BLASTX 7.6.2
Query= RU05424 /QuerySize=877
(876 letters)
Database: UniProt/TrEMBL;
7,695,149 sequences; 2,506,224,640 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q5K545|Q5K545_SOLTU Bromodomain-containing RNA-binding protei... 110 2e-022
tr|Q5K542|Q5K542_TOBAC Bromodomain-containing RNA-binding protei... 109 3e-022
tr|Q5K541|Q5K541_TOBAC Bromodomain-containing RNA-binding protei... 107 1e-021
tr|Q5K544|Q5K544_NICBE Bromodomain-containing RNA-binding protei... 107 1e-021
tr|Q9AR00|Q9AR00_SOLLC PSTVd RNA-biding protein, Virp1 OS=Solanu... 107 2e-021
tr|Q5K543|Q5K543_NICBE Bromodomain-containing RNA-binding protei... 106 2e-021
tr|B9GJ11|B9GJ11_POPTR Global transcription factor group OS=Popu... 101 8e-020
tr|A7QS98|A7QS98_VITVI Chromosome chr3 scaffold_157, whole genom... 86 4e-015
tr|B7FLR5|B7FLR5_MEDTR Putative uncharacterized protein (Fragmen... 82 6e-014
tr|A7R202|A7R202_VITVI Chromosome undetermined scaffold_388, who... 72 4e-011
tr|B9RX53|B9RX53_RICCO Bromodomain-containing protein, putative ... 71 1e-010
>tr|Q5K545|Q5K545_SOLTU Bromodomain-containing RNA-binding protein 1 OS=Solanum
tuberosum GN=brp1 PE=2 SV=1
Length = 602
Score = 110 bits (274), Expect = 2e-022
Identities = 69/170 (40%), Positives = 93/170 (54%), Gaps = 11/170 (6%)
Frame = +3
Query: 225 ASAVLANRNEPNWPQQPRXXXXXXXFMGKVPFSXXXXXXXXXKT--KFXXXXXXXXXXDF 398
ASAVLA+RNE +W Q FMGK PFS K
Sbjct: 2 ASAVLASRNESSWAQ---SGGAGGGFMGKTPFSHTQLNPNHNPNPKKKQKQFHHTSNGRH 58
Query: 399 NDESPAVTQTASDDASSINHHRRSNTTNTAAADFNLIQSQYVSFNIATYSRKELVELKNR 578
DESPAVTQTASDDA S N +TTN +F Y++FN+ +Y++ E+ EL++R
Sbjct: 59 IDESPAVTQTASDDAYSFNQRPIESTTNVDGLNF----GGYLTFNVVSYNKGEVNELRSR 114
Query: 579 LLSELDQIRVLKNRIEAGDFNPRPAQPKKPNTTKKVAGSKRPLPIAPGKD 728
LL+E++QIR LK+RIE+G + P+ +KK++G+KRP P KD
Sbjct: 115 LLAEVEQIRNLKDRIESGQLS--TTNPRSQGKSKKLSGNKRPTPSGSSKD 162
>tr|Q5K542|Q5K542_TOBAC Bromodomain-containing RNA-binding protein 1
OS=Nicotiana tabacum GN=brp1 PE=2 SV=1
Length = 617
Score = 109 bits (272), Expect = 3e-022
Identities = 69/182 (37%), Positives = 97/182 (53%), Gaps = 11/182 (6%)
Frame = +3
Query: 225 ASAVLANRNEPNWPQQPRXXXXXXXFMGKVPFSXXXXXXXXXKT--KFXXXXXXXXXXDF 398
A AVLA+RNE +W Q FMGK P+S K
Sbjct: 2 AFAVLASRNESSWAQ---SGGAGGGFMGKTPYSHTHLNPNSNPNPKKKQKQFHHASNGRH 58
Query: 399 NDESPAVTQTASDDASSINHHRRSNTTNTAAADFNLIQSQYVSFNIATYSRKELVELKNR 578
NDESPAVTQTASDDA S N ++TN + Y+++N+A+Y++ EL EL++R
Sbjct: 59 NDESPAVTQTASDDAYSFNQRPIESSTNVDGLNL----GGYMTYNVASYNKTELHELRSR 114
Query: 579 LLSELDQIRVLKNRIEAGDFNPRPAQPKKPNTTKKVAGSKRPLPIAPGKDSNSNLKRSHS 758
L++EL+QIR LK+RIE+G + + P+ +KK++G+KRP P KD L +
Sbjct: 115 LVAELEQIRNLKDRIESGQLS--TSNPRSHGKSKKLSGNKRPTPSGSSKDRKKLLNGVDN 172
Query: 759 EN 764
N
Sbjct: 173 RN 174
>tr|Q5K541|Q5K541_TOBAC Bromodomain-containing RNA-binding protein 2
OS=Nicotiana tabacum GN=brp2 PE=2 SV=1
Length = 616
Score = 107 bits (267), Expect = 1e-021
Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 11/170 (6%)
Frame = +3
