BLASTX 7.6.2
Query= RU44334 /QuerySize=845
(844 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P26861|RM06_MARPO 60S ribosomal protein L6, mitochondrial OS=... 140 1e-032
sp|Q8EUC8|RL6_MYCPE 50S ribosomal protein L6 OS=Mycoplasma penet... 87 2e-016
sp|Q2JQN4|RL6_SYNJA 50S ribosomal protein L6 OS=Synechococcus sp... 86 3e-016
sp|B2IK77|RL6_BEII9 50S ribosomal protein L6 OS=Beijerinckia ind... 86 3e-016
sp|Q5FM76|RL6_LACAC 50S ribosomal protein L6 OS=Lactobacillus ac... 84 1e-015
sp|Q034Z8|RL6_LACC3 50S ribosomal protein L6 OS=Lactobacillus ca... 84 1e-015
sp|B3WAK3|RL6_LACCB 50S ribosomal protein L6 OS=Lactobacillus ca... 84 1e-015
sp|A8YXM0|RL6_LACH4 50S ribosomal protein L6 OS=Lactobacillus he... 84 1e-015
sp|Q3J8S9|RL6_NITOC 50S ribosomal protein L6 OS=Nitrosococcus oc... 83 2e-015
sp|A7HM37|RL6_FERNB 50S ribosomal protein L6 OS=Fervidobacterium... 83 2e-015
sp|B7IHW1|RL6_THEAB 50S ribosomal protein L6 OS=Thermosipho afri... 83 2e-015
sp|Q3SSV1|RL6_NITWN 50S ribosomal protein L6 OS=Nitrobacter wino... 82 4e-015
sp|Q2JIL3|RL6_SYNJB 50S ribosomal protein L6 OS=Synechococcus sp... 82 4e-015
sp|O21255|RM06_RECAM 60S ribosomal protein L6, mitochondrial OS=... 82 4e-015
sp|Q6F1X9|RL6_MESFL 50S ribosomal protein L6 OS=Mesoplasma floru... 82 5e-015
sp|Q3A9T1|RL6_CARHZ 50S ribosomal protein L6 OS=Carboxydothermus... 81 6e-015
sp|Q38US6|RL6_LACSS 50S ribosomal protein L6 OS=Lactobacillus sa... 81 6e-015
sp|Q89J99|RL6_BRAJA 50S ribosomal protein L6 OS=Bradyrhizobium j... 80 1e-014
sp|A6LLM8|RL6_THEM4 50S ribosomal protein L6 OS=Thermosipho mela... 80 1e-014
sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic OS=A... 80 1e-014
sp|A9NEE8|RL6_ACHLI 50S ribosomal protein L6 OS=Acholeplasma lai... 80 1e-014
sp|Q47J88|RL6_DECAR 50S ribosomal protein L6 OS=Dechloromonas ar... 80 1e-014
sp|Q2N9C6|RL6_ERYLH 50S ribosomal protein L6 OS=Erythrobacter li... 80 1e-014
sp|Q1QN15|RL6_NITHX 50S ribosomal protein L6 OS=Nitrobacter hamb... 80 1e-014
sp|Q6ME49|RL6_PARUW 50S ribosomal protein L6 OS=Protochlamydia a... 80 1e-014
sp|Q9ZAE4|RL6_THEMA 50S ribosomal protein L6 OS=Thermotoga marit... 80 1e-014
sp|Q4G353|RK6_EMIHU 50S ribosomal protein L6, chloroplastic OS=E... 80 2e-014
sp|B7K234|RL6_CYAP8 50S ribosomal protein L6 OS=Cyanothece sp. (... 80 2e-014
sp|A9ADK8|RL6_BURM1 50S ribosomal protein L6 OS=Burkholderia mul... 79 3e-014
sp|A3MRW9|RL6_BURM7 50S ribosomal protein L6 OS=Burkholderia mal... 79 4e-014
>sp|P26861|RM06_MARPO 60S ribosomal protein L6, mitochondrial OS=Marchantia
polymorpha GN=RPL6 PE=3 SV=2
Length = 101
Score = 140 bits (352), Expect = 1e-032
Identities = 63/93 (67%), Positives = 77/93 (82%)
