BLASTX 7.6.2
Query= RU44650 /QuerySize=764
(763 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1 93 1e-018
sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1 89 2e-017
sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE... 85 4e-016
sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1 84 8e-016
sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=M... 84 8e-016
sp|Q32L31|HMGB3_BOVIN High mobility group protein B3 OS=Bos taur... 82 3e-015
sp|P40618|HMGB3_CHICK High mobility group protein B3 OS=Gallus g... 80 1e-014
sp|O54879|HMGB3_MOUSE High mobility group protein B3 OS=Mus musc... 80 2e-014
sp|O15347|HMGB3_HUMAN High mobility group protein B3 OS=Homo sap... 79 2e-014
sp|P36194|HMGB1_CHICK High mobility group protein B1 OS=Gallus g... 79 3e-014
sp|P07746|HMGT_ONCMY High mobility group-T protein OS=Oncorhynch... 77 8e-014
sp|P40673|HMGB2_BOVIN High mobility group protein B2 OS=Bos taur... 74 8e-013
sp|P26583|HMGB2_HUMAN High mobility group protein B2 OS=Homo sap... 74 8e-013
sp|P17741|HMGB2_PIG High mobility group protein B2 OS=Sus scrofa... 74 8e-013
sp|P52925|HMGB2_RAT High mobility group protein B2 OS=Rattus nor... 74 8e-013
sp|P30681|HMGB2_MOUSE High mobility group protein B2 OS=Mus musc... 72 3e-012
sp|P26584|HMGB2_CHICK High mobility group protein B2 OS=Gallus g... 70 1e-011
sp|Q08943|SSRP1_MOUSE FACT complex subunit SSRP1 OS=Mus musculus... 69 3e-011
sp|Q65WY8|SSP1B_ORYSJ FACT complex subunit SSRP1-B OS=Oryza sati... 68 5e-011
sp|Q9LEF5|SSRP1_MAIZE FACT complex subunit SSRP1 OS=Zea mays GN=... 68 6e-011
sp|Q04931|SSRP1_RAT FACT complex subunit SSRP1 OS=Rattus norvegi... 68 6e-011
sp|Q04678|SSRP1_CHICK FACT complex subunit SSRP1 OS=Gallus gallu... 67 1e-010
sp|Q9N1Q5|SP100_HYLLA Nuclear autoantigen Sp-100 (Fragment) OS=H... 66 2e-010
sp|O01683|SSP1B_CAEEL FACT complex subunit ssrp1-B OS=Caenorhabd... 66 2e-010
sp|Q08945|SSRP1_HUMAN FACT complex subunit SSRP1 OS=Homo sapiens... 65 4e-010
sp|Q76IQ7|TOX2_RAT TOX high mobility group box family member 2 O... 64 9e-010
sp|P23497|SP100_HUMAN Nuclear autoantigen Sp-100 OS=Homo sapiens... 64 1e-009
sp|Q9N1Q7|SP100_PANTR Nuclear autoantigen Sp-100 (Fragment) OS=P... 64 1e-009
sp|Q9N1Q6|SP100_GORGO Nuclear autoantigen Sp-100 (Fragment) OS=G... 63 1e-009
sp|Q9W602|SSRP1_XENLA FACT complex subunit SSRP1 OS=Xenopus laev... 62 3e-009
>sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1
Length = 144
Score = 93 bits (230), Expect = 1e-018
Identities = 44/81 (54%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = +3
Query: 351 AKTDKVNKS-KDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTD 527
A T K K+ KDPN PKRP +AFF+FM DFRK YKE +P++K V +V K GG+KW +T
Sbjct: 21 ADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTA 80
Query: 528 EEKKPYMDKAAELKDEYKKTL 590
EK P++ KA + K EY+K L
Sbjct: 81 AEKAPFISKAEKRKQEYEKNL 101
>sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1
Length = 149
Score = 89 bits (220), Expect = 2e-017
Identities = 45/101 (44%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Frame = +3
Query: 297 TKKPPTE---RKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPD 467
+KK T+ KK + K K + KDPN PKRP +AFF+FM DFR+ YK+ +P+
