BLASTX 7.6.2
Query= RU51635 /QuerySize=252
(251 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O74856|CAF1_SCHPO Poly(A) ribonuclease pop2 OS=Schizosaccharo... 78 1e-014
sp|Q9UFF9|CNOT8_HUMAN CCR4-NOT transcription complex subunit 8 O... 77 2e-014
sp|Q9D8X5|CNOT8_MOUSE CCR4-NOT transcription complex subunit 8 O... 77 2e-014
sp|P39008|POP2_YEAST Poly(A) ribonuclease POP2 OS=Saccharomyces ... 75 6e-014
sp|Q3ZC01|CNOT7_BOVIN CCR4-NOT transcription complex subunit 7 O... 75 1e-013
sp|Q5ZJV9|CNOT7_CHICK CCR4-NOT transcription complex subunit 7 O... 75 1e-013
sp|Q9UIV1|CNOT7_HUMAN CCR4-NOT transcription complex subunit 7 O... 75 1e-013
sp|Q60809|CNOT7_MOUSE CCR4-NOT transcription complex subunit 7 O... 75 1e-013
sp|Q08BM8|CNOT7_DANRE CCR4-NOT transcription complex subunit 7 O... 72 5e-013
sp|Q3KQ85|CNOT7_XENLA CCR4-NOT transcription complex subunit 7 O... 72 7e-013
sp|A4II96|CNOT7_XENTR CCR4-NOT transcription complex subunit 7 O... 72 7e-013
sp|Q17345|CNOT7_CAEEL CCR4-NOT transcription complex subunit 7 O... 64 2e-010
>sp|O74856|CAF1_SCHPO Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe
GN=caf1 PE=1 SV=1
Length = 332
Score = 78 bits (190), Expect = 1e-014
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
L + GIDF+++++ GI+ FA+L++ SGLV E+VTWITFHS YDF YL+K +TQ LP
Sbjct: 126 LTKSGIDFKKHQEVGIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLKAMTQIPLP 185
Query: 69 EELPGFLR 46
E F +
Sbjct: 186 AEYEEFYK 193
>sp|Q9UFF9|CNOT8_HUMAN CCR4-NOT transcription complex subunit 8 OS=Homo sapiens
GN=CNOT8 PE=1 SV=1
Length = 292
Score = 77 bits (188), Expect = 2e-014
Identities = 32/62 (51%), Positives = 47/62 (75%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
L G+ F+++ + GID+ FA+L+M+SG+V ++V W++FHS YDFGY+VKLLT LP
Sbjct: 116 LANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLP 175
Query: 69 EE 64
EE
Sbjct: 176 EE 177
>sp|Q9D8X5|CNOT8_MOUSE CCR4-NOT transcription complex subunit 8 OS=Mus musculus
GN=Cnot8 PE=2 SV=1
Length = 292
Score = 77 bits (188), Expect = 2e-014
Identities = 32/62 (51%), Positives = 47/62 (75%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
L G+ F+++ + GID+ FA+L+M+SG+V ++V W++FHS YDFGY+VKLLT LP
Sbjct: 116 LANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLP 175
Query: 69 EE 64
EE
Sbjct: 176 EE 177
>sp|P39008|POP2_YEAST Poly(A) ribonuclease POP2 OS=Saccharomyces cerevisiae
GN=POP2 PE=1 SV=2
Length = 433
Score = 75 bits (184), Expect = 6e-014
Identities = 30/66 (45%), Positives = 49/66 (74%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
LR+ GI+FE++ + GID ++F+QL+M SGL+ ++ VTWIT+H+AYD G+L+ +L ++P
Sbjct: 265 LRKSGINFEKHENLGIDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFLINILMNDSMP 324
Query: 69 EELPGF 52
F
Sbjct: 325 NNKEDF 330
>sp|Q3ZC01|CNOT7_BOVIN CCR4-NOT transcription complex subunit 7 OS=Bos taurus
GN=CNOT7 PE=2 SV=1
Length = 285
Score = 75 bits (182), Expect = 1e-013
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
L GI F+++ + GI++ FA+L+M+SG+V E V W++FHS YDFGYL+K+LT LP
Sbjct: 116 LTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175
