BLASTX 7.6.2
Query= RU44444 /QuerySize=861
(860 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|A4FV97|RL1D1_BOVIN Ribosomal L1 domain-containing protein 1 O... 114 9e-025
sp|Q9UT32|RL1DB_SCHPO Putative ribosome biogenesis protein C8F11... 92 3e-018
>sp|A4FV97|RL1D1_BOVIN Ribosomal L1 domain-containing protein 1 OS=Bos taurus
GN=RSL1D1 PE=2 SV=1
Length = 482
Score = 114 bits (284), Expect = 9e-025
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 7/212 (3%)
Frame = +3
Query: 168 RNAVNALLKWRNSKSEAQKPDILSSDELLYLVVSLKKIPPKGRVNAYKIPLPTPLHSQVT 347
+ AV ALL S+ A +L+ +E +L+V L KIP K ++ LP + S +
Sbjct: 35 KKAVEALLAHSRSRKNANGL-LLNENENFFLMVVLWKIPSKEL--RVRLSLPHGIRSDLA 91
Query: 348 EFCLIYDDRPKSKLTKAQIQAKIKADN---LPVVKILKYTKLKSDYKAFESKRKLLNSYD 518
+ CL D P + + K +N + +I+ + LK +YKA+E+K +LL S+D
Sbjct: 92 DVCLFTKDEPNLSSEQTERYYKKLLNNHGIKTISQIIPFRTLKKEYKAYEAKLRLLGSFD 151
Query: 519 VFLADKQIVPLLPRLIGKQFFKKKKIPVPVDLLHKNWKEQIDRICGSALLFLS-TGTCSV 695
F+ D +I LLP +G+ F+ +KK+PV V+L K +I+ G +L +S +G+CS
Sbjct: 152 FFITDARIRRLLPSHLGRHFYNRKKVPVSVNLQSKTLSREINDCIGGTVLNISKSGSCST 211
Query: 696 VRVARTSMREEEI.ENVVSAISGIVDIVP.NW 791
+R+ T M + I ENVV+ + +P W
Sbjct: 212 IRIGHTGMPIQHIVENVVAVAKSLSQKLPEKW 243
>sp|Q9UT32|RL1DB_SCHPO Putative ribosome biogenesis protein C8F11.04
OS=Schizosaccharomyces pombe GN=SPAC8F11.04 PE=2 SV=1
Length = 373
Score = 92 bits (228), Expect = 3e-018
Identities = 60/197 (30%), Positives = 107/197 (54%), Gaps = 18/197 (9%)
Frame = +3
Query: 201 NSKSEAQKPDILSSDE-----LLYLVVSLKKIPPKGRVNAYKIPLPTPLHSQVTEFCLIY 365
N SE++K ++L ++ + + +LK I ++ YKI + P+ +E CLI
Sbjct: 32 NIDSESKKTNLLEDEQDDIEPVWLQLATLKFIGNNRKLIPYKIAIKNPVIPSSSEACLIV 91
Query: 366 DD--RPKSKLTKAQIQAKIKADNLPVVKILKYTKLKSDYKAFESKRKLLNSYDVFLADKQ 539
D R L +K+ V +++ +KLK+ + ++E KR+L + +D+FLAD +
Sbjct: 92 KDPQRVYKDLVNEAGLSKV------VTRVIGLSKLKAKWNSYEQKRQLRDQFDIFLADDR 145
Query: 540 IVPLLPRLIGKQFFKKKKIPVPVDLLHKNWKEQIDRICGSA--LLFLSTGTCS--VVRVA 707
++P+LPR++GK F++K K+PVPV + K EQ+ R SA + ++ CS +++
Sbjct: 146 VIPMLPRILGKTFYQKSKVPVPVK-ISKGTAEQLKREVVSAYGATYFNSAPCSSFMIKCG 204
Query: 708 RTSMREEEI.ENVVSAI 758
S E+ ENV S +
Sbjct: 205 HVSNTSTELAENVESIL 221
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,621,414,376
Number of Sequences: 462764
Number of Extensions: 39621414376
Number of Successful Extensions: 367225502
Number of sequences better than 0.0: 0
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