Frame = +1
Query: 199 MEAQFFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGI 378
MEA+FF FL+I+GVGYKA AQG +LYLKLG+SHE+ L V P+VRVFC K N++CCTG+
Sbjct: 1 MEAKFFCFLEIIGVGYKASTNAQGSILYLKLGFSHEIRLQVTPSVRVFCLKPNLICCTGM 60
Query: 379 DKNRVHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
D +V QFAA V+SCKPPEVYKGKGI Y +E+I
Sbjct: 61 DHQKVTQFAAIVKSCKPPEVYKGKGIQYRNEII 93
>sp|Q8EUC8|RL6_MYCPE 50S ribosomal protein L6 OS=Mycoplasma penetrans GN=rplF
PE=3 SV=1
Length = 183
Score = 87 bits (213), Expect = 2e-016
Identities = 45/85 (52%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Frame = +1
Query: 223 LKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNRVHQF 402
LKIVGVGYK A G + L LGYSH ++L +P + V C ++ V TG DK V QF
Sbjct: 88 LKIVGVGYK--AAVNGNKINLNLGYSHPIDLEIPAGLNVTCPQATEVVITGADKAVVGQF 145
Query: 403 AAAVRSCKPPEVYKGKGIMYIDEVI 477
AA +RS +PPE YKGKG+ Y +EVI
Sbjct: 146 AAVIRSKRPPEPYKGKGVAYSNEVI 170
>sp|Q2JQN4|RL6_SYNJA 50S ribosomal protein L6 OS=Synechococcus sp. (strain
JA-3-3Ab) GN=rplF PE=3 SV=1
Length = 181
Score = 86 bits (211), Expect = 3e-016
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F R L++VGVGY RA QG L L +GYSH VE+ PP +++ +NV+ +GIDK
Sbjct: 83 FERRLELVGVGY--RASTQGNKLILNVGYSHPVEIPFPPGIQIAVEGNNVIVVSGIDKEL 140
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V AA +R+ +PPE YKGKGI Y+ E +
Sbjct: 141 VGNTAARIRAVRPPEPYKGKGIRYVGEQV 169
>sp|B2IK77|RL6_BEII9 50S ribosomal protein L6 OS=Beijerinckia indica subsp.
indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplF PE=3 SV=1
Length = 177
Score = 86 bits (210), Expect = 3e-016
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F R L+I GVGYK A QG+ L L LGYSH++ +P + + K V TGIDK R
Sbjct: 83 FERKLEITGVGYK--AAVQGKNLQLSLGYSHDISFPIPDGIAIAAPKPTEVSITGIDKQR 140
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA +R+ +PPE YKGKG+ Y E I
Sbjct: 141 VGQIAAEIRALRPPEPYKGKGVKYAGEFI 169
>sp|Q5FM76|RL6_LACAC 50S ribosomal protein L6 OS=Lactobacillus acidophilus
GN=rplF PE=3 SV=1
Length = 176
Score = 84 bits (206), Expect = 1e-015
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +1
Query: 223 LKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNRVHQF 402
LK++GVGY RA+AQG + L +GYSH V LT P V V + V G+ K V QF
Sbjct: 85 LKLIGVGY--RAQAQGNKITLNVGYSHPVVLTAPEGVSVKATSATDVEVEGVSKQDVGQF 142
Query: 403 AAAVRSCKPPEVYKGKGIMYIDEVI 477
AA +R+ +PPE YKGKGI Y+DE +
Sbjct: 143 AAEIRAVRPPEPYKGKGIRYVDEYV 167
>sp|Q034Z8|RL6_LACC3 50S ribosomal protein L6 OS=Lactobacillus casei (strain
ATCC 334) GN=rplF PE=3 SV=1
Length = 176
Score = 84 bits (205), Expect = 1e-015
Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Frame = +1
