BLASTX 7.6.2
Query= RU45116 /QuerySize=269
(268 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6V9I6|HDT1_SOLCH Histone deacetylase HDT1 OS=Solanum chacoen... 55 6e-008
sp|Q8LJS2|HDT1_SOYBN Histone deacetylase HDT1 OS=Glycine max GN=... 50 4e-006
>sp|Q6V9I6|HDT1_SOLCH Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2
SV=1
Length = 269
Score = 55 bits (132), Expect = 6e-008
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +2
Query: 2 DDSDAXXXXXXXXXXXXXXXRAQVSGSVKTPVSAKKAKIVTSTPQKTDGKK-GGHTDTPA 178
D+ D+ R + + KTPV+ KKAK+ +TPQKTDGKK GGH TP
Sbjct: 170 DEDDSDDSEEETPKKAEPAKRRKADSATKTPVTDKKAKL--TTPQKTDGKKGGGHVATPH 227
Query: 179 TDKSKTQTPKSA 214
K ++TPKSA
Sbjct: 228 PSKQASKTPKSA 239
>sp|Q8LJS2|HDT1_SOYBN Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1
Length = 295
Score = 50 bits (117), Expect = 4e-006
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +2
Query: 80 SVKTPVSAKKAKIVTSTPQKTDGKKGGHTDTPATDKSKTQTPKS 211
+ KTP+SAKKAK T+TP+KTDGKK H TP K +TP S
Sbjct: 216 AAKTPISAKKAK--TATPEKTDGKKSVHVATPHPSKKGGKTPNS 257
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,621,414,376
Number of Sequences: 462764
Number of Extensions: 39621414376
Number of Successful Extensions: 367225502
Number of sequences better than 0.0: 0
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