BLASTX 7.6.2
Query= RU45100 /QuerySize=437
(436 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9M9M9|NDUAC_ARATH Probable NADH dehydrogenase [ubiquinone] 1... 200 4e-051
sp|Q54MV7|NDUAC_DICDI NADH dehydrogenase [ubiquinone] 1 alpha su... 76 7e-014
sp|Q9N2W7|NDUAC_CAEEL Probable NADH dehydrogenase [ubiquinone] 1... 71 2e-012
sp|Q0MQ85|NDUAC_PONAB NADH dehydrogenase [ubiquinone] 1 alpha su... 67 3e-011
sp|O97725|NDUAC_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha su... 67 4e-011
sp|Q0MQ86|NDUAC_GORGO NADH dehydrogenase [ubiquinone] 1 alpha su... 66 5e-011
sp|Q9UI09|NDUAC_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha su... 66 5e-011
sp|Q0MQ87|NDUAC_PANTR NADH dehydrogenase [ubiquinone] 1 alpha su... 66 5e-011
sp|Q7TMF3|NDUAC_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha su... 63 4e-010
>sp|Q9M9M9|NDUAC_ARATH Probable NADH dehydrogenase [ubiquinone] 1 alpha
subcomplex subunit 12 OS=Arabidopsis thaliana GN=At3g03100 PE=1 SV=1
Length = 159
Score = 200 bits (506), Expect = 4e-051
Identities = 93/121 (76%), Positives = 103/121 (85%), Gaps = 1/121 (0%)
Frame = +3
Query: 69 TVVKSVLQAIREQGLRSLLREAREEGYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYE 248
TV KS L+AIRE+GL +R REEG+++CL DGNLLQTKIHNIGA LVGVDK GNKYY+
Sbjct: 4 TVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 63
Query: 249 KL-DTQYGRHRWVEYVEKGFFNASQVPPEWHGWLHYITDHTGDELLMLKPQRYHLEHKEN 425
KL DTQYGRHRWVEY K +NASQVP EWHGWLH+ITDHTGDELL LKP+RY LEHKEN
Sbjct: 64 KLGDTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKEN 123
Query: 426 F 428
F
Sbjct: 124 F 124
>sp|Q54MV7|NDUAC_DICDI NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Dictyostelium discoideum GN=ndufa12 PE=2 SV=2
Length = 138
Score = 76 bits (185), Expect = 7e-014
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +3
Query: 210 LVGVDKVGNKYYEKLDTQYGRHRWVEYVEKGFFNASQVPPEWHGWLHYITDHTGDELLML 389
LVGVDKVGN+YYE YGRHRWVEY + + + +PPE+H W+H+++D E+L
Sbjct: 34 LVGVDKVGNRYYENRQEIYGRHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPSEMLPF 93
Query: 390 KP 395
P
Sbjct: 94 SP 95
>sp|Q9N2W7|NDUAC_CAEEL Probable NADH dehydrogenase [ubiquinone] 1 alpha
subcomplex subunit 12 OS=Caenorhabditis elegans GN=Y94H6A.8 PE=2 SV=2
Length = 146
Score = 71 bits (173), Expect = 2e-012
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 9/77 (11%)
Frame = +3
Query: 210 LVGVDKVGNKYYEKLDTQYGRHRWVEYVEKGF--FNASQVPPEWHGWLHYITDHTGDELL 383
LVG D GN+YYE R+RWVE+ +K + ++A+QVPPEWH WLH+IT D+
Sbjct: 43 LVGSDNFGNRYYENNAYFVPRNRWVEFPDKVWLDYDATQVPPEWHSWLHHIT----DDAP 98
Query: 384 MLKP---QRYHLEHKEN 425
+KP Q + LEHKEN
Sbjct: 99 SVKPPPTQDWVLEHKEN 115
>sp|Q0MQ85|NDUAC_PONAB NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Pongo abelii GN=NDUFA12 PE=2 SV=1
Length = 145
Score = 67 bits (162), Expect = 3e-011
Identities = 40/94 (42%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Frame = +3
Query: 102 EQGLRSLLREAREEGYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYEKLDTQYGRHRW 281
++GL+ + GYL+ +T +G LVG DK GNKYYE +GRHRW
Sbjct: 8 KRGLQRITGHGGLRGYLRV-----FFRTNDAKVGT-LVGEDKYGNKYYEDNKQFFGRHRW 61
Query: 282 VEYVE----KGFF---NASQVPPEWHGWLHYITD 362