Sbjct: 10 SKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPN 69
Query: 468 SKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
+K V V K GE+W +++EEK PY+D+A + K+EY+ TL
Sbjct: 70 NKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITL 110
>sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1
Length = 161
Score = 85 bits (209), Expect = 4e-016
Identities = 40/89 (44%), Positives = 54/89 (60%)
Frame = +3
Query: 324 KSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGG 503
KS AK K KDPN PKR +AFF+FM +FR+ +K+ NP +K V V K G
Sbjct: 19 KSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAG 78
Query: 504 EKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
E+W +++ EK PY+ KA +LK EY K +
Sbjct: 79 ERWKSLSESEKAPYVAKANKLKGEYNKAI 107
>sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1
Length = 152
Score = 84 bits (206), Expect = 8e-016
Identities = 39/95 (41%), Positives = 54/95 (56%)
Frame = +3
Query: 306 PPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKM 485
P K R K +KDPN PKRP +AFF+FM +FRK + + +P++K V
Sbjct: 15 PKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSA 74
Query: 486 VAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
V K G KW M+D EK PY+ K+ + K EY+K +
Sbjct: 75 VGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNM 109
>sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1
Length = 157
Score = 84 bits (206), Expect = 8e-016
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +3
Query: 345 KRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMT 524
K AK K KDPN PKR +AFF+FM +FRK +KE NP +K V V K G++W ++
Sbjct: 25 KPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLS 84
Query: 525 DEEKKPYMDKAAELKDEYKKTL 590
+ +K PY+ KA +LK EY K +
Sbjct: 85 ESDKAPYVAKANKLKLEYNKAI 106
>sp|Q32L31|HMGB3_BOVIN High mobility group protein B3 OS=Bos taurus GN=HMGB3
PE=2 SV=2
Length = 200
Score = 82 bits (201), Expect = 3e-015
Identities = 39/71 (54%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +3
Query: 372 KSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMD 551
K KDPNAPKRP + FFLF ++FR K ANP + VAK+ GE WN ++D EK+PY++
Sbjct: 86 KKKDPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYIN 144
Query: 552 KAAELKDEYKK 584
KAA+LK++Y+K
Sbjct: 145 KAAKLKEKYEK 155
>sp|P40618|HMGB3_CHICK High mobility group protein B3 OS=Gallus gallus GN=HMGB3
PE=2 SV=2
Length = 202
Score = 80 bits (196), Expect = 1e-014
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = +3
Query: 372 KSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMD 551
K KDPNAPKRP +AFFLF ++FR K NP + VAK+ GE WN ++D EK+PY +
Sbjct: 86 KKKDPNAPKRPPSAFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNN 144
Query: 552 KAAELKDEYKK 584
KAA+LK++Y+K
Sbjct: 145 KAAKLKEKYEK 155
>sp|O54879|HMGB3_MOUSE High mobility group protein B3 OS=Mus musculus GN=Hmgb3
PE=2 SV=3
Length = 200
Score = 80 bits (195), Expect = 2e-014
Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +3
Query: 372 KSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMD 551
K KDPNAPKRP + FFLF ++FR K NP + VAK+ GE WN ++D EK+PY+
Sbjct: 86 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYVT 144
Query: 552 KAAELKDEYKK 584
KAA+LK++Y+K
