BLASTX 7.6.2
Query= RU44517 /QuerySize=420
(419 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9LD90|DKC1_ARATH H/ACA ribonucleoprotein complex subunit 4 O... 134 9e-032
sp|Q54T81|DKC1_DICDI Probable H/ACA ribonucleoprotein complex su... 115 7e-026
sp|P40615|DKC1_RAT H/ACA ribonucleoprotein complex subunit 4 OS=... 111 8e-025
sp|O43101|CBF5_CANAL Centromere/microtubule-binding protein CBF5... 110 2e-024
sp|Q9ESX5|DKC1_MOUSE H/ACA ribonucleoprotein complex subunit 4 O... 109 3e-024
sp|O14007|CBF5_SCHPO H/ACA ribonucleoprotein complex subunit 4 O... 109 4e-024
sp|Q5ZJH9|DKC1_CHICK H/ACA ribonucleoprotein complex subunit 4 O... 107 1e-023
sp|P33322|CBF5_YEAST H/ACA ribonucleoprotein complex subunit 4 O... 106 3e-023
sp|O13473|CBF5_KLULA Centromere/microtubule-binding protein CBF5... 106 3e-023
sp|O60832|DKC1_HUMAN H/ACA ribonucleoprotein complex subunit 4 O... 106 5e-023
sp|O43100|CBF5_EMENI Centromere/microtubule-binding protein CBF5... 104 1e-022
sp|O43102|CBF5_ASPFU Centromere/microtubule-binding protein cbf5... 104 2e-022
sp|O44081|DKC1_DROME H/ACA ribonucleoprotein complex subunit 4 O... 100 2e-021
sp|Q60YA8|DKC1_CAEBR Putative H/ACA ribonucleoprotein complex su... 92 5e-019
sp|O17919|DKC1_CAEEL Putative H/ACA ribonucleoprotein complex su... 92 5e-019
>sp|Q9LD90|DKC1_ARATH H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis
thaliana GN=NAP57 PE=1 SV=1
Length = 565
Score = 134 bits (337), Expect = 9e-032
Identities = 60/70 (85%), Positives = 66/70 (94%)
Frame = +1
Query: 205 DYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLNL 384
DYMIKPQS TP++DTSQWPILLKNYDRLNVR GHYTP+ +G+SPLKRPL EYIRYGV+NL
Sbjct: 26 DYMIKPQSFTPAIDTSQWPILLKNYDRLNVRTGHYTPISAGHSPLKRPLQEYIRYGVINL 85
Query: 385 DKPANPSSHE 414
DKPANPSSHE
Sbjct: 86 DKPANPSSHE 95
>sp|Q54T81|DKC1_DICDI Probable H/ACA ribonucleoprotein complex subunit 4
OS=Dictyostelium discoideum GN=nola4 PE=2 SV=1
Length = 540
Score = 115 bits (286), Expect = 7e-026
Identities = 48/70 (68%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Frame = +1
Query: 205 DYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLNL 384
+ +IKP+ TP LDTS+WP+LLKNYD+L+VR GHYTP+P+G+SPLKRP+ EY++YG++NL
Sbjct: 20 EQVIKPE-KTPILDTSKWPLLLKNYDQLSVRTGHYTPIPNGHSPLKRPIKEYVKYGIINL 78
Query: 385 DKPANPSSHE 414
DKP+NPSSHE
Sbjct: 79 DKPSNPSSHE 88
>sp|P40615|DKC1_RAT H/ACA ribonucleoprotein complex subunit 4 OS=Rattus
norvegicus GN=Dkc1 PE=1 SV=4
Length = 509
Score = 111 bits (277), Expect = 8e-025
Identities = 47/71 (66%), Positives = 59/71 (83%)
Frame = +1
Query: 202 QDYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLN 381
+D++IKP+S LDTSQWP+LLKN+DRLNVR HYTP+P G +PLKR + EY+R G +N
Sbjct: 35 EDFLIKPESKAAQLDTSQWPLLLKNFDRLNVRTTHYTPIPCGSNPLKREIGEYVRTGFIN 94
Query: 382 LDKPANPSSHE 414
LDKP+NPSSHE
Sbjct: 95 LDKPSNPSSHE 105
>sp|O43101|CBF5_CANAL Centromere/microtubule-binding protein CBF5 OS=Candida
albicans GN=CBF5 PE=3 SV=1
Length = 479
Score = 110 bits (273), Expect = 2e-024
Identities = 47/71 (66%), Positives = 60/71 (84%)
Frame = +1