Query: 223 LKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNRVHQF 402
+K+VGVGY RA+ QG L L +GYSH VE+T P V V + + +GI K V QF
Sbjct: 85 MKLVGVGY--RAQKQGEKLVLNVGYSHPVEMTAPKGVTVEVPSTTQIIISGISKQVVGQF 142
Query: 403 AAAVRSCKPPEVYKGKGIMYIDE 471
AA VRS + PE YKGKGI Y+DE
Sbjct: 143 AAVVRSVRAPEPYKGKGIRYVDE 165
>sp|B3WAK3|RL6_LACCB 50S ribosomal protein L6 OS=Lactobacillus casei (strain
BL23) GN=rplF PE=3 SV=1
Length = 176
Score = 84 bits (205), Expect = 1e-015
Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Frame = +1
Query: 223 LKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNRVHQF 402
+K+VGVGY RA+ QG L L +GYSH VE+T P V V + + +GI K V QF
Sbjct: 85 MKLVGVGY--RAQKQGEKLVLNVGYSHPVEMTAPKGVTVEVPSTTQIIISGISKQVVGQF 142
Query: 403 AAAVRSCKPPEVYKGKGIMYIDE 471
AA VRS + PE YKGKGI Y+DE
Sbjct: 143 AAVVRSVRAPEPYKGKGIRYVDE 165
>sp|A8YXM0|RL6_LACH4 50S ribosomal protein L6 OS=Lactobacillus helveticus
(strain DPC 4571) GN=rplF PE=3 SV=1
Length = 176
Score = 84 bits (205), Expect = 1e-015
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +1
Query: 223 LKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNRVHQF 402
LK++GVGY RA+AQG + L +GYSH V LT P V V + V G+ K V QF
Sbjct: 85 LKLIGVGY--RAQAQGNKVTLNVGYSHPVVLTAPEGVTVKATSATDVEVEGVSKQDVGQF 142
Query: 403 AAAVRSCKPPEVYKGKGIMYIDEVI 477
AA +R+ +PPE YKGKGI Y+DE +
Sbjct: 143 AAEIRAVRPPEPYKGKGIRYVDEYV 167
>sp|Q3J8S9|RL6_NITOC 50S ribosomal protein L6 OS=Nitrosococcus oceani (strain
ATCC 19707 / NCIMB 11848) GN=rplF PE=3 SV=1
Length = 178
Score = 83 bits (204), Expect = 2e-015
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F R L++VGVGY RA+ QGR L L LGYSH VE T P + + + G DK +
Sbjct: 84 FERRLQLVGVGY--RAQLQGRKLVLSLGYSHPVEFTAPEGLTIEVPSPTEIIVKGYDKQQ 141
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA +R +PPE YKGKG+ Y DEV+
Sbjct: 142 VGQAAANIRRFRPPEPYKGKGVRYADEVV 170
>sp|A7HM37|RL6_FERNB 50S ribosomal protein L6 OS=Fervidobacterium nodosum
(strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=rplF PE=3 SV=1
Length = 184
Score = 83 bits (203), Expect = 2e-015
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L+IVGVGY RA+ QG L + LGY+H+VE VP V+V N + +GIDK R
Sbjct: 90 FKKELEIVGVGY--RAQLQGNKLIMNLGYAHQVEFDVPADVKVEVPAPNKIIVSGIDKQR 147
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA +R + P Y GKGI Y+DEV+
Sbjct: 148 VGQVAADIRKWREPNPYSGKGIKYVDEVL 176
>sp|B7IHW1|RL6_THEAB 50S ribosomal protein L6 OS=Thermosipho africanus (strain
TCF52B) GN=rplF PE=3 SV=1
Length = 184
Score = 83 bits (203), Expect = 2e-015
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L+IVG+GY RA+ QG+ L + LGY+H VE+ +P V+V N + +GIDK R
Sbjct: 90 FKKELEIVGIGY--RAQLQGKKLVMNLGYAHPVEMEIPSDVKVEVPSPNKIIVSGIDKQR 147