Sbjct: 145 KAAKLKEKYEK 155
>sp|O15347|HMGB3_HUMAN High mobility group protein B3 OS=Homo sapiens GN=HMGB3
PE=1 SV=4
Length = 200
Score = 79 bits (194), Expect = 2e-014
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = +3
Query: 372 KSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMD 551
K KDPNAPKRP + FFLF ++FR K NP + VAK+ GE WN + D EK+PY+
Sbjct: 86 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYIT 144
Query: 552 KAAELKDEYKK 584
KAA+LK++Y+K
Sbjct: 145 KAAKLKEKYEK 155
>sp|P36194|HMGB1_CHICK High mobility group protein B1 OS=Gallus gallus GN=HMGB1
PE=2 SV=2
Length = 201
Score = 79 bits (192), Expect = 3e-014
Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +3
Query: 372 KSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMD 551
K KDPNAPKRP + FFLF ++FR K NP + VAK+ GE WN ++D EK+PY +
Sbjct: 85 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNN 143
Query: 552 KAAELKDEYKK 584
KAA+LK++Y+K
Sbjct: 144 KAAKLKEKYEK 154
>sp|P07746|HMGT_ONCMY High mobility group-T protein OS=Oncorhynchus mykiss PE=2
SV=2
Length = 204
Score = 77 bits (189), Expect = 8e-014
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +3
Query: 354 KTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEE 533
K +K + KDPNAPKRP +AFF+F DFR K P + VAK+ GEKWN +T E+
Sbjct: 81 KGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAED 139
Query: 534 KKPYMDKAAELKDEYKKTL 590
K PY KA+ LK++Y+K +
Sbjct: 140 KVPYEKKASRLKEKYEKDI 158
>sp|P40673|HMGB2_BOVIN High mobility group protein B2 OS=Bos taurus GN=HMGB2
PE=1 SV=3
Length = 209
Score = 74 bits (180), Expect = 8e-013
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Frame = +3
Query: 138 PSLLRGKDGSAFARCDGC----QKNVPVALISFHNCSLDAKIKTNLEAQVVEKPSEVTKK 305
P+ RGK S C +K P + ++F S + + + E K
Sbjct: 6 PNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAK 65
Query: 306 PPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKM 485
R N K DK K KDPNAPKRP +AFFLF ++ R K +P +
Sbjct: 66 SDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGD 124
Query: 486 VAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
AK+ GE W+ + ++K+PY KAA+LK++Y+K +
Sbjct: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDI 159
>sp|P26583|HMGB2_HUMAN High mobility group protein B2 OS=Homo sapiens GN=HMGB2
PE=1 SV=2
Length = 209
Score = 74 bits (180), Expect = 8e-013
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Frame = +3
Query: 138 PSLLRGKDGSAFARCDGC----QKNVPVALISFHNCSLDAKIKTNLEAQVVEKPSEVTKK 305
P+ RGK S C +K P + ++F S + + + E K
Sbjct: 6 PNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAK 65
Query: 306 PPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKM 485
R N K DK K KDPNAPKRP +AFFLF ++ R K +P +
Sbjct: 66 SDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGD 124
Query: 486 VAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
AK+ GE W+ + ++K+PY KAA+LK++Y+K +
Sbjct: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDI 159
>sp|P17741|HMGB2_PIG High mobility group protein B2 OS=Sus scrofa GN=HMGB2 PE=1
SV=2
Length = 210
Score = 74 bits (180), Expect = 8e-013
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Frame = +3
Query: 138 PSLLRGKDGSAFARCDGC----QKNVPVALISFHNCSLDAKIKTNLEAQVVEKPSEVTKK 305
