BLASTX 7.6.2
Query= RU02201 /QuerySize=944
(943 letters)
Database: UniProt/TrEMBL;
7,695,149 sequences; 2,506,224,640 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|B9HSP8|B9HSP8_POPTR High mobility group family OS=Populus tri... 82 7e-014
tr|A5BN89|A5BN89_VITVI Putative uncharacterized protein OS=Vitis... 80 2e-013
tr|B9SLN3|B9SLN3_RICCO DNA-binding protein MNB1B, putative OS=Ri... 79 3e-013
tr|B9SQ35|B9SQ35_RICCO DNA-binding protein MNB1B, putative OS=Ri... 78 8e-013
tr|A5BH86|A5BH86_VITVI Putative uncharacterized protein OS=Vitis... 77 2e-012
tr|A9PD85|A9PD85_POPTR Putative uncharacterized protein OS=Popul... 76 3e-012
tr|B9HHN1|B9HHN1_POPTR High mobility group family OS=Populus tri... 76 3e-012
tr|Q1EMR5|Q1EMR5_PLAMJ HMG-protein (Fragment) OS=Plantago major ... 75 9e-012
tr|O49595|O49595_ARATH At3g51880/ORF13 OS=Arabidopsis thaliana G... 70 2e-010
tr|Q3EAL6|Q3EAL6_ARATH AT3G51880 protein OS=Arabidopsis thaliana... 70 2e-010
tr|A9NK65|A9NK65_PICSI Putative uncharacterized protein OS=Picea... 69 4e-010
tr|B4UW92|B4UW92_ARAHY High mobility group protein 1 OS=Arachis ... 57 2e-006
tr|A8MQS4|A8MQS4_ARATH Uncharacterized protein At1g20696.3 OS=Ar... 56 4e-006
tr|P93047|P93047_ARATH At1g20690/F2D10_15 OS=Arabidopsis thalian... 56 4e-006
tr|Q2L6T4|Q2L6T4_ARATH Uncharacterized protein At1g20696.2 OS=Ar... 56 4e-006
tr|Q9LM85|Q9LM85_ARATH F2D10.18 OS=Arabidopsis thaliana PE=4 SV=1 56 4e-006
tr|O04692|O04692_TOBAC DNA-binding protein OS=Nicotiana tabacum ... 55 5e-006
>tr|B9HSP8|B9HSP8_POPTR High mobility group family OS=Populus trichocarpa
GN=HMGB910 PE=4 SV=1
Length = 176
Score = 82 bits (200), Expect = 7e-014
Identities = 44/109 (40%), Positives = 51/109 (46%)
Frame = +2
Query: 254 PVDDRKVGKRKAVAEVNKSSGKLXXXXXXXXXXXXXXXXXXXXFFVFLEEFRITYKQEHP 433
PV+DRK+GKRKA + N+SS K FFVFLEEFR YKQEHP
Sbjct: 20 PVEDRKIGKRKAALKANESSKKRVKKEKITKKDPNKPKRPPSAFFVFLEEFRKVYKQEHP 79
Query: 434 NXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMNAYNTKQ 580
N WKS+S ++YEKLM AYN KQ
Sbjct: 80 NVKAVSAVGKAGGEKWKSLSAAEKAPYEAKAAKRKSDYEKLMTAYNKKQ 128
>tr|A5BN89|A5BN89_VITVI Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_023376 PE=4 SV=1
Length = 166
Score = 80 bits (197), Expect = 2e-013
Identities = 45/127 (35%), Positives = 56/127 (44%)
Frame = +2
Query: 254 PVDDRKVGKRKAVAEVNKSSGKLXXXXXXXXXXXXXXXXXXXXFFVFLEEFRITYKQEHP 433
PV+DR++GKRKA + +KS+ KL FFVFLEEFR YKQEHP
Sbjct: 20 PVEDRRLGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHP 79
Query: 434 NXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMNAYNTKQXXXXXXXXXXX 613
N WKS+S ++YEKLM AYN KQ
Sbjct: 80 NVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEKLMAAYNKKQESMADDDEEES 139
Query: 614 XKPKASV 634
+ K+ V
Sbjct: 140 DRSKSEV 146
>tr|B9SLN3|B9SLN3_RICCO DNA-binding protein MNB1B, putative OS=Ricinus communis
GN=RCOM_0593200 PE=4 SV=1
