1 SV=2
Length = 129
Score = 52 bits (122), Expect = 1e-006
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -3
Query: 186 LIVDDNEEMLNFLSSSLADK--YSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
L+VDD M + + L + ++ AEDG++ALNKL+ I+SDW MP MDG+E
Sbjct: 9 LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFIISDWNMPNMDGLEL 68
Query: 12 CKAI 1
K I
Sbjct: 69 LKTI 72
>sp|P0AE68|CHEY_ECO57 Chemotaxis protein cheY OS=Escherichia coli O157:H7
GN=cheY PE=3 SV=2
Length = 129
Score = 51 bits (121), Expect = 1e-006
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -3
Query: 186 LIVDDNEEMLNFLSSSLADK--YSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
L+VDD M + + L + ++ AEDG++ALNKL+ ++SDW MP MDG+E
Sbjct: 9 LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLEL 68
Query: 12 CKAI 1
K I
Sbjct: 69 LKTI 72
>sp|P0AE67|CHEY_ECOLI Chemotaxis protein cheY OS=Escherichia coli (strain K12)
GN=cheY PE=1 SV=2
Length = 129
Score = 51 bits (121), Expect = 1e-006
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -3
Query: 186 LIVDDNEEMLNFLSSSLADK--YSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
L+VDD M + + L + ++ AEDG++ALNKL+ ++SDW MP MDG+E
Sbjct: 9 LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLEL 68
Query: 12 CKAI 1
K I
Sbjct: 69 LKTI 72
>sp|Q9FAD7|CHEY_ENTCL Chemotaxis protein cheY OS=Enterobacter cloacae GN=cheY
PE=3 SV=3
Length = 129
Score = 51 bits (121), Expect = 1e-006
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -3
Query: 186 LIVDDNEEMLNFLSSSLADK--YSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
L+VDD M + + L + ++ AEDG++ALNKL+ ++SDW MP MDG+E
Sbjct: 9 LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFVISDWNMPNMDGLEL 68
Query: 12 CKAI 1
K I
Sbjct: 69 LKTI 72
>sp|P0AE69|CHEY_SHIFL Chemotaxis protein cheY OS=Shigella flexneri GN=cheY PE=3
SV=2
Length = 129
Score = 51 bits (121), Expect = 1e-006
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -3
Query: 186 LIVDDNEEMLNFLSSSLADK--YSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
L+VDD M + + L + ++ AEDG++ALNKL+ ++SDW MP MDG+E
Sbjct: 9 LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLEL 68
Query: 12 CKAI 1
K I
Sbjct: 69 LKTI 72
>sp|Q93P00|CHEY_YEREN Chemotaxis protein cheY OS=Yersinia enterocolitica GN=cheY
PE=3 SV=3
Length = 129
Score = 51 bits (121), Expect = 1e-006
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -3
Query: 186 LIVDDNEEMLNFLSSSLADK--YSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
L+VDD M + + L + ++ AEDG++ALNKL+ +VSDW MP MDG++
Sbjct: 9 LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLRTGGFDFVVSDWNMPNMDGLDL 68
Query: 12 CKAI 1
K I
Sbjct: 69 LKTI 72
>sp|Q8FGP6|CHEY_ECOL6 Chemotaxis protein cheY OS=Escherichia coli O6 GN=cheY
PE=3 SV=3
Length = 129
Score = 51 bits (120), Expect = 2e-006
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -3
Query: 186 LIVDDNEEMLNFLSSSLADK--YSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
L+VDD M + + L + ++ AEDG++ALNKL+ ++SDW MP MDG+E
Sbjct: 9 LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGLDALNKLQAGGYGFVISDWNMPNMDGLEL 68
Query: 12 CKAI 1
K I
Sbjct: 69 LKTI 72
>sp|A0QBQ9|MPRA_MYCA1 Response regulator mprA OS=Mycobacterium avium (strain
104) GN=mprA PE=3 SV=1
Length = 228
Score = 50 bits (119), Expect = 2e-006
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + YS+ A DG+EAL+ + + +V D MMPR+DG+E
