BLASTX 7.6.2
Query= RU52455 /QuerySize=256
(255 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein M... 53 4e-007
sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5... 52 1e-006
sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3... 51 1e-006
sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysi... 51 1e-006
sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysi... 51 1e-006
sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4... 51 2e-006
sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4... 51 2e-006
sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing prot... 50 3e-006
sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3... 49 8e-006
sp|Q9VMJ7|JAD1_DROME Histone demethylase lid OS=Drosophila melan... 49 8e-006
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 53 bits (125), Expect = 4e-007
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -2
Query: 254 LCCDGCPSAYHTRCIGVMKLSIPEGSWYCPECT 156
LCCD CPSAYHT C+ +IP+G W CP C+
Sbjct: 450 LCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 482
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo
sapiens GN=CHD5 PE=2 SV=1
Length = 1954
Score = 52 bits (122), Expect = 1e-006
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -2
Query: 254 LCCDGCPSAYHTRCIGVMKLSIPEGSWYCPECT 156
LCCD CPS+YH C+ IP G W CP CT
Sbjct: 429 LCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 51 bits (121), Expect = 1e-006
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -2
Query: 254 LCCDGCPSAYHTRCIGVMKLSIPEGSWYCPEC 159
LCCD CPS YH C+ SIP+G W CP C
Sbjct: 48 LCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4
lysine-20 specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 51 bits (121), Expect = 1e-006
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = -2
Query: 254 LCCDGCPSAYHTRCIGVMKLSIPEGSWYCPECTINK 147
LCCD CP+A+H C+ + IPEG+WYC +C K
Sbjct: 1720 LCCDSCPAAFHRECLNI---DIPEGNWYCNDCKAGK 1752
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4
lysine-20 specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 51 bits (121), Expect = 1e-006
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = -2
Query: 254 LCCDGCPSAYHTRCIGVMKLSIPEGSWYCPECTINK 147
LCCD CP+A+H C+ + IPEG+WYC +C K
Sbjct: 1618 LCCDSCPAAFHRECLNI---DIPEGNWYCNDCKAGK 1650
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo
sapiens GN=CHD4 PE=1 SV=1
Length = 1912
Score = 51 bits (120), Expect = 2e-006
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -2
Query: 254 LCCDGCPSAYHTRCIGVMKLSIPEGSWYCPECT 156
LCCD CPS+YH C+ IP G W CP CT
Sbjct: 462 LCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus
musculus GN=Chd4 PE=1 SV=1
Length = 1915
Score = 51 bits (120), Expect = 2e-006
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -2
Query: 254 LCCDGCPSAYHTRCIGVMKLSIPEGSWYCPECT 156
LCCD CPS+YH C+ IP G W CP CT
Sbjct: 455 LCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus
musculus GN=Phrf1 PE=2 SV=2
Length = 1682
Score = 50 bits (118), Expect = 3e-006
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -2
Query: 254 LCCDGCPSAYHTRCIGVMKLSIPEGSWYCPECTINKIGPT 135
L CDGC + YH C+ +P W+CPECT+ + PT
Sbjct: 201 LLCDGCDAGYHMECLDPPLQEVPVDEWFCPECTVPGVDPT 240
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 49 bits (114), Expect = 8e-006
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -2
Query: 254 LCCDGCPSAYHTRCIGVMKLSIPEGSWYCPECTI 153
L CD CPS+YH CI IPEG W CP C I
Sbjct: 341 LLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCII 374
>sp|Q9VMJ7|JAD1_DROME Histone demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 49 bits (114), Expect = 8e-006
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -2
Query: 254 LCCDGCPSAYHTRCIGVMKLSIPEGSWYCPECTINKI 144
L CDGC +YHT C+ SIP+G W CP C + ++
Sbjct: 464 LLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEV 500
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,561,515,216
Number of Sequences: 462764
Number of Extensions: 42561515216
Number of Successful Extensions: 398959678
Number of sequences better than 0.0: 0
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