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA +R + P VY GKGI Y+ EV+
Sbjct: 148 VGQVAADIRKWREPNVYSGKGIRYVGEVV 176
>sp|Q3SSV1|RL6_NITWN 50S ribosomal protein L6 OS=Nitrobacter winogradskyi
(strain Nb-255 / ATCC 25391) GN=rplF PE=3 SV=1
Length = 177
Score = 82 bits (201), Expect = 4e-015
Identities = 43/89 (48%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L+I+GVGY RA QG+ L L LGYSH+V VP + + K + TG D R
Sbjct: 83 FEKKLEIIGVGY--RAALQGKSLQLALGYSHDVNYAVPEGITIAVPKPTEITITGNDAQR 140
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA +R +PPE YKGKG+ Y DE I
Sbjct: 141 VGQVAAEIRGYRPPEPYKGKGVKYADETI 169
>sp|Q2JIL3|RL6_SYNJB 50S ribosomal protein L6 OS=Synechococcus sp. GN=rplF PE=3
SV=1
Length = 181
Score = 82 bits (201), Expect = 4e-015
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F R L++VGVGY RA QG L L +GYSH VE+ PP +++ +N++ +G DK
Sbjct: 83 FERRLELVGVGY--RAAIQGSKLVLNVGYSHPVEIPFPPGIQIAVEGNNIIVVSGTDKEL 140
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V AA +R+ +PPE YKGKGI Y+ E +
Sbjct: 141 VGNTAARIRAVRPPEPYKGKGIRYLGEQV 169
>sp|O21255|RM06_RECAM 60S ribosomal protein L6, mitochondrial OS=Reclinomonas
americana GN=RPL6 PE=3 SV=1
Length = 185
Score = 82 bits (201), Expect = 4e-015
Identities = 39/89 (43%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
+ + +++VGVGYK A+ + L LK+G+S E+ +P ++V C +SN++ +GIDK +
Sbjct: 91 YSKTIELVGVGYK--AQLIDKKLVLKIGFSIEINYEIPSDIKVDCSRSNIIVISGIDKQK 148
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V+Q AA +R + PE YKGKGI Y+ EVI
Sbjct: 149 VNQVAAEIRLLRKPEPYKGKGIRYLGEVI 177
>sp|Q6F1X9|RL6_MESFL 50S ribosomal protein L6 OS=Mesoplasma florum GN=rplF PE=3
SV=1
Length = 180
Score = 82 bits (200), Expect = 5e-015
Identities = 46/89 (51%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L I GVGY RA G L L LGYSH VE T+P + V C K + +GIDK
Sbjct: 84 FKKTLDINGVGY--RAALAGSKLNLSLGYSHPVEYTIPQGITVECPKPTQIIISGIDKQV 141
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA +RS + PE YKGKGI Y DE+I
Sbjct: 142 VGQVAAEIRSYRRPEPYKGKGIKYSDEII 170
>sp|Q3A9T1|RL6_CARHZ 50S ribosomal protein L6 OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplF PE=3 SV=1
Length = 182
Score = 81 bits (199), Expect = 6e-015
Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +1
Query: 223 LKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNRVHQF 402
L++VGVGY RA QGR L L +GYSH VE+ P + + N + GIDK V F
Sbjct: 87 LELVGVGY--RAAKQGRKLVLTVGYSHPVEMDPPEGIEIEVPAQNQIIVKGIDKELVGNF 144
Query: 403 AAAVRSCKPPEVYKGKGIMYIDEVI 477
AA +R+ + PE YKGKGI Y DEVI
Sbjct: 145 AATIRAVREPEPYKGKGIKYTDEVI 169
>sp|Q38US6|RL6_LACSS 50S ribosomal protein L6 OS=Lactobacillus sakei subsp.