Length = 190
Score = 79 bits (194), Expect = 3e-013
Identities = 43/109 (39%), Positives = 51/109 (46%)
Frame = +2
Query: 254 PVDDRKVGKRKAVAEVNKSSGKLXXXXXXXXXXXXXXXXXXXXFFVFLEEFRITYKQEHP 433
PV+DRK+GKR A + NK+S K+ FFVFLE+FR YKQEHP
Sbjct: 20 PVEDRKLGKRSAALKPNKNSKKVTKKDKPAKKDPNRPKRPPSAFFVFLEDFRKVYKQEHP 79
Query: 434 NXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMNAYNTKQ 580
N WKSMS ++YEKLM AYN KQ
Sbjct: 80 NVKAVSAVGKAGGEKWKSMSNAEKSPFEAKAAKRKSDYEKLMTAYNKKQ 128
>tr|B9SQ35|B9SQ35_RICCO DNA-binding protein MNB1B, putative OS=Ricinus communis
GN=RCOM_0644150 PE=4 SV=1
Length = 171
Score = 78 bits (191), Expect = 8e-013
Identities = 46/127 (36%), Positives = 54/127 (42%)
Frame = +2
Query: 254 PVDDRKVGKRKAVAEVNKSSGKLXXXXXXXXXXXXXXXXXXXXFFVFLEEFRITYKQEHP 433
P DDRKVGKRKA A V++SS FFVFLEEFR T+K+E+P
Sbjct: 19 PADDRKVGKRKAAAAVDRSSKLKAKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENP 78
Query: 434 NXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMNAYNTKQXXXXXXXXXXX 613
+ WKSMS EY KLMNAYN KQ
Sbjct: 79 SVTSVAAVGKAGGAKWKSMSSAEKAPYEAKAAKKKDEYGKLMNAYNKKQESTADDGEEES 138
Query: 614 XKPKASV 634
+ K+ V
Sbjct: 139 DRSKSEV 145
>tr|A5BH86|A5BH86_VITVI Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_023651 PE=4 SV=1
Length = 168
Score = 77 bits (188), Expect = 2e-012
Identities = 42/127 (33%), Positives = 53/127 (41%)
Frame = +2
Query: 254 PVDDRKVGKRKAVAEVNKSSGKLXXXXXXXXXXXXXXXXXXXXFFVFLEEFRITYKQEHP 433
P +DRK+GKRKA + KSS + FFVFLEEFR +K+E+P
Sbjct: 20 PAEDRKIGKRKAAVKAEKSSKRATTKDKKAKKDPNKPKRPPSAFFVFLEEFRKVFKKENP 79
Query: 434 NXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMNAYNTKQXXXXXXXXXXX 613
N WKS+S EYEK+MNAYN KQ
Sbjct: 80 NVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEKIMNAYNKKQESTADDGDEES 139
Query: 614 XKPKASV 634
+ K+ V
Sbjct: 140 DRSKSEV 146
>tr|A9PD85|A9PD85_POPTR Putative uncharacterized protein OS=Populus trichocarpa
PE=2 SV=1
Length = 171
Score = 76 bits (186), Expect = 3e-012
Identities = 42/109 (38%), Positives = 49/109 (44%)
Frame = +2
Query: 254 PVDDRKVGKRKAVAEVNKSSGKLXXXXXXXXXXXXXXXXXXXXFFVFLEEFRITYKQEHP 433
PV+DRK+GKRKA + +SS K FFVFLEEFR YKQEHP
Sbjct: 20 PVEDRKIGKRKAALKATESSKKRAAKEKITKKDPDKPKRPPSSFFVFLEEFRKIYKQEHP 79
Query: 434 NXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMNAYNTKQ 580
N WKSMS ++Y KLM AY+ KQ
Sbjct: 80 NMKAVSAVGKAGGEKWKSMSAAEKAPYEAKAAIKKSDYGKLMTAYSKKQ 128
>tr|B9HHN1|B9HHN1_POPTR High mobility group family OS=Populus trichocarpa
GN=HMGB911 PE=4 SV=1
Length = 179
Score = 76 bits (186), Expect = 3e-012
Identities = 42/109 (38%), Positives = 49/109 (44%)
Frame = +2
Query: 254 PVDDRKVGKRKAVAEVNKSSGKLXXXXXXXXXXXXXXXXXXXXFFVFLEEFRITYKQEHP 433
PV+DRK+GKRKA + +SS K FFVFLEEFR YKQEHP
Sbjct: 20 PVEDRKIGKRKAALKATESSKKRAAKEKITKKDPDKPKRPPSSFFVFLEEFRKIYKQEHP 79
Query: 434 NXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMNAYNTKQ 580
