BLASTX 7.6.2
Query= RU04514 /QuerySize=356
(355 letters)
Database: UniProt/TrEMBL;
7,695,149 sequences; 2,506,224,640 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q1EMR5|Q1EMR5_PLAMJ HMG-protein (Fragment) OS=Plantago major ... 65 8e-010
tr|A5BH86|A5BH86_VITVI Putative uncharacterized protein OS=Vitis... 65 1e-009
tr|Q8VWT1|Q8VWT1_NARPS HMG-domain containing protein (Fragment) ... 65 1e-009
tr|A9NY59|A9NY59_PICSI Putative uncharacterized protein OS=Picea... 65 1e-009
tr|B9SQ35|B9SQ35_RICCO DNA-binding protein MNB1B, putative OS=Ri... 64 2e-009
tr|A9NN63|A9NN63_PICSI Putative uncharacterized protein OS=Picea... 63 4e-009
tr|A2Z3U6|A2Z3U6_ORYSI Putative uncharacterized protein OS=Oryza... 62 9e-009
tr|B9G4Y2|B9G4Y2_ORYSJ Putative uncharacterized protein OS=Oryza... 62 9e-009
tr|O49595|O49595_ARATH At3g51880/ORF13 OS=Arabidopsis thaliana G... 62 9e-009
tr|Q3EAL6|Q3EAL6_ARATH AT3G51880 protein OS=Arabidopsis thaliana... 62 9e-009
tr|Q69MM2|Q69MM2_ORYSJ Os09g0551600 protein OS=Oryza sativa subs... 62 9e-009
tr|Q0KIW3|Q0KIW3_WHEAT High mobility globular protein OS=Triticu... 62 1e-008
tr|Q43481|Q43481_HORVU HMG1/2-like protein OS=Hordeum vulgare PE... 62 1e-008
tr|Q676W2|Q676W2_HYAOR HMG transcription factor (Fragment) OS=Hy... 61 2e-008
tr|B7FN80|B7FN80_MEDTR Putative uncharacterized protein OS=Medic... 61 2e-008
tr|O04418|O04418_MAIZE Putative uncharacterized protein OS=Zea m... 61 2e-008
tr|Q8W512|Q8W512_MAIZE HMG-like nucleosome/chromatin assembly fa... 61 2e-008
tr|A5BN89|A5BN89_VITVI Putative uncharacterized protein OS=Vitis... 60 3e-008
tr|A7Q3F5|A7Q3F5_VITVI Chromosome chr13 scaffold_48, whole genom... 60 3e-008
tr|B4UW92|B4UW92_ARAHY High mobility group protein 1 OS=Arachis ... 60 4e-008
tr|P93704|P93704_CANGL HMG-1 OS=Canavalia gladiata PE=2 SV=1 60 4e-008
tr|O04692|O04692_TOBAC DNA-binding protein OS=Nicotiana tabacum ... 60 5e-008
tr|A9NK65|A9NK65_PICSI Putative uncharacterized protein OS=Picea... 59 6e-008
tr|A9Q9L0|A9Q9L0_PHYPA High mobility group protein B3 OS=Physcom... 59 6e-008
tr|O49948|O49948_SOLTU High mobility group protein OS=Solanum tu... 59 8e-008
tr|B9HSP8|B9HSP8_POPTR High mobility group family OS=Populus tri... 59 1e-007
tr|B9DG70|B9DG70_ARATH AT2G17560 protein OS=Arabidopsis thaliana... 58 1e-007
tr|O49598|O49598_ARATH HMG protein OS=Arabidopsis thaliana GN=HM... 58 1e-007
tr|Q42344|Q42344_ARATH HMG1-like protein OS=Arabidopsis thaliana... 58 1e-007
tr|Q5NKN3|Q5NKN3_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=... 58 1e-007
>tr|Q1EMR5|Q1EMR5_PLAMJ HMG-protein (Fragment) OS=Plantago major GN=hmg1 PE=2
SV=1
Length = 212
Score = 65 bits (158), Expect = 8e-010
Identities = 27/35 (77%), Positives = 33/35 (94%)
Frame = +3
Query: 249 RRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
++AKKDPNKPKRPPSAFFVFL +FR+ FKK+NPN+
Sbjct: 90 KKAKKDPNKPKRPPSAFFVFLEEFRQTFKKENPNI 124
>tr|A5BH86|A5BH86_VITVI Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_023651 PE=4 SV=1
Length = 168
Score = 65 bits (157), Expect = 1e-009
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +3
Query: 249 RRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
++AKKDPNKPKRPPSAFFVFL +FR+ FKK+NPNV
Sbjct: 47 KKAKKDPNKPKRPPSAFFVFLEEFRKVFKKENPNV 81
>tr|Q8VWT1|Q8VWT1_NARPS HMG-domain containing protein (Fragment) OS=Narcissus
pseudonarcissus PE=2 SV=1
Length = 106
Score = 65 bits (157), Expect = 1e-009
Identities = 29/49 (59%), Positives = 40/49 (81%), Gaps = 6/49 (12%)
Frame = +3
Query: 222 RVAKERPSRR------RAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPN 350
R A E+P+++ +A+KDPNKPKRPPSAFFVF+ +FR++FK+KNPN