sakei (strain 23K) GN=rplF PE=3 SV=1
Length = 177
Score = 81 bits (199), Expect = 6e-015
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L ++GVGY RA+ +G+ L L +GYSH VE+ P V V + + +GI K +
Sbjct: 82 FKKTLDLIGVGY--RAQLKGKTLVLNVGYSHPVEMEAPEGVNVEVPSNTNIIISGISKQK 139
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDE 471
V QFAA +R +PPE YKGKGI Y DE
Sbjct: 140 VGQFAAEIRDVRPPEPYKGKGIRYTDE 166
>sp|Q89J99|RL6_BRAJA 50S ribosomal protein L6 OS=Bradyrhizobium japonicum
GN=rplF PE=3 SV=1
Length = 177
Score = 80 bits (197), Expect = 1e-014
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L+I GVGY RA QG+ L L LGYSH+V T+P + + K + TG D R
Sbjct: 83 FEKKLEITGVGY--RAAMQGKNLQLALGYSHDVIYTIPEGITITVPKPTEITVTGSDIQR 140
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA +RS +PPE YKGKG+ Y+ E I
Sbjct: 141 VGQVAAEIRSYRPPEPYKGKGVKYVGEFI 169
>sp|A6LLM8|RL6_THEM4 50S ribosomal protein L6 OS=Thermosipho melanesiensis
(strain BI429 / DSM 12029) GN=rplF PE=3 SV=1
Length = 184
Score = 80 bits (197), Expect = 1e-014
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L+I+G+GY RA+ QG+ L + LGY+H VE+ +P V V N + +GIDK R
Sbjct: 90 FRKELEIIGIGY--RAQLQGKKLVMNLGYAHPVEMEIPSDVAVEVPSPNRIVVSGIDKQR 147
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA +R + P VY GKGI Y+ EV+
Sbjct: 148 VGQVAADIRRWREPNVYSGKGIRYVGEVV 176
>sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic OS=Arabidopsis
thaliana GN=RPL6 PE=1 SV=1
Length = 223
Score = 80 bits (196), Expect = 1e-014
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L +VGVGY RA G+ L L LG+SH V++ +P +++V ++ + +G DK+
Sbjct: 126 FEKKLILVGVGY--RATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVSGYDKSE 183
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
+ QFAA VR +PPE YKGKG+ Y DE++
Sbjct: 184 IGQFAATVRKWRPPEPYKGKGVKYSDEIV 212
>sp|A9NEE8|RL6_ACHLI 50S ribosomal protein L6 OS=Acholeplasma laidlawii (strain
PG-8A) GN=rplF PE=3 SV=1
Length = 179
Score = 80 bits (196), Expect = 1e-014
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L+I GVGY RA+ QG L L+LG+SH +E+ +P + + K+ + GIDK
Sbjct: 84 FSKKLEIKGVGY--RAQLQGNTLVLQLGFSHNIEMPLPEGISLDVPKNTEITVNGIDKAV 141
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V QFAA +R + PE YKGKGI Y+DE +
Sbjct: 142 VGQFAAEIRKHRKPEPYKGKGIRYVDEYV 170
>sp|Q47J88|RL6_DECAR 50S ribosomal protein L6 OS=Dechloromonas aromatica (strain
RCB) GN=rplF PE=3 SV=1
Length = 176
Score = 80 bits (196), Expect = 1e-014
Identities = 43/89 (48%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F R L++VGVGY RA+AQG L L LG+SH V +P V+V C + G DK +
Sbjct: 82 FERKLQLVGVGY--RAQAQGDTLNLSLGFSHPVAHKMPAGVKVECPTQTEILIKGSDKQQ 139
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA +R+ + PE YKGKG+ Y DEV+
Sbjct: 140 VGQVAAEIRAYRKPEPYKGKGVRYADEVV 168
>sp|Q2N9C6|RL6_ERYLH 50S ribosomal protein L6 OS=Erythrobacter litoralis (strain
HTCC2594) GN=rplF PE=3 SV=1
Length = 177
Score = 80 bits (196), Expect = 1e-014
Identities = 43/89 (48%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L+I GVGY RA+AQG+ L L+LGYSH+V++ VP + V V +GIDK
Sbjct: 83 FSKTLEISGVGY--RAQAQGKTLKLQLGYSHDVDIAVPEGLEVKTPDQTTVIISGIDKQA 140
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA +R + PE YKGKGI Y E +
Sbjct: 141 VGQLAAEIRQWRKPEPYKGKGIKYQGEYV 169
>sp|Q1QN15|RL6_NITHX 50S ribosomal protein L6 OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=rplF PE=3 SV=1
Length = 177
Score = 80 bits (196), Expect = 1e-014