N WKSMS ++Y KLM AY+ KQ
Sbjct: 80 NMKAVSAVGKAGGEKWKSMSAAEKAPYEAKAAIKKSDYGKLMTAYSKKQ 128
>tr|Q1EMR5|Q1EMR5_PLAMJ HMG-protein (Fragment) OS=Plantago major GN=hmg1 PE=2
SV=1
Length = 212
Score = 75 bits (182), Expect = 9e-012
Identities = 47/129 (36%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Frame = +2
Query: 254 PVDDRKVGKRKAVA--EVNKSSGKLXXXXXXXXXXXXXXXXXXXXFFVFLEEFRITYKQE 427
PVDDRKVGKRKA A +V K + K FFVFLEEFR T+K+E
Sbjct: 64 PVDDRKVGKRKAAAAPKVKKPAAK---KDKKAKKDPNKPKRPPSAFFVFLEEFRQTFKKE 120
Query: 428 HPNXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMNAYNTKQXXXXXXXXX 607
+PN WKS++ +EYEKLMNAYN KQ
Sbjct: 121 NPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEYEKLMNAYNKKQESSADEADE 180
Query: 608 XXXKPKASV 634
K ++ V
Sbjct: 181 GSEKSRSEV 189
>tr|O49595|O49595_ARATH At3g51880/ORF13 OS=Arabidopsis thaliana GN=HMGalpha PE=1
SV=1
Length = 178
Score = 70 bits (170), Expect = 2e-010
Identities = 41/106 (38%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 254 PVDDRKVGKRKAVAEVNKSSGKLXXXXXXXXXXXXXXXXXXXXFFVFLEEFRITYKQEHP 433
PVDDRKVGKRKA AE K + + FFVFLE+FR+T+K+E+P
Sbjct: 19 PVDDRKVGKRKAPAE--KPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENP 76
Query: 434 NXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMNAYN 571
N WKSMS EYEK M+AYN
Sbjct: 77 NVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYN 122
>tr|Q3EAL6|Q3EAL6_ARATH AT3G51880 protein OS=Arabidopsis thaliana GN=AT3G51880
PE=2 SV=1
Length = 185
Score = 70 bits (170), Expect = 2e-010
Identities = 41/106 (38%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 254 PVDDRKVGKRKAVAEVNKSSGKLXXXXXXXXXXXXXXXXXXXXFFVFLEEFRITYKQEHP 433
PVDDRKVGKRKA AE K + + FFVFLE+FR+T+K+E+P
Sbjct: 19 PVDDRKVGKRKAPAE--KPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENP 76
Query: 434 NXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMNAYN 571
N WKSMS EYEK M+AYN
Sbjct: 77 NVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYN 122
>tr|A9NK65|A9NK65_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 157
Score = 69 bits (168), Expect = 4e-010
Identities = 39/126 (30%), Positives = 52/126 (41%)
Frame = +2
Query: 257 VDDRKVGKRKAVAEVNKSSGKLXXXXXXXXXXXXXXXXXXXXFFVFLEEFRITYKQEHPN 436
V+++ +GKRK A+ +K S + FFVF+E+FR TYK+++PN
Sbjct: 17 VEEKPIGKRKTAAKESKVSSRQEKKGRKAAKDPNKPKRPASAFFVFMEDFRKTYKEKNPN 76
Query: 437 XXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMNAYNTKQXXXXXXXXXXXX 616
WKSMS TEYEK M AYN KQ
Sbjct: 77 VKSVSVVGKAGGDKWKSMSEADKAPYVAKAGKRKTEYEKNMAAYNNKQTSTAGDSAEESD 136
Query: 617 KPKASV 634
K K+ V
Sbjct: 137 KSKSEV 142
>tr|B4UW92|B4UW92_ARAHY High mobility group protein 1 OS=Arachis hypogaea PE=2
SV=1
Length = 139
Score = 57 bits (135), Expect = 2e-006
Identities = 30/84 (35%), Positives = 34/84 (40%)
Frame = +2
Query: 383 FFVFLEEFRITYKQEHPNXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMN 562