Sbjct: 22 RKAAEKPAKKPVVKKSKAEKDPNKPKRPPSAFFVFMEEFRKQFKEKNPN 70
>tr|A9NY59|A9NY59_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 151
Score = 65 bits (156), Expect = 1e-009
Identities = 27/43 (62%), Positives = 36/43 (83%)
Frame = +3
Query: 222 RVAKERPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPN 350
+V ++ ++AKKDPNKPKRPPSAFFVFL +FR+E+K+ NPN
Sbjct: 28 QVKRQIKKEKKAKKDPNKPKRPPSAFFVFLDEFRKEYKQANPN 70
>tr|B9SQ35|B9SQ35_RICCO DNA-binding protein MNB1B, putative OS=Ricinus communis
GN=RCOM_0644150 PE=4 SV=1
Length = 171
Score = 64 bits (154), Expect = 2e-009
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +3
Query: 195 ERXXXXXXIRVAKERPSR-RRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
+R R +K + R ++AKKDPNKPKRPPSAFFVFL +FR+ FKK+NP+V
Sbjct: 27 KRKAAAAVDRSSKLKAKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPSV 80
>tr|A9NN63|A9NN63_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 154
Score = 63 bits (152), Expect = 4e-009
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
Frame = +3
Query: 192 NERXXXXXXIRVAKERPSRRRAK----KDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
N+ + AKE+P++R+AK KDPN+PKRPP+AFFV+L +FR+ FK+K+P+V
Sbjct: 16 NKNAEAKKKLLSAKEKPNKRQAKPKAVKDPNQPKRPPTAFFVYLEEFRKTFKQKHPDV 73
>tr|A2Z3U6|A2Z3U6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_32309 PE=4 SV=1
Length = 139
Score = 62 bits (149), Expect = 9e-009
Identities = 25/36 (69%), Positives = 34/36 (94%)
Frame = +3
Query: 246 RRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
+ +A+KDPNKPKRPPSAFFVF+ QFR+++K+K+PNV
Sbjct: 18 KTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNV 53
>tr|B9G4Y2|B9G4Y2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_30257 PE=4 SV=1
Length = 139
Score = 62 bits (149), Expect = 9e-009
Identities = 25/36 (69%), Positives = 34/36 (94%)
Frame = +3
Query: 246 RRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
+ +A+KDPNKPKRPPSAFFVF+ QFR+++K+K+PNV
Sbjct: 18 KTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNV 53
>tr|O49595|O49595_ARATH At3g51880/ORF13 OS=Arabidopsis thaliana GN=HMGalpha PE=1
SV=1
Length = 178
Score = 62 bits (149), Expect = 9e-009
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = +3
Query: 231 KERPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
+E ++AKKDPNKPKR PSAFFVFL FR FKK+NPNV
Sbjct: 38 RETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNV 78
>tr|Q3EAL6|Q3EAL6_ARATH AT3G51880 protein OS=Arabidopsis thaliana GN=AT3G51880
PE=2 SV=1
Length = 185
Score = 62 bits (149), Expect = 9e-009
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = +3
Query: 231 KERPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
+E ++AKKDPNKPKR PSAFFVFL FR FKK+NPNV
Sbjct: 38 RETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNV 78
>tr|Q69MM2|Q69MM2_ORYSJ Os09g0551600 protein OS=Oryza sativa subsp. japonica
GN=P0489D11.30 PE=2 SV=1
Length = 127
Score = 62 bits (149), Expect = 9e-009
Identities = 25/36 (69%), Positives = 34/36 (94%)
Frame = +3
Query: 246 RRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
+ +A+KDPNKPKRPPSAFFVF+ QFR+++K+K+PNV
Sbjct: 18 KTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNV 53
>tr|Q0KIW3|Q0KIW3_WHEAT High mobility globular protein OS=Triticum aestivum
GN=HMGB1 PE=2 SV=1
Length = 161
Score = 62 bits (148), Expect = 1e-008
Identities = 28/42 (66%), Positives = 35/42 (83%), Gaps = 4/42 (9%)
Frame = +3
Query: 234 ERPSRR----RAKKDPNKPKRPPSAFFVFLGQFREEFKKKNP 347
E+P+ + +A KDPNKPKR PSAFFVF+G+FREEFK+KNP
Sbjct: 24 EKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNP 65
>tr|Q43481|Q43481_HORVU HMG1/2-like protein OS=Hordeum vulgare PE=2 SV=1
Length = 160