P+ RGK S C +K P + ++F S + + + E K
Sbjct: 6 PNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAK 65
Query: 306 PPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKM 485
R N K DK K KDPNAPKRP +AFFLF ++ R K +P +
Sbjct: 66 SDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGD 124
Query: 486 VAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
AK+ GE W+ + ++K+PY KAA+LK++Y+K +
Sbjct: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDI 159
>sp|P52925|HMGB2_RAT High mobility group protein B2 OS=Rattus norvegicus
GN=Hmgb2 PE=2 SV=2
Length = 210
Score = 74 bits (180), Expect = 8e-013
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Frame = +3
Query: 138 PSLLRGKDGSAFARCDGC----QKNVPVALISFHNCSLDAKIKTNLEAQVVEKPSEVTKK 305
P+ RGK S C +K P + ++F S + + + E K
Sbjct: 6 PNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAK 65
Query: 306 PPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKM 485
R N K DK K KDPNAPKRP +AFFLF ++ R K +P +
Sbjct: 66 SDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGD 124
Query: 486 VAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
AK+ GE W+ + ++K+PY KAA+LK++Y+K +
Sbjct: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDI 159
>sp|P30681|HMGB2_MOUSE High mobility group protein B2 OS=Mus musculus GN=Hmgb2
PE=1 SV=3
Length = 210
Score = 72 bits (175), Expect = 3e-012
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Frame = +3
Query: 138 PSLLRGKDGSAFARCDGC----QKNVPVALISFHNCSLDAKIKTNLEAQVVEKPSEVTKK 305
P+ RGK S C +K P + ++F S + + + E K
Sbjct: 6 PNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAK 65
Query: 306 PPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKM 485
R N K DK K KDPNAPKRP +AFFLF ++ R K +P +
Sbjct: 66 SDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHP-GLSIGD 124
Query: 486 VAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
AK+ GE W+ + ++K+PY KAA+LK++Y+K +
Sbjct: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDI 159
>sp|P26584|HMGB2_CHICK High mobility group protein B2 OS=Gallus gallus GN=HMGB2
PE=2 SV=2
Length = 207
Score = 70 bits (170), Expect = 1e-011
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +3
Query: 354 KTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEE 533
K +K K KDPNAPKRP +AFFLF ++ R K +P + AK+ GE W+ ++
Sbjct: 82 KGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHP-GLSIGDTAKKLGEMWSEQLAKD 140
Query: 534 KKPYMDKAAELKDEYKKTL 590
K+PY KAA+LK++Y+K +
Sbjct: 141 KQPYEQKAAKLKEKYEKDI 159
>sp|Q08943|SSRP1_MOUSE FACT complex subunit SSRP1 OS=Mus musculus GN=Ssrp1 PE=1
SV=2
Length = 708
Score = 69 bits (167), Expect = 3e-011
Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +3
Query: 240 DAKIKTNLEAQVVEKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFF 419
D+ + + + E K+ +R K ++ R K+ + K KDPNAPKRP++A+
Sbjct: 496 DSNASASSSSNEGDSDREEKKREQLKRAKMAKDRKSRRKSSEAKKGKDPNAPKRPMSAYM 555
Query: 420 LFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
L++N R+ K +P + ++K+ GE W M+ E+K+ + KA + + EY+K +
Sbjct: 556 LWLNASREKIKSDHP-GISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>sp|Q65WY8|SSP1B_ORYSJ FACT complex subunit SSRP1-B OS=Oryza sativa subsp.