V Y K F + S VPPEWH WLH ITD
Sbjct: 62 VVYTTEMNGKNTFWDVDGSMVPPEWHHWLHSITD 95
>sp|O97725|NDUAC_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Bos taurus GN=NDUFA12 PE=1 SV=1
Length = 145
Score = 67 bits (161), Expect = 4e-011
Identities = 39/94 (41%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Frame = +3
Query: 102 EQGLRSLLREAREEGYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYEKLDTQYGRHRW 281
++GL+ + GYL+ L N ++ LVG DK GNKYYE +GRHRW
Sbjct: 8 KRGLQQVSGHGGLRGYLRVLFRANDVRV------GTLVGEDKYGNKYYEDNKQFFGRHRW 61
Query: 282 VEYVE----KGFF---NASQVPPEWHGWLHYITD 362
V Y K F + S VPPEWH WLH +TD
Sbjct: 62 VIYTTEMNGKNTFWDVDGSMVPPEWHRWLHCMTD 95
>sp|Q0MQ86|NDUAC_GORGO NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Gorilla gorilla gorilla GN=NDUFA12 PE=2 SV=1
Length = 145
Score = 66 bits (160), Expect = 5e-011
Identities = 39/94 (41%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Frame = +3
Query: 102 EQGLRSLLREAREEGYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYEKLDTQYGRHRW 281
++GL+ + GYL+ +T +G LVG DK GNKYYE +GRHRW
Sbjct: 8 KRGLQQITGHGGLRGYLRV-----FFRTNDAKVGT-LVGEDKYGNKYYEDNKQFFGRHRW 61
Query: 282 VEYVE----KGFF---NASQVPPEWHGWLHYITD 362
V Y K F + S VPPEWH WLH +TD
Sbjct: 62 VVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMTD 95
>sp|Q9UI09|NDUAC_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Homo sapiens GN=NDUFA12 PE=1 SV=1
Length = 145
Score = 66 bits (160), Expect = 5e-011
Identities = 39/94 (41%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Frame = +3
Query: 102 EQGLRSLLREAREEGYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYEKLDTQYGRHRW 281
++GL+ + GYL+ +T +G LVG DK GNKYYE +GRHRW
Sbjct: 8 KRGLQQITGHGGLRGYLRV-----FFRTNDAKVGT-LVGEDKYGNKYYEDNKQFFGRHRW 61
Query: 282 VEYVE----KGFF---NASQVPPEWHGWLHYITD 362
V Y K F + S VPPEWH WLH +TD
Sbjct: 62 VVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMTD 95
>sp|Q0MQ87|NDUAC_PANTR NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Pan troglodytes GN=NDUFA12 PE=2 SV=1
Length = 145
Score = 66 bits (160), Expect = 5e-011
Identities = 39/94 (41%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Frame = +3
Query: 102 EQGLRSLLREAREEGYLKCLADGNLLQTKIHNIGARLVGVDKVGNKYYEKLDTQYGRHRW 281
++GL+ + GYL+ +T +G LVG DK GNKYYE +GRHRW
Sbjct: 8 KRGLQQITGHGGLRGYLRV-----FFRTNDAKVGT-LVGEDKYGNKYYEDNKQFFGRHRW 61
Query: 282 VEYVE----KGFF---NASQVPPEWHGWLHYITD 362
V Y K F + S VPPEWH WLH +TD
Sbjct: 62 VVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMTD 95
>sp|Q7TMF3|NDUAC_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 12 OS=Mus musculus GN=Ndufa12 PE=1 SV=2
Length = 145
Score = 63 bits (152), Expect = 4e-010
Identities = 32/58 (55%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Frame = +3
Query: 210 LVGVDKVGNKYYEKLDTQYGRHRWVEYVE----KGFF---NASQVPPEWHGWLHYITD 362
LVG DK GNKYYE +GRHRWV Y K F + S VPPEWH WLH +TD
Sbjct: 38 LVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGKNTFWDVDGSMVPPEWHRWLHCMTD 95
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,621,414,376
Number of Sequences: 462764
Number of Extensions: 39621414376
Number of Successful Extensions: 367225502
Number of sequences better than 0.0: 0
|