Query: 202 QDYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLN 381
+DY+IKP+S +PS DTSQWP+LLKNYD+L VR GHYTP+P+G +PL R + Y+ GV+N
Sbjct: 5 EDYIIKPESVSPSNDTSQWPLLLKNYDKLLVRSGHYTPIPAGSAPLNRDIKSYVSSGVIN 64
Query: 382 LDKPANPSSHE 414
LDKP+NPSSHE
Sbjct: 65 LDKPSNPSSHE 75
>sp|Q9ESX5|DKC1_MOUSE H/ACA ribonucleoprotein complex subunit 4 OS=Mus musculus
GN=Dkc1 PE=1 SV=3
Length = 509
Score = 109 bits (272), Expect = 3e-024
Identities = 46/71 (64%), Positives = 59/71 (83%)
Frame = +1
Query: 202 QDYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLN 381
++++IKP+S LDTSQWP+LLKN+D+LNVR HYTPLP G +PLKR + +YIR G +N
Sbjct: 34 EEFLIKPESKVAQLDTSQWPLLLKNFDKLNVRTAHYTPLPCGSNPLKREIGDYIRTGFIN 93
Query: 382 LDKPANPSSHE 414
LDKP+NPSSHE
Sbjct: 94 LDKPSNPSSHE 104
>sp|O14007|CBF5_SCHPO H/ACA ribonucleoprotein complex subunit 4
OS=Schizosaccharomyces pombe GN=cbf5 PE=2 SV=1
Length = 474
Score = 109 bits (271), Expect = 4e-024
Identities = 47/71 (66%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
Frame = +1
Query: 205 DYMIKPQSSTPS-LDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLN 381
D+MIKP++++ S +DT++WP+LLKN+D+L VR GHYTP+P G +PLKRP+AEY+ GV+N
Sbjct: 9 DFMIKPEATSASKIDTAEWPLLLKNFDKLLVRTGHYTPIPCGNNPLKRPIAEYVSSGVIN 68
Query: 382 LDKPANPSSHE 414
LDKPANPSSHE
Sbjct: 69 LDKPANPSSHE 79
>sp|Q5ZJH9|DKC1_CHICK H/ACA ribonucleoprotein complex subunit 4 OS=Gallus gallus
GN=DKC1 PE=2 SV=1
Length = 516
Score = 107 bits (267), Expect = 1e-023
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = +1
Query: 202 QDYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLN 381
++++IKP+S LDTSQWP+LLKN+D+LNV HYTPLPSG +PLKR +++Y+R G +N
Sbjct: 32 EEFLIKPESRVAQLDTSQWPLLLKNFDKLNVLTTHYTPLPSGANPLKREISDYVRSGFIN 91
Query: 382 LDKPANPSSHE 414
LDKP+NPSSHE
Sbjct: 92 LDKPSNPSSHE 102
>sp|P33322|CBF5_YEAST H/ACA ribonucleoprotein complex subunit 4 OS=Saccharomyces
cerevisiae GN=CBF5 PE=1 SV=1
Length = 483
Score = 106 bits (264), Expect = 3e-023
Identities = 46/71 (64%), Positives = 60/71 (84%)
Frame = +1
Query: 202 QDYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLN 381
+D++IKP+++ S DTS+WP+LLKN+D+L VR GHYTP+P+G SPLKR L YI GV+N
Sbjct: 4 EDFVIKPEAAGASTDTSEWPLLLKNFDKLLVRSGHYTPIPAGSSPLKRDLKSYISSGVIN 63
Query: 382 LDKPANPSSHE 414
LDKP+NPSSHE
Sbjct: 64 LDKPSNPSSHE 74
>sp|O13473|CBF5_KLULA Centromere/microtubule-binding protein CBF5
OS=Kluyveromyces lactis GN=CBF5 PE=3 SV=1
Length = 474
Score = 106 bits (263), Expect = 3e-023
Identities = 46/73 (63%), Positives = 61/73 (83%)
Frame = +1
Query: 196 VDQDYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGV 375
+ +++IKP+S +PS +TS+WP+LLK+YD+L VR GHYTP+P+G SPLKR L YI GV
Sbjct: 1 MSDEFVIKPESVSPSSNTSEWPLLLKDYDKLLVRSGHYTPIPAGASPLKRDLKSYISSGV 60
Query: 376 LNLDKPANPSSHE 414
+NLDKP+NPSSHE
Sbjct: 61 INLDKPSNPSSHE 73
>sp|O60832|DKC1_HUMAN H/ACA ribonucleoprotein complex subunit 4 OS=Homo sapiens
GN=DKC1 PE=1 SV=3
Length = 514
Score = 106 bits (262), Expect = 5e-023
Identities = 45/71 (63%), Positives = 58/71 (81%)
Frame = +1