japonica GN=SSRP1-B PE=2 SV=1
Length = 640
Score = 68 bits (165), Expect = 5e-011
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +3
Query: 240 DAKIKTNLEAQVVEKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFF 419
DA + + + +K + +K P +RK A+ ++ K K KDPNAPKR + F
Sbjct: 507 DASLSGGEKEKSSKKEASSSKAPLKKRKPKGGDAAEGSEKRKPKKKKDPNAPKRAIAPFM 566
Query: 420 LFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEY 578
F R K +NP+ + +AK+ GE+W MT EEK+PY++++ K Y
Sbjct: 567 YFSKAERANLKNSNPELATTE-IAKKLGERWQKMTAEEKQPYVEQSQVDKKRY 618
>sp|Q9LEF5|SSRP1_MAIZE FACT complex subunit SSRP1 OS=Zea mays GN=SSRP1 PE=1
SV=1
Length = 639
Score = 68 bits (164), Expect = 6e-011
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +3
Query: 291 EVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDS 470
E + P +++K + + + K K KDPNAPKR +T F F R K +NPD
Sbjct: 523 EASSSKPVQKRKHKARDDEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDL 582
Query: 471 KGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKK 584
+ +AK+ GE W M+ EEK+PY+ +A K Y+K
Sbjct: 583 PTTE-IAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYEK 619
>sp|Q04931|SSRP1_RAT FACT complex subunit SSRP1 OS=Rattus norvegicus GN=Ssrp1
PE=1 SV=2
Length = 709
Score = 68 bits (164), Expect = 6e-011
Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +3
Query: 240 DAKIKTNLEAQVVEKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFF 419
D+ + + + E K+ +R K ++ R K+ + K KDPNAPKRP++A+
Sbjct: 496 DSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRKKSSEGKKGKDPNAPKRPMSAYM 555
Query: 420 LFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
L++N R+ K +P + ++K+ GE W M+ E+K+ + KA + + EY+K +
Sbjct: 556 LWLNASREKIKSDHP-GISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>sp|Q04678|SSRP1_CHICK FACT complex subunit SSRP1 OS=Gallus gallus GN=SSRP1 PE=2
SV=2
Length = 706
Score = 67 bits (161), Expect = 1e-010
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = +3
Query: 288 SEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPD 467
S+ +K P ++ K + R K + K KDPNAPKRP++A+ L++N R+ K +P
Sbjct: 510 SDRGEKKPAKKAKIVKDRKPRKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHP- 568
Query: 468 SKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
+ ++K+ GE W M+ E+K+ + KA + K +Y+K +
Sbjct: 569 GISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAM 609
>sp|Q9N1Q5|SP100_HYLLA Nuclear autoantigen Sp-100 (Fragment) OS=Hylobates lar
GN=SP100 PE=2 SV=1
Length = 242
Score = 66 bits (160), Expect = 2e-010
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +3
Query: 351 AKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDE 530
+K +K K KDPNAPKRP AFFLF +++R K +P + V K+ E WN
Sbjct: 129 SKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHP-GLSIDDVVKKLAEMWNNTAAA 187
Query: 531 EKKPYMDKAAELKDEYKKTL 590
+K+ Y KAA+LK++YKK +
Sbjct: 188 DKQFYEKKAAKLKEKYKKDI 207
>sp|O01683|SSP1B_CAEEL FACT complex subunit ssrp1-B OS=Caenorhabditis elegans
GN=hmg-3 PE=2 SV=1
Length = 689
Score = 66 bits (160), Expect = 2e-010
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Frame = +3
Query: 276 VEKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKE 455
+E + +K+ +R+K +P K K K+KDPN PKR TA+ ++ N R + KE
Sbjct: 523 IEPKKKESKEKKNKREKKEKP-VKEKAVKKGKKTKDPNEPKRATTAYIIWFNANRNSMKE 581
Query: 456 ANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYK 581
D + VAK+ G KW M+ ++KK + DKAA+ K Y+
Sbjct: 582 ---DGDTLGDVAKKAGAKWKSMSADDKKEWNDKAAQDKARYE 620
>sp|Q08945|SSRP1_HUMAN FACT complex subunit SSRP1 OS=Homo sapiens GN=SSRP1 PE=1
SV=1
Length = 709
Score = 65 bits (157), Expect = 4e-010
Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +3
Query: 300 KKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGV 479