FFVF+ EFR YK+EHPN WKSMS EYE+ M
Sbjct: 43 FFVFMSEFREQYKKEHPNNKSVAVVGKAGGDRWKSMSDADKAPYQAKAEKKKEEYERTMQ 102
Query: 563 AYNTKQXXXXXXXXXXXXKPKASV 634
AYN KQ K K+ V
Sbjct: 103 AYNKKQESKGASEEDESDKSKSEV 126
>tr|A8MQS4|A8MQS4_ARATH Uncharacterized protein At1g20696.3 OS=Arabidopsis
thaliana GN=At1g20696 PE=4 SV=1
Length = 140
Score = 56 bits (133), Expect = 4e-006
Identities = 26/65 (40%), Positives = 31/65 (47%)
Frame = +2
Query: 383 FFVFLEEFRITYKQEHPNXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMN 562
FFVF+E+FR+TYK+EHP WKS+S EYEK M
Sbjct: 42 FFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMK 101
Query: 563 AYNTK 577
AYN K
Sbjct: 102 AYNKK 106
>tr|P93047|P93047_ARATH At1g20690/F2D10_15 OS=Arabidopsis thaliana GN=HMG1 PE=2
SV=1
Length = 141
Score = 56 bits (133), Expect = 4e-006
Identities = 26/65 (40%), Positives = 31/65 (47%)
Frame = +2
Query: 383 FFVFLEEFRITYKQEHPNXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMN 562
FFVF+E+FR+TYK+EHP WKS+S EYEK M
Sbjct: 42 FFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMK 101
Query: 563 AYNTK 577
AYN K
Sbjct: 102 AYNKK 106
>tr|Q2L6T4|Q2L6T4_ARATH Uncharacterized protein At1g20696.2 OS=Arabidopsis
thaliana GN=At1g20696 PE=4 SV=1
Length = 147
Score = 56 bits (133), Expect = 4e-006
Identities = 26/65 (40%), Positives = 31/65 (47%)
Frame = +2
Query: 383 FFVFLEEFRITYKQEHPNXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMN 562
FFVF+E+FR+TYK+EHP WKS+S EYEK M
Sbjct: 42 FFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMK 101
Query: 563 AYNTK 577
AYN K
Sbjct: 102 AYNKK 106
>tr|Q9LM85|Q9LM85_ARATH F2D10.18 OS=Arabidopsis thaliana PE=4 SV=1
Length = 662
Score = 56 bits (133), Expect = 4e-006
Identities = 26/65 (40%), Positives = 31/65 (47%)
Frame = +2
Query: 383 FFVFLEEFRITYKQEHPNXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMN 562
FFVF+E+FR+TYK+EHP WKS+S EYEK M
Sbjct: 563 FFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMK 622
Query: 563 AYNTK 577
AYN K
Sbjct: 623 AYNKK 627
>tr|O04692|O04692_TOBAC DNA-binding protein OS=Nicotiana tabacum GN=T231 PE=2
SV=1
Length = 142
Score = 55 bits (132), Expect = 5e-006
Identities = 26/66 (39%), Positives = 32/66 (48%)
Frame = +2
Query: 383 FFVFLEEFRITYKQEHPNXXXXXXXXXXXXXXWKSMSXXXXXXXXXXXXXXXTEYEKLMN 562
FFVF+EEFR TYK++HPN WK +S EY+K M+
Sbjct: 43 FFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAEKRKAEYQKNMD 102
Query: 563 AYNTKQ 580
AYN KQ
Sbjct: 103 AYNRKQ 108
Database: UniProt/TrEMBL
Posted date: Sun May 10 14:41:50 2009
Number of letters in database: 2,506,224,640
Number of sequences in database: 7,695,149
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,139,566,550
Number of Sequences: 7695149
Number of Extensions: 51139566550
Number of Successful Extensions: 45113940
Number of sequences better than 0.0: 0
|