BLASTX 7.6.2
Query= RU56481 /QuerySize=243
(242 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8LD27|PSB6_ARATH Proteasome subunit beta type-6 OS=Arabidops... 95 8e-020
sp|P93395|PSB6_TOBAC Proteasome subunit beta type-6 OS=Nicotiana... 90 3e-018
sp|P28073|PSB6_RAT Proteasome subunit beta type-6 OS=Rattus norv... 60 2e-009
sp|Q3MHN0|PSB6_BOVIN Proteasome subunit beta type-6 OS=Bos tauru... 60 3e-009
sp|P28072|PSB6_HUMAN Proteasome subunit beta type-6 OS=Homo sapi... 60 4e-009
sp|Q60692|PSB6_MOUSE Proteasome subunit beta type-6 OS=Mus muscu... 59 8e-009
sp|O43063|PSB6_SCHPO Probable proteasome subunit beta type-6 OS=... 59 8e-009
sp|P38624|PSB6_YEAST Proteasome component PRE3 OS=Saccharomyces ... 57 2e-008
sp|Q55GJ6|PSB6_DICDI Proteasome subunit beta type-6 OS=Dictyoste... 56 4e-008
sp|Q54QR2|PSB7_DICDI Proteasome subunit beta type-7 OS=Dictyoste... 51 1e-006
sp|Q9PT26|PSB9_ONCMY Proteasome subunit beta type-9 OS=Oncorhync... 49 6e-006
sp|Q9DD33|PSB9_SALSA Proteasome subunit beta type-9 OS=Salmo sal... 49 6e-006
>sp|Q8LD27|PSB6_ARATH Proteasome subunit beta type-6 OS=Arabidopsis thaliana
GN=PBA1 PE=1 SV=2
Length = 233
Score = 95 bits (235), Expect = 8e-020
Identities = 45/51 (88%), Positives = 49/51 (96%)
Frame = +3
Query: 81 DMNLNAPHSMGTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQLTDN 233
D+NL+APHSMGTTIIGVTY+GGVVLGADSR STG+YVANR SDKITQLTDN
Sbjct: 2 DLNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDN 52
>sp|P93395|PSB6_TOBAC Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2
SV=1
Length = 234
Score = 90 bits (221), Expect = 3e-018
Identities = 42/53 (79%), Positives = 49/53 (92%)
Frame = +3
Query: 75 MDDMNLNAPHSMGTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQLTDN 233
M++ +++ PHSMGTTIIGVTY+GGVVLGADSR STG+YVANR SDKITQLTDN
Sbjct: 1 MENTDVDQPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDN 53
>sp|P28073|PSB6_RAT Proteasome subunit beta type-6 OS=Rattus norvegicus GN=Psmb6
PE=1 SV=3
Length = 238
Score = 60 bits (145), Expect = 2e-009
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = +3
Query: 93 NAPHSMGTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQLTDN 233
N S GTTI+ V +DGGVVLGADSR +TG Y+ANR +DK+T + D+
Sbjct: 27 NREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDH 73
>sp|Q3MHN0|PSB6_BOVIN Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1
SV=1
Length = 239
Score = 60 bits (144), Expect = 3e-009
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +3
Query: 93 NAPHSMGTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQLTD 230
N S GTTI+ V +DGGVVLGADSR +TG Y+ANR +DK+T + D
Sbjct: 28 NREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHD 73
>sp|P28072|PSB6_HUMAN Proteasome subunit beta type-6 OS=Homo sapiens GN=PSMB6
PE=1 SV=4
Length = 239
Score = 60 bits (143), Expect = 4e-009
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3
Query: 105 SMGTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQLTD 230
S GTTI+ V +DGGVVLGADSR +TG Y+ANR +DK+T + D
Sbjct: 32 STGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHD 73
>sp|Q60692|PSB6_MOUSE Proteasome subunit beta type-6 OS=Mus musculus GN=Psmb6
PE=1 SV=3
Length = 238
Score = 59 bits (140), Expect = 8e-009
Identities = 27/47 (57%), Positives = 36/47 (76%)
Frame = +3
Query: 93 NAPHSMGTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQLTDN 233
N S GTTI+ V ++GGVVLGADSR +TG Y+ANR +DK+T + D+
Sbjct: 27 NREVSTGTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDH 73
>sp|O43063|PSB6_SCHPO Probable proteasome subunit beta type-6
OS=Schizosaccharomyces pombe GN=SPBC4C3.10c PE=2 SV=1
Length = 226
Score = 59 bits (140), Expect = 8e-009
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +3
Query: 108 MGTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQLTDN 233
MGTTI + Y GV+L ADSR + G Y+ANR +DK+TQLTDN
Sbjct: 23 MGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDN 64
>sp|P38624|PSB6_YEAST Proteasome component PRE3 OS=Saccharomyces cerevisiae
GN=PRE3 PE=1 SV=2
Length = 215
Score = 57 bits (136), Expect = 2e-008
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +3
Query: 105 SMGTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQLTD 230
S+GT+I+ VT+ GV+LGADSR +TG Y+ANR +DK+T++ D
Sbjct: 17 SLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHD 58
>sp|Q55GJ6|PSB6_DICDI Proteasome subunit beta type-6 OS=Dictyostelium discoideum
GN=psmB6 PE=1 SV=1
Length = 214
Score = 56 bits (134), Expect = 4e-008
Identities = 23/39 (58%), Positives = 33/39 (84%)
Frame = +3
Query: 108 MGTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQL 224
+GT+I+ V YDGGV++GADSR +TG Y+ANR ++KIT +
Sbjct: 13 LGTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPI 51
>sp|Q54QR2|PSB7_DICDI Proteasome subunit beta type-7 OS=Dictyostelium discoideum
GN=psmB7 PE=3 SV=1
Length = 266
Score = 51 bits (121), Expect = 1e-006
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 111 GTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQLTDN 233
GTTI+GV Y GGVVLGAD+RA+ G VA++ +KI + DN
Sbjct: 34 GTTIVGVVYKGGVVLGADTRATEGPIVADKNCEKIHYIADN 74
>sp|Q9PT26|PSB9_ONCMY Proteasome subunit beta type-9 OS=Oncorhynchus mykiss
GN=psmb9 PE=2 SV=1
Length = 217
Score = 49 bits (115), Expect = 6e-006
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 111 GTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQLTD 230
GTTII + +DGGVVLG+DSR S G V NR +K++ L D
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD 57
>sp|Q9DD33|PSB9_SALSA Proteasome subunit beta type-9 OS=Salmo salar GN=psmb9-a
PE=2 SV=1
Length = 217
Score = 49 bits (115), Expect = 6e-006
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 111 GTTIIGVTYDGGVVLGADSRASTGVYVANRCSDKITQLTD 230
GTTII + +DGGVVLG+DSR S G V NR +K++ L D
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD 57
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,470,057,025
Number of Sequences: 462764
Number of Extensions: 44470057025
Number of Successful Extensions: 408778528
Number of sequences better than 0.0: 0
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