Sbjct: 3 ILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGLEV 62
Query: 12 CKAI 1
C+ +
Sbjct: 63 CRQL 66
>sp|Q7U0X4|MPRA_MYCBO Response regulator mprA OS=Mycobacterium bovis GN=mprA
PE=1 SV=1
Length = 230
Score = 50 bits (119), Expect = 2e-006
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + YS+ A DG+EAL+ + + +V D MMPR+DG+E
Sbjct: 5 ILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGLEV 64
Query: 12 CKAI 1
C+ +
Sbjct: 65 CRQL 68
>sp|A1KHB7|MPRA_MYCBP Response regulator mprA OS=Mycobacterium bovis (strain BCG
/ Pasteur 1173P2) GN=mprA PE=3 SV=1
Length = 230
Score = 50 bits (119), Expect = 2e-006
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + YS+ A DG+EAL+ + + +V D MMPR+DG+E
Sbjct: 5 ILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGLEV 64
Query: 12 CKAI 1
C+ +
Sbjct: 65 CRQL 68
>sp|Q742C1|MPRA_MYCPA Response regulator mprA OS=Mycobacterium paratuberculosis
GN=mprA PE=3 SV=1
Length = 228
Score = 50 bits (119), Expect = 2e-006
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + YS+ A DG+EAL+ + + +V D MMPR+DG+E
Sbjct: 3 ILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGLEV 62
Query: 12 CKAI 1
C+ +
Sbjct: 63 CRQL 66
>sp|A5U123|MPRA_MYCTA Response regulator mprA OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=mprA PE=3 SV=1
Length = 230
Score = 50 bits (119), Expect = 2e-006
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + YS+ A DG+EAL+ + + +V D MMPR+DG+E
Sbjct: 5 ILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGLEV 64
Query: 12 CKAI 1
C+ +
Sbjct: 65 CRQL 68
>sp|O53894|MPRA_MYCTU Response regulator mprA OS=Mycobacterium tuberculosis
GN=mprA PE=1 SV=1
Length = 230
Score = 50 bits (119), Expect = 2e-006
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + YS+ A DG+EAL+ + + +V D MMPR+DG+E
Sbjct: 5 ILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGLEV 64
Query: 12 CKAI 1
C+ +
Sbjct: 65 CRQL 68
>sp|P52940|SP0A_CLOPA Stage 0 sporulation protein A homolog OS=Clostridium
pasteurianum GN=spo0A PE=3 SV=1
Length = 273
Score = 50 bits (118), Expect = 3e-006
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Frame = -3
Query: 198 KPTMLIVDDNEEMLNFLSSSLADKYSILT---AEDGIEALNKLKENEVTLIVSDWMMPRM 28
K ++LI DDN+E N L+ L ++ I+ A+DGIEAL ++E + L++ D +MP M
Sbjct: 5 KISVLIADDNKEFCNILNDYLLNQSDIVVVGIAKDGIEALKLIEEKKPDLVILDIIMPNM 64
Query: 27 DGV 19
DG+
Sbjct: 65 DGL 67
>sp|A0PWB4|MPRA_MYCUA Response regulator mprA OS=Mycobacterium ulcerans (strain
Agy99) GN=mprA PE=3 SV=1
Length = 232
Score = 49 bits (115), Expect = 6e-006
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + Y++ A DG+EAL + + +V D MMPR+DG+E
Sbjct: 5 ILVVDDDRAVRESLRRSLSFNGYTVELAHDGVEALEMIASDRPDALVLDVMMPRLDGLEV 64
Query: 12 CKAI 1
C+ +
Sbjct: 65 CRQL 68
>sp|A1TEL7|MPRA_MYCVP Response regulator mprA OS=Mycobacterium vanbaalenii
(strain DSM 7251 / PYR-1) GN=mprA PE=3 SV=1
Length = 231
Score = 49 bits (115), Expect = 6e-006
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -3
Query: 189 MLIVDDNEEMLNFLSSSLA-DKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMDGVEF 13
+L+VDD+ + L SL+ + YS+ A+DG EAL+ + + +V D MMPR+DG+E
Sbjct: 5 ILVVDDDRAVRESLRRSLSFNGYSVELAQDGREALDLIASDRPDAVVLDVMMPRLDGLEV 64
Query: 12 CKAI 1
C+ +
Sbjct: 65 CRQL 68
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,778,694,167
Number of Sequences: 462764
Number of Extensions: 35778694167
Number of Successful Extensions: 346783611
Number of sequences better than 0.0: 0
|