Identities = 42/89 (47%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L+IVGVGY RA QG+ L L LGYSH+V +P + + K + G D R
Sbjct: 83 FEKKLEIVGVGY--RAALQGKTLQLALGYSHDVSYAIPEGITIAVPKPTEITIAGNDAQR 140
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA +R +PPE YKGKG+ Y DE I
Sbjct: 141 VGQVAAEIRGYRPPEPYKGKGVKYADEFI 169
>sp|Q6ME49|RL6_PARUW 50S ribosomal protein L6 OS=Protochlamydia amoebophila
(strain UWE25) GN=rplF PE=3 SV=2
Length = 180
Score = 80 bits (196), Expect = 1e-014
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L+++GVGY RA QG LL L+LG+SH +L +P + V K+ ++ +G DK+
Sbjct: 83 FEKKLEMIGVGY--RAAVQGDLLDLQLGFSHPCKLPIPKGLAVKVDKNTLITISGFDKHL 140
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V QFAA VRS +PPE Y+GKGI Y E +
Sbjct: 141 VGQFAATVRSQRPPEPYQGKGIRYAGEFV 169
>sp|Q9ZAE4|RL6_THEMA 50S ribosomal protein L6 OS=Thermotoga maritima GN=rplF
PE=3 SV=2
Length = 184
Score = 80 bits (196), Expect = 1e-014
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +1
Query: 223 LKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNRVHQF 402
L+IVG+GY RA+ QG L + LGY+H V +P V++ N + +GIDK RV Q
Sbjct: 94 LEIVGIGY--RAQLQGNTLVMNLGYAHPVVYEIPSDVKIEVPAPNRIIVSGIDKQRVGQV 151
Query: 403 AAAVRSCKPPEVYKGKGIMYIDEVI 477
AA +R+ +PP VY GKGI Y+ EV+
Sbjct: 152 AAEIRAFRPPNVYTGKGIRYVGEVV 176
>sp|Q4G353|RK6_EMIHU 50S ribosomal protein L6, chloroplastic OS=Emiliania
huxleyi GN=rpl6 PE=3 SV=1
Length = 181
Score = 80 bits (195), Expect = 2e-014
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +1
Query: 223 LKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNRVHQF 402
L I GVGY RA+ G+ L L +GYSH V++ PPA+ V + +G++K V +F
Sbjct: 89 LTIAGVGY--RAQLDGKDLILNMGYSHPVKMVTPPALSVSVESPTSITVSGLEKEAVGEF 146
Query: 403 AAAVRSCKPPEVYKGKGIMYIDEVI 477
AA +RS +PPE YKGKGI Y EVI
Sbjct: 147 AAKIRSVRPPEPYKGKGIAYEGEVI 171
>sp|B7K234|RL6_CYAP8 50S ribosomal protein L6 OS=Cyanothece sp. (strain PCC
8801) GN=rplF PE=3 SV=1
Length = 179
Score = 80 bits (195), Expect = 2e-014
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L I GVGY RA+ QG L L +GYS VE+T+P ++V + +V +GIDK
Sbjct: 83 FEKRLSIQGVGY--RAQVQGTKLTLNVGYSKPVEMTMPAGIQVAVENNTLVIVSGIDKEI 140
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V +A +R+ +PPEVYKGKGI Y DE +
Sbjct: 141 VGNVSAEIRAVRPPEVYKGKGIRYSDEFV 169
>sp|A9ADK8|RL6_BURM1 50S ribosomal protein L6 OS=Burkholderia multivorans
(strain ATCC 17616 / 249) GN=rplF PE=3 SV=1
Length = 176
Score = 79 bits (193), Expect = 3e-014
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F R L +VGVGY RA+AQG L L LG+SH V +P V+ + GIDK +
Sbjct: 82 FERKLTLVGVGY--RAQAQGDKLNLSLGFSHPVVHQMPEGVKAETPTQTEIVIKGIDKQK 139
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA VR +PPE YKGKG+ Y DEV+
Sbjct: 140 VGQVAAEVRGYRPPEPYKGKGVRYADEVV 168
>sp|A3MRW9|RL6_BURM7 50S ribosomal protein L6 OS=Burkholderia mallei (strain
NCTC 10247) GN=rplF PE=3 SV=1
Length = 176
Score = 79 bits (192), Expect = 4e-014
Identities = 43/89 (48%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F R L +VGVGY RA+AQG L L LG+SH V +P ++ + GIDK +
Sbjct: 82 FERKLTLVGVGY--RAQAQGDKLNLSLGFSHPVVHQMPEGIKAETPTQTEIVIKGIDKQK 139
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
V Q AA VR +PPE YKGKG+ Y DEV+
Sbjct: 140 VGQVAAEVRGYRPPEPYKGKGVRYADEVV 168
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,621,414,376
Number of Sequences: 462764
Number of Extensions: 39621414376
Number of Successful Extensions: 367225502
Number of sequences better than 0.0: 0
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