Query: 202 QDYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLN 381
++++IKP+S LDTSQWP+LLKN+D+LNVR HYTPL G +PLKR + +YIR G +N
Sbjct: 34 EEFLIKPESKVAKLDTSQWPLLLKNFDKLNVRTTHYTPLACGSNPLKREIGDYIRTGFIN 93
Query: 382 LDKPANPSSHE 414
LDKP+NPSSHE
Sbjct: 94 LDKPSNPSSHE 104
>sp|O43100|CBF5_EMENI Centromere/microtubule-binding protein CBF5 OS=Emericella
nidulans GN=cbf5 PE=2 SV=1
Length = 481
Score = 104 bits (258), Expect = 1e-022
Identities = 44/70 (62%), Positives = 57/70 (81%)
Frame = +1
Query: 205 DYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLNL 384
DY IKP+++ +++T WP+LLKNYD+L VR GH+TP+P+G SPLKR L YI GV+NL
Sbjct: 6 DYTIKPEATASNINTEDWPLLLKNYDKLMVRTGHFTPIPAGSSPLKRDLKSYINSGVINL 65
Query: 385 DKPANPSSHE 414
DKP+NPSSHE
Sbjct: 66 DKPSNPSSHE 75
>sp|O43102|CBF5_ASPFU Centromere/microtubule-binding protein cbf5 OS=Aspergillus
fumigatus GN=cbf5 PE=2 SV=1
Length = 487
Score = 104 bits (257), Expect = 2e-022
Identities = 44/72 (61%), Positives = 56/72 (77%)
Frame = +1
Query: 199 DQDYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVL 378
+ DY IKP++ ++ T WP+LLKNYD+L VR GH+TP+P+G SPLKR L YI GV+
Sbjct: 9 EMDYTIKPEAGASNISTEDWPLLLKNYDKLMVRTGHFTPIPAGCSPLKRDLKSYISSGVI 68
Query: 379 NLDKPANPSSHE 414
NLDKP+NPSSHE
Sbjct: 69 NLDKPSNPSSHE 80
>sp|O44081|DKC1_DROME H/ACA ribonucleoprotein complex subunit 4 OS=Drosophila
melanogaster GN=Nop60B PE=1 SV=1
Length = 508
Score = 100 bits (248), Expect = 2e-021
Identities = 43/70 (61%), Positives = 54/70 (77%)
Frame = +1
Query: 205 DYMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLNL 384
++ IKP S LDTSQWP+LLKN+D+LN+R HYTPL G SPL R + EY++ G +NL
Sbjct: 33 NFQIKPSSKIAELDTSQWPLLLKNFDKLNIRSNHYTPLAHGSSPLNRDIKEYMKTGFINL 92
Query: 385 DKPANPSSHE 414
DKP+NPSSHE
Sbjct: 93 DKPSNPSSHE 102
>sp|Q60YA8|DKC1_CAEBR Putative H/ACA ribonucleoprotein complex subunit 4
OS=Caenorhabditis briggsae GN=CBG18316 PE=3 SV=1
Length = 445
Score = 92 bits (227), Expect = 5e-019
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +1
Query: 208 YMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLNLD 387
+ + + T LD SQWP+LLKNYD+LNVR HYTP G SPLKR + YI G NLD
Sbjct: 24 FQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPHVEGVSPLKRDIKNYISSGFFNLD 83
Query: 388 KPANPSSHE 414
KP+NPSSHE
Sbjct: 84 KPSNPSSHE 92
>sp|O17919|DKC1_CAEEL Putative H/ACA ribonucleoprotein complex subunit 4
OS=Caenorhabditis elegans GN=K01G5.5 PE=2 SV=1
Length = 445
Score = 92 bits (227), Expect = 5e-019
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +1
Query: 208 YMIKPQSSTPSLDTSQWPILLKNYDRLNVRIGHYTPLPSGYSPLKRPLAEYIRYGVLNLD 387
+ + + T LD SQWP+LLKNYD+LNVR HYTP G SPLKR + YI G NLD
Sbjct: 24 FQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPHVEGVSPLKRDIKNYISSGFFNLD 83
Query: 388 KPANPSSHE 414
KP+NPSSHE
Sbjct: 84 KPSNPSSHE 92
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,621,414,376
Number of Sequences: 462764
Number of Extensions: 39621414376
Number of Successful Extensions: 367225502
Number of sequences better than 0.0: 0
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