Query: 69 EE 64
EE
Sbjct: 176 EE 177
>sp|Q5ZJV9|CNOT7_CHICK CCR4-NOT transcription complex subunit 7 OS=Gallus gallus
GN=CNOT7 PE=2 SV=1
Length = 285
Score = 75 bits (182), Expect = 1e-013
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
L GI F+++ + GI++ FA+L+M+SG+V E V W++FHS YDFGYL+K+LT LP
Sbjct: 116 LTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175
Query: 69 EE 64
EE
Sbjct: 176 EE 177
>sp|Q9UIV1|CNOT7_HUMAN CCR4-NOT transcription complex subunit 7 OS=Homo sapiens
GN=CNOT7 PE=1 SV=3
Length = 285
Score = 75 bits (182), Expect = 1e-013
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
L GI F+++ + GI++ FA+L+M+SG+V E V W++FHS YDFGYL+K+LT LP
Sbjct: 116 LTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175
Query: 69 EE 64
EE
Sbjct: 176 EE 177
>sp|Q60809|CNOT7_MOUSE CCR4-NOT transcription complex subunit 7 OS=Mus musculus
GN=Cnot7 PE=1 SV=1
Length = 285
Score = 75 bits (182), Expect = 1e-013
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
L GI F+++ + GI++ FA+L+M+SG+V E V W++FHS YDFGYL+K+LT LP
Sbjct: 116 LTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175
Query: 69 EE 64
EE
Sbjct: 176 EE 177
>sp|Q08BM8|CNOT7_DANRE CCR4-NOT transcription complex subunit 7 OS=Danio rerio
GN=cnot7 PE=2 SV=1
Length = 286
Score = 72 bits (176), Expect = 5e-013
Identities = 30/62 (48%), Positives = 46/62 (74%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
L GI F+++ + GI++ FA+L+M+SG+V E V W++FHS YDFGYL+K+L+ LP
Sbjct: 116 LTSSGIQFKKHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLP 175
Query: 69 EE 64
+E
Sbjct: 176 DE 177
>sp|Q3KQ85|CNOT7_XENLA CCR4-NOT transcription complex subunit 7 OS=Xenopus
laevis GN=cnot7 PE=2 SV=1
Length = 285
Score = 72 bits (175), Expect = 7e-013
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
L GI F+++ + GI++ FA+L M+SG+V E V W++FHS YDFGYL+K+LT LP
Sbjct: 116 LTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175
Query: 69 E 67
E
Sbjct: 176 E 176
>sp|A4II96|CNOT7_XENTR CCR4-NOT transcription complex subunit 7 OS=Xenopus
tropicalis GN=cnot7 PE=2 SV=1
Length = 285
Score = 72 bits (175), Expect = 7e-013
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
L GI F+++ + GI++ FA+L M+SG+V E V W++FHS YDFGYL+K+LT LP
Sbjct: 116 LTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLP 175
Query: 69 E 67
E
Sbjct: 176 E 176
>sp|Q17345|CNOT7_CAEEL CCR4-NOT transcription complex subunit 7
OS=Caenorhabditis elegans GN=ccf-1 PE=2 SV=1
Length = 310
Score = 64 bits (154), Expect = 2e-010
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = -3
Query: 249 LRRQGIDFERNRDRGIDSYKFAQLMMSSGLVCNEDVTWITFHSAYDFGYLVKLLTQQALP 70
LR+ GIDF ++ GI + F +L+ +SGL+ + +TW+TF S YDFGYL+K +T LP
Sbjct: 127 LRQAGIDFTLLQNNGIPTAVFGELLTTSGLITDPRITWLTFSSGYDFGYLLKSITLGDLP 186
Query: 69 EE 64
+E
Sbjct: 187 KE 188
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,561,515,216
Number of Sequences: 462764
Number of Extensions: 42561515216
Number of Successful Extensions: 398959678
Number of sequences better than 0.0: 0
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