BLASTX 7.6.2 Query= RU04905 /QuerySize=956 (955 letters) Database: UniProt/TrEMBL; 7,695,149 sequences; 2,506,224,640 total letters Score E Sequences producing significant alignments: (bits) Value tr|B9SRG2|B9SRG2_RICCO U2 snrnp auxiliary factor, small subunit,... 98 1e-018 tr|Q99L29|Q99L29_MOUSE cDNA sequence BC003883 OS=Mus musculus GN... 95 8e-018 tr|B9MTN5|B9MTN5_POPTR Predicted protein OS=Populus trichocarpa ... 93 2e-017 tr|A7PPK3|A7PPK3_VITVI Chromosome chr8 scaffold_23, whole genome... 93 3e-017 tr|A9NVR9|A9NVR9_PICSI Putative uncharacterized protein OS=Picea... 92 7e-017 tr|C0PTJ1|C0PTJ1_PICSI Putative uncharacterized protein OS=Picea... 92 7e-017 tr|A9RKV0|A9RKV0_PHYPA Predicted protein (Fragment) OS=Physcomit... 91 2e-016 tr|A9TES1|A9TES1_PHYPA Predicted protein OS=Physcomitrella paten... 91 2e-016 tr|B9MYK3|B9MYK3_POPTR Predicted protein OS=Populus trichocarpa ... 91 2e-016 tr|Q1H8Q9|Q1H8Q9_CHERU Putative U2 snRNP auxiliary factor (Fragm... 89 3e-016 tr|B9SN77|B9SN77_RICCO U2 snrnp auxiliary factor, small subunit,... 89 4e-016 tr|A8HYQ9|A8HYQ9_CHLRE U2 snRNP auxiliary factor, small subunit ... 88 1e-015 tr|B7FJE0|B7FJE0_MEDTR Putative uncharacterized protein (Fragmen... 87 1e-015 tr|B8LNG3|B8LNG3_PICSI Putative uncharacterized protein OS=Picea... 86 3e-015 tr|A2Z2M2|A2Z2M2_ORYSI Putative uncharacterized protein OS=Oryza... 85 6e-015 tr|B7E7L8|B7E7L8_ORYSJ cDNA clone:001-044-E06, full insert seque... 85 6e-015 tr|B9H5X4|B9H5X4_POPTR Predicted protein OS=Populus trichocarpa ... 85 6e-015 tr|A8MRI1|A8MRI1_ARATH Uncharacterized protein At1g27650.2 OS=Ar... 85 8e-015 tr|B6T3Q5|B6T3Q5_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze... 85 8e-015 tr|B4FAF4|B4FAF4_MAIZE Putative uncharacterized protein OS=Zea m... 84 1e-014 tr|B6SY08|B6SY08_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze... 84 1e-014 tr|B6TCE1|B6TCE1_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze... 84 1e-014 tr|B6TRJ7|B6TRJ7_MAIZE Putative uncharacterized protein OS=Zea m... 84 1e-014 tr|B7EHH7|B7EHH7_ORYSJ Putative uncharacterized protein OS=Oryza... 84 1e-014 tr|B8AWR4|B8AWR4_ORYSI Putative uncharacterized protein OS=Oryza... 84 1e-014 tr|A7QPI3|A7QPI3_VITVI Chromosome chr18 scaffold_137, whole geno... 84 2e-014 tr|B9GPM3|B9GPM3_POPTR Predicted protein OS=Populus trichocarpa ... 84 2e-014 tr|B9R8U8|B9R8U8_RICCO U2 snrnp auxiliary factor, small subunit,... 84 2e-014 tr|B4FQ72|B4FQ72_MAIZE Putative uncharacterized protein OS=Zea m... 82 7e-014 tr|B6T7D3|B6T7D3_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze... 82 7e-014 >tr|B9SRG2|B9SRG2_RICCO U2 snrnp auxiliary factor, small subunit, putative OS=Ricinus communis GN=RCOM_0382140 PE=4 SV=1 Length = 313 Score = 98 bits (242), Expect = 1e-018 Identities = 49/80 (61%), Positives = 51/80 (63%), Gaps = 4/80 (5%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIXXXXXXXXXXXXXXXXXXX 594 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI Sbjct: 138 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI--SRELRRRLFGRNRRRRS 195 Query: 593 XXXXXXPQKHQRGGYQERPH 534 P +H+ GY ERPH Sbjct: 196 RSRSHSPSRHR--GYDERPH 213 >tr|Q99L29|Q99L29_MOUSE cDNA sequence BC003883 OS=Mus musculus GN=BC003883 PE=2 SV=1 Length = 310 Score = 95 bits (234), Expect = 8e-018 Identities = 48/80 (60%), Positives = 51/80 (63%), Gaps = 4/80 (5%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIXXXXXXXXXXXXXXXXXXX 594 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI Sbjct: 136 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI--SRELRRQLFGRYRRRHS 193 Query: 593 XXXXXXPQKHQRGGYQERPH 534 PQ H+ G+ +RPH Sbjct: 194 RSRSRSPQAHR--GHGDRPH 211 >tr|B9MTN5|B9MTN5_POPTR Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_676151 PE=4 SV=1 Length = 209 Score = 93 bits (230), Expect = 2e-017 Identities = 41/41 (100%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI Sbjct: 138 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 178 >tr|A7PPK3|A7PPK3_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021681001 PE=4 SV=1 Length = 317 Score = 93 bits (229), Expect = 3e-017 Identities = 40/41 (97%), Positives = 41/41 (100%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNFMHLKKI Sbjct: 136 GRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKI 176 >tr|A9NVR9|A9NVR9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 312 Score = 92 bits (226), Expect = 7e-017 Identities = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKI Sbjct: 136 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKI 176 >tr|C0PTJ1|C0PTJ1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 312 Score = 92 bits (226), Expect = 7e-017 Identities = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKI Sbjct: 136 GRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKI 176 >tr|A9RKV0|A9RKV0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_25638 PE=4 SV=1 Length = 283 Score = 91 bits (223), Expect = 2e-016 Identities = 39/41 (95%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPII+DFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKI Sbjct: 139 GRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKI 179 >tr|A9TES1|A9TES1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_194373 PE=4 SV=1 Length = 304 Score = 91 bits (223), Expect = 2e-016 Identities = 39/41 (95%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPII+DFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKI Sbjct: 139 GRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKI 179 >tr|B9MYK3|B9MYK3_POPTR Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_741667 PE=4 SV=1 Length = 179 Score = 91 bits (223), Expect = 2e-016 Identities = 39/41 (95%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+I Sbjct: 136 GRPIIVDFSPVTDFREATCRQYEENACNRGGYCNFMHLKRI 176 >tr|Q1H8Q9|Q1H8Q9_CHERU Putative U2 snRNP auxiliary factor (Fragment) OS=Chenopodium rubrum GN=u2snRNP PE=2 SV=1 Length = 151 Score = 89 bits (220), Expect = 3e-016 Identities = 39/41 (95%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+I Sbjct: 81 GRPIIVDFSPVTDFREATCRQYEENNCNRGGYCNFMHLKRI 121 >tr|B9SN77|B9SN77_RICCO U2 snrnp auxiliary factor, small subunit, putative OS=Ricinus communis GN=RCOM_1186310 PE=4 SV=1 Length = 322 Score = 89 bits (219), Expect = 4e-016 Identities = 38/41 (92%), Positives = 39/41 (95%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+I Sbjct: 136 GRPIIADFSPVTDFREATCRQYEENACNRGGYCNFMHLKRI 176 >tr|A8HYQ9|A8HYQ9_CHLRE U2 snRNP auxiliary factor, small subunit OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_142476 PE=4 SV=1 Length = 273 Score = 88 bits (216), Expect = 1e-015 Identities = 38/41 (92%), Positives = 39/41 (95%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIV+FSPVTDFREATCRQYEEN CNRGGYCNFMHLK I Sbjct: 137 GRPIIVEFSPVTDFREATCRQYEENTCNRGGYCNFMHLKPI 177 >tr|B7FJE0|B7FJE0_MEDTR Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1 Length = 228 Score = 87 bits (215), Expect = 1e-015 Identities = 37/41 (90%), Positives = 39/41 (95%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPI+ DFSPVTDFREATCRQYEEN CNRGGYCNFMH+KKI Sbjct: 136 GRPILADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKI 176 >tr|B8LNG3|B8LNG3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 344 Score = 86 bits (212), Expect = 3e-015 Identities = 38/40 (95%) Frame = -3 Query: 770 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 R IIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKI Sbjct: 137 RAIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKI 176 >tr|A2Z2M2|A2Z2M2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31864 PE=4 SV=1 Length = 290 Score = 85 bits (209), Expect = 6e-015 Identities = 36/41 (87%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIV+FSPV+DFREATCRQYEEN CNRGGYCNFMH+K+I Sbjct: 136 GRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEI 176 >tr|B7E7L8|B7E7L8_ORYSJ cDNA clone:001-044-E06, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 290 Score = 85 bits (209), Expect = 6e-015 Identities = 36/41 (87%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIV+FSPV+DFREATCRQYEEN CNRGGYCNFMH+K+I Sbjct: 136 GRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEI 176 >tr|B9H5X4|B9H5X4_POPTR Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_560016 PE=4 SV=1 Length = 272 Score = 85 bits (209), Expect = 6e-015 Identities = 37/41 (90%), Positives = 38/41 (92%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K I Sbjct: 136 GRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLI 176 >tr|A8MRI1|A8MRI1_ARATH Uncharacterized protein At1g27650.2 OS=Arabidopsis thaliana GN=At1g27650 PE=4 SV=1 Length = 246 Score = 85 bits (208), Expect = 8e-015 Identities = 36/41 (87%), Positives = 38/41 (92%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K + Sbjct: 86 GRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLV 126 >tr|B6T3Q5|B6T3Q5_MAIZE Splicing factor U2af 38 kDa subunit OS=Zea mays PE=2 SV=1 Length = 305 Score = 85 bits (208), Expect = 8e-015 Identities = 42/80 (52%), Positives = 48/80 (60%), Gaps = 3/80 (3%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIXXXXXXXXXXXXXXXXXXX 594 GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I Sbjct: 136 GRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDLRRKLYGRSASRRYHA 195 Query: 593 XXXXXXPQKHQRGGYQERPH 534 P QR GY+E H Sbjct: 196 RSRSPPP---QRRGYREDYH 212 >tr|B4FAF4|B4FAF4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 307 Score = 84 bits (206), Expect = 1e-014 Identities = 35/41 (85%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I Sbjct: 136 GRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQI 176 >tr|B6SY08|B6SY08_MAIZE Splicing factor U2af 38 kDa subunit OS=Zea mays PE=2 SV=1 Length = 307 Score = 84 bits (206), Expect = 1e-014 Identities = 35/41 (85%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I Sbjct: 136 GRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQI 176 >tr|B6TCE1|B6TCE1_MAIZE Splicing factor U2af 38 kDa subunit OS=Zea mays PE=2 SV=1 Length = 307 Score = 84 bits (206), Expect = 1e-014 Identities = 35/41 (85%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I Sbjct: 136 GRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQI 176 >tr|B6TRJ7|B6TRJ7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 299 Score = 84 bits (206), Expect = 1e-014 Identities = 35/41 (85%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I Sbjct: 136 GRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQI 176 >tr|B7EHH7|B7EHH7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_19555 PE=2 SV=1 Length = 304 Score = 84 bits (206), Expect = 1e-014 Identities = 35/41 (85%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I Sbjct: 136 GRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQI 176 >tr|B8AWR4|B8AWR4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20991 PE=4 SV=1 Length = 308 Score = 84 bits (206), Expect = 1e-014 Identities = 35/41 (85%), Positives = 40/41 (97%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I Sbjct: 136 GRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQI 176 >tr|A7QPI3|A7QPI3_VITVI Chromosome chr18 scaffold_137, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002951001 PE=4 SV=1 Length = 272 Score = 84 bits (205), Expect = 2e-014 Identities = 36/41 (87%), Positives = 38/41 (92%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I Sbjct: 136 GRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 176 >tr|B9GPM3|B9GPM3_POPTR Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_642753 PE=4 SV=1 Length = 273 Score = 84 bits (205), Expect = 2e-014 Identities = 36/41 (87%), Positives = 38/41 (92%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I Sbjct: 136 GRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 176 >tr|B9R8U8|B9R8U8_RICCO U2 snrnp auxiliary factor, small subunit, putative OS=Ricinus communis GN=RCOM_1602290 PE=4 SV=1 Length = 272 Score = 84 bits (205), Expect = 2e-014 Identities = 36/41 (87%), Positives = 38/41 (92%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 651 GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I Sbjct: 136 GRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 176 >tr|B4FQ72|B4FQ72_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 287 Score = 82 bits (200), Expect = 7e-014 Identities = 37/78 (47%), Positives = 45/78 (57%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIXXXXXXXXXXXXXXXXXXX 594 GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNFMH+K++ Sbjct: 136 GRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSH 195 Query: 593 XXXXXXPQKHQRGGYQER 540 P ++R G R Sbjct: 196 SRGSRSPSPYRRRGSSSR 213 >tr|B6T7D3|B6T7D3_MAIZE Splicing factor U2af 38 kDa subunit OS=Zea mays PE=2 SV=1 Length = 284 Score = 82 bits (200), Expect = 7e-014 Identities = 37/78 (47%), Positives = 45/78 (57%) Frame = -3 Query: 773 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIXXXXXXXXXXXXXXXXXXX 594 GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNFMH+K++ Sbjct: 136 GRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSH 195 Query: 593 XXXXXXPQKHQRGGYQER 540 P ++R G R Sbjct: 196 SRGSRSPSPYRRRGSSSR 213 Database: UniProt/TrEMBL Posted date: Sun May 10 14:41:50 2009 Number of letters in database: 2,506,224,640 Number of sequences in database: 7,695,149 Lambda K H 0.267 0.041 0.140 Gapped Lambda K H 0.267 0.041 0.140 Matrix: blosum62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 126,848,017,150 Number of Sequences: 7695149 Number of Extensions: 126848017150 Number of Successful Extensions: 92003056 Number of sequences better than 0.0: 0 |