K+ ++ K ++ R K +V K KDPNAPKRP++A+ L++N R+ K +P +
Sbjct: 516 KRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHP-GISI 574
Query: 480 KMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
++K+ GE W M+ E+K+ + KA + + +Y+K +
Sbjct: 575 TDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAM 611
>sp|Q76IQ7|TOX2_RAT TOX high mobility group box family member 2 OS=Rattus
norvegicus GN=Tox2 PE=2 SV=1
Length = 473
Score = 64 bits (154), Expect = 9e-010
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Frame = +3
Query: 279 EKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEA 458
E+ S+ K E++ S+ P K+AK K K KDPN P++P++A+ LF D + A K
Sbjct: 167 EEESDAHFKISGEKRPSTDP-GKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 225
Query: 459 NPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
NP S V+K W+ + +E+K+ Y K K EY K L
Sbjct: 226 NP-SATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKAL 268
>sp|P23497|SP100_HUMAN Nuclear autoantigen Sp-100 OS=Homo sapiens GN=SP100 PE=1
SV=3
Length = 879
Score = 64 bits (153), Expect = 1e-009
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Frame = +3
Query: 144 LLRGKDGSAFARCDGCQKNVPVALISF----HNCSLDAKIKTNLEAQVVEKPSEVTKKPP 311
+L + + C+ +K P A + F CS K E E ++ K
Sbjct: 686 ILESHNNTLVDPCEEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHY 745
Query: 312 TERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVA 491
K+ P K +K K KDPNAPKRP AFFLF +++R K +P + V
Sbjct: 746 EREMKTYIP----PKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHP-GLSIDDVV 800
Query: 492 KEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
K+ WN +K+ Y KAA+LK++YKK +
Sbjct: 801 KKLAGMWNNTAAADKQFYEKKAAKLKEKYKKDI 833
>sp|Q9N1Q7|SP100_PANTR Nuclear autoantigen Sp-100 (Fragment) OS=Pan troglodytes
GN=SP100 PE=2 SV=1
Length = 215
Score = 64 bits (153), Expect = 1e-009
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +3
Query: 354 KTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEE 533
K +K K KDPNAPKRP AFFLF +++R K +P + V K+ WN +
Sbjct: 111 KGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHP-GLSIDDVVKKLAGMWNNTAASD 169
Query: 534 KKPYMDKAAELKDEYKKTL 590
K+ Y KAA+LK++YKK +
Sbjct: 170 KQFYEKKAAKLKEKYKKDI 188
>sp|Q9N1Q6|SP100_GORGO Nuclear autoantigen Sp-100 (Fragment) OS=Gorilla gorilla
gorilla GN=SP100 PE=2 SV=1
Length = 225
Score = 63 bits (152), Expect = 1e-009
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +3
Query: 354 KTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEE 533
K +K K KDPNAPKRP AFFLF +++R K +P + V K+ WN +
Sbjct: 105 KGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHP-GLSIDDVVKKLAGMWNNTAAAD 163
Query: 534 KKPYMDKAAELKDEYKKTL 590
K+ Y KAA+LK++YKK +
Sbjct: 164 KQFYEKKAAKLKEKYKKDI 182
>sp|Q9W602|SSRP1_XENLA FACT complex subunit SSRP1 OS=Xenopus laevis GN=ssrp1
PE=1 SV=1
Length = 693
Score = 62 bits (150), Expect = 3e-009
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Frame = +3
Query: 219 SFHNCSLDAKIKTNLEAQVVEKPSEVTKKPPTERKKSSQ-----PNAKRAKTDKVNKSKD 383
SF+ + ++ ++ S T++KK ++ K K + K+KD
Sbjct: 478 SFNPGEEEEEVAEEFDSNPSASSSSADSDDDTDKKKDAKRAKIVKQKKPRKKPEAKKTKD 537
Query: 384 PNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAE 563
P APKRP++A+ L++N R+ K NP + ++K+ GE W M+ ++K+ + +A E
Sbjct: 538 PGAPKRPMSAYMLWLNASREKIKSENP-GISITDLSKKAGEIWKNMSRDKKEEWDRRAEE 596
Query: 564 LKDEYKKTL 590
K +Y+K +
Sbjct: 597 AKRDYEKAM 605
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,621,414,376
Number of Sequences: 462764
Number of Extensions: 39621414376
Number of Successful Extensions: 367225502
Number of sequences better than 0.0: 0
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