Score = 62 bits (148), Expect = 1e-008
Identities = 28/42 (66%), Positives = 35/42 (83%), Gaps = 4/42 (9%)
Frame = +3
Query: 234 ERPSRR----RAKKDPNKPKRPPSAFFVFLGQFREEFKKKNP 347
E+P+ + +A KDPNKPKR PSAFFVF+G+FREEFK+KNP
Sbjct: 24 EKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNP 65
>tr|Q676W2|Q676W2_HYAOR HMG transcription factor (Fragment) OS=Hyacinthus
orientalis PE=2 SV=1
Length = 158
Score = 61 bits (147), Expect = 2e-008
Identities = 27/41 (65%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Frame = +3
Query: 231 KERPSRR-RAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPN 350
K P+++ +A KDPNKPKRPPSAFFVF+ FR++FK+KNPN
Sbjct: 27 KPAPAKKSKAVKDPNKPKRPPSAFFVFMEDFRKQFKEKNPN 67
>tr|B7FN80|B7FN80_MEDTR Putative uncharacterized protein OS=Medicago truncatula
PE=2 SV=1
Length = 142
Score = 61 bits (146), Expect = 2e-008
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3
Query: 237 RPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPN 350
R ++A KDPNKPKRPPSAFFVF+ FRE++KK +PN
Sbjct: 24 RKQTKKAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPN 61
>tr|O04418|O04418_MAIZE Putative uncharacterized protein OS=Zea mays GN=HMGd1
PE=2 SV=1
Length = 126
Score = 61 bits (146), Expect = 2e-008
Identities = 24/36 (66%), Positives = 34/36 (94%)
Frame = +3
Query: 246 RRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
+ +A+KDPNKPKRPPSAFFVF+ +FR+++K+K+PNV
Sbjct: 18 KTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNV 53
>tr|Q8W512|Q8W512_MAIZE HMG-like nucleosome/chromatin assembly factor D OS=Zea
mays GN=nfd101 PE=2 SV=1
Length = 126
Score = 61 bits (146), Expect = 2e-008
Identities = 24/36 (66%), Positives = 34/36 (94%)
Frame = +3
Query: 246 RRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
+ +A+KDPNKPKRPPSAFFVF+ +FR+++K+K+PNV
Sbjct: 18 KTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNV 53
>tr|A5BN89|A5BN89_VITVI Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_023376 PE=4 SV=1
Length = 166
Score = 60 bits (145), Expect = 3e-008
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +3
Query: 186 LGNERXXXXXXIRVAKERPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
LG + K + AKKDPNKPKRPPSAFFVFL +FR+ +K+++PNV
Sbjct: 26 LGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV 81
>tr|A7Q3F5|A7Q3F5_VITVI Chromosome chr13 scaffold_48, whole genome shotgun
sequence OS=Vitis vinifera GN=GSVIVT00029270001 PE=4 SV=1
Length = 115
Score = 60 bits (145), Expect = 3e-008
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +3
Query: 186 LGNERXXXXXXIRVAKERPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
LG + K + AKKDPNKPKRPPSAFFVFL +FR+ +K+++PNV
Sbjct: 50 LGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV 105
>tr|B4UW92|B4UW92_ARAHY High mobility group protein 1 OS=Arachis hypogaea PE=2
SV=1
Length = 139
Score = 60 bits (144), Expect = 4e-008
Identities = 26/37 (70%), Positives = 34/37 (91%), Gaps = 2/37 (5%)
Frame = +3
Query: 246 RRRAK--KDPNKPKRPPSAFFVFLGQFREEFKKKNPN 350
R++AK KDPNKPKRPPSAFFVF+ +FRE++KK++PN
Sbjct: 24 RKQAKKAKDPNKPKRPPSAFFVFMSEFREQYKKEHPN 60
>tr|P93704|P93704_CANGL HMG-1 OS=Canavalia gladiata PE=2 SV=1
Length = 141
Score = 60 bits (144), Expect = 4e-008
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +3
Query: 237 RPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNP 347
R ++A KDPNKPKRPPSAFFVF+ +FRE++KK++P
Sbjct: 24 RKQSKKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHP 60
>tr|O04692|O04692_TOBAC DNA-binding protein OS=Nicotiana tabacum GN=T231 PE=2
SV=1
Length = 142
Score = 60 bits (143), Expect = 5e-008
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = +3
Query: 228 AKERPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPN 350
A E ++A KDPNKPKRPPSAFFVF+ +FR+ +K+K+PN
Sbjct: 20 ATETKKAKKAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPN 60
>tr|A9NK65|A9NK65_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 157
Score = 59 bits (142), Expect = 6e-008
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 228 AKERPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
+++ R+A KDPNKPKRP SAFFVF+ FR+ +K+KNPNV
Sbjct: 36 SRQEKKGRKAAKDPNKPKRPASAFFVFMEDFRKTYKEKNPNV 77
>tr|A9Q9L0|A9Q9L0_PHYPA High mobility group protein B3 OS=Physcomitrella patens
GN=HMGB3 PE=2 SV=1
Length = 158
Score = 59 bits (142), Expect = 6e-008
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = +3
Query: 234 ERPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
++P + KDPN PKRPP+AFF+FL +FRE FK++NPNV
Sbjct: 39 KKPKGGKKLKDPNAPKRPPTAFFIFLNEFREVFKRENPNV 78
>tr|O49948|O49948_SOLTU High mobility group protein OS=Solanum tuberosum PE=2
SV=1
Length = 141
Score = 59 bits (141), Expect = 8e-008
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +3
Query: 228 AKERPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPN 350
A E + A KDPNKPKRPPSAFFVF+ +FR+ +K+K+PN
Sbjct: 20 ATESKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPN 60
>tr|B9HSP8|B9HSP8_POPTR High mobility group family OS=Populus trichocarpa
GN=HMGB910 PE=4 SV=1
Length = 176
Score = 59 bits (140), Expect = 1e-007
Identities = 28/44 (63%), Positives = 36/44 (81%), Gaps = 4/44 (9%)
Frame = +3
Query: 222 RVAKERPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPNV 353
RV KE+ + KKDPNKPKRPPSAFFVFL +FR+ +K+++PNV
Sbjct: 42 RVKKEKIT----KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV 81
>tr|B9DG70|B9DG70_ARATH AT2G17560 protein OS=Arabidopsis thaliana GN=At2g17560
PE=2 SV=1
Length = 134
Score = 58 bits (139), Expect = 1e-007
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +3
Query: 237 RPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPN 350
R + ++ KKDPN+PKRPPSAFFVFL FR+EF NPN
Sbjct: 22 RKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPN 59
>tr|O49598|O49598_ARATH HMG protein OS=Arabidopsis thaliana GN=HMGgamma PE=2
SV=1
Length = 138
Score = 58 bits (139), Expect = 1e-007
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +3
Query: 237 RPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPN 350
R + ++ KKDPN+PKRPPSAFFVFL FR+EF NPN
Sbjct: 22 RKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPN 59
>tr|Q42344|Q42344_ARATH HMG1-like protein OS=Arabidopsis thaliana GN=At2g17560
PE=2 SV=1
Length = 138
Score = 58 bits (139), Expect = 1e-007
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +3
Query: 237 RPSRRRAKKDPNKPKRPPSAFFVFLGQFREEFKKKNPN 350
R + ++ KKDPN+PKRPPSAFFVFL FR+EF NPN
Sbjct: 22 RKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPN 59
>tr|Q5NKN3|Q5NKN3_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=nfd103 PE=2
SV=1
Length = 157
Score = 58 bits (139), Expect = 1e-007
Identities = 27/41 (65%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Frame = +3
Query: 234 ERPSRRR---AKKDPNKPKRPPSAFFVFLGQFREEFKKKNP 347
E+P++ R A KDPNKPKR PSAFFVF+ +FR+EFK+KNP
Sbjct: 24 EKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNP 64
Database: UniProt/TrEMBL
Posted date: Sun May 10 14:41:50 2009
Number of letters in database: 2,506,224,640
Number of sequences in database: 7,695,149
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,571,562,118
Number of Sequences: 7695149
Number of Extensions: 96571562118
Number of Successful Extensions: 81645538
Number of sequences better than 0.0: 0
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