Query: 225 ASAVLANRNEPNWPQQPRXXXXXXXFMGKVPFSXXXXXXXXXKT--KFXXXXXXXXXXDF 398
ASAVLA+RNE +W Q FMGK P+S K
Sbjct: 2 ASAVLASRNESSWAQ---SGGAGGGFMGKTPYSHTQLNPNSNPNPKKKQKQFHHASNGRL 58
Query: 399 NDESPAVTQTASDDASSINHHRRSNTTNTAAADFNLIQSQYVSFNIATYSRKELVELKNR 578
DESPAVTQTASDDA S N ++TN + Y+++N A+Y++ EL EL++R
Sbjct: 59 TDESPAVTQTASDDAYSFNQRPIESSTNVDGLNL----GGYMTYNXASYNKTELHELRSR 114
Query: 579 LLSELDQIRVLKNRIEAGDFNPRPAQPKKPNTTKKVAGSKRPLPIAPGKD 728
L++EL+QIR LK+RIE+G + + P+ +KK++G+KRP P KD
Sbjct: 115 LVAELEQIRNLKDRIESGQLS--TSNPRSHGKSKKLSGNKRPTPSGSSKD 162
>tr|Q5K544|Q5K544_NICBE Bromodomain-containing RNA-binding protein 1
OS=Nicotiana benthamiana GN=brp1 PE=2 SV=1
Length = 615
Score = 107 bits (266), Expect = 1e-021
Identities = 67/170 (39%), Positives = 94/170 (55%), Gaps = 11/170 (6%)
Frame = +3
Query: 225 ASAVLANRNEPNWPQQPRXXXXXXXFMGKVPFSXXXX--XXXXXKTKFXXXXXXXXXXDF 398
ASAVLA+RNE +W Q FMGK P+S K
Sbjct: 2 ASAVLASRNESSWAQ---SGGAGGGFMGKTPYSHTHLNPNSNPKPKKKQKQFHHASNGRQ 58
Query: 399 NDESPAVTQTASDDASSINHHRRSNTTNTAAADFNLIQSQYVSFNIATYSRKELVELKNR 578
NDESPAVTQTASDDA S N ++TN + Y+++N+A+Y++ EL EL++R
Sbjct: 59 NDESPAVTQTASDDAYSFNQRPIESSTNVDGLNL----GGYMTYNVASYNKTELHELRSR 114
Query: 579 LLSELDQIRVLKNRIEAGDFNPRPAQPKKPNTTKKVAGSKRPLPIAPGKD 728
L++EL+QIR LK+RIE+G + + P+ +KK++G+KR P KD
Sbjct: 115 LVAELEQIRSLKDRIESGQLS--TSNPRSHGKSKKLSGNKRATPSGSSKD 162
>tr|Q9AR00|Q9AR00_SOLLC PSTVd RNA-biding protein, Virp1 OS=Solanum lycopersicum
PE=2 SV=1
Length = 602
Score = 107 bits (265), Expect = 2e-021
Identities = 66/170 (38%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Frame = +3
Query: 225 ASAVLANRNEPNWPQQPRXXXXXXXFMGKVPFSXXXXXXXXXKT--KFXXXXXXXXXXDF 398
ASAVLA+RNE +W Q FMGK P+S K
Sbjct: 2 ASAVLASRNESSWAQ---SGGAGGGFMGKTPYSHTQLNPNHNPNPKKKQKQFHHTSNGRH 58
Query: 399 NDESPAVTQTASDDASSINHHRRSNTTNTAAADFNLIQSQYVSFNIATYSRKELVELKNR 578
D+SPAVTQTASDDA S N +TTN +F Y++FN+ +Y++ E+ EL++R
Sbjct: 59 MDDSPAVTQTASDDAYSFNQRPIESTTNVDGLNF----GGYLTFNVVSYNKAEVNELRSR 114
Query: 579 LLSELDQIRVLKNRIEAGDFNPRPAQPKKPNTTKKVAGSKRPLPIAPGKD 728
L++E++QIR LK+RIE+G + P+ +KK +G+KRP P KD
Sbjct: 115 LMAEVEQIRNLKDRIESGQLS--TTNPRSQGKSKKQSGNKRPTPSGSSKD 162
>tr|Q5K543|Q5K543_NICBE Bromodomain-containing RNA-binding protein 2
OS=Nicotiana benthamiana GN=brp2 PE=2 SV=1
Length = 613
Score = 106 bits (264), Expect = 2e-021
Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 11/170 (6%)
Frame = +3
Query: 225 ASAVLANRNEPNWPQQPRXXXXXXXFMGKVPFSXXXXXXXXXKT--KFXXXXXXXXXXDF 398
ASAVLA+RNE +W Q FMGK P+S K
Sbjct: 2 ASAVLASRNESSWAQ---SGGAGGGFMGKTPYSHTHLNPNSNPNPKKKQKQFHHASNGCH 58
Query: 399 NDESPAVTQTASDDASSINHHRRSNTTNTAAADFNLIQSQYVSFNIATYSRKELVELKNR 578
NDE PAVTQTASDDA S N ++ N + Y+++N+A+YS+ EL +L++R
Sbjct: 59 NDELPAVTQTASDDAYSFNQRPIESSANVDGLNL----GGYMTYNVASYSKTELHDLRSR 114
Query: 579 LLSELDQIRVLKNRIEAGDFNPRPAQPKKPNTTKKVAGSKRPLPIAPGKD 728
L++EL+QIR LK+RIE+G + + P+ +KK++G+KRP P KD
Sbjct: 115 LVAELEQIRNLKDRIESGQLS--TSNPRSHGKSKKLSGNKRPTPSGSSKD 162
>tr|B9GJ11|B9GJ11_POPTR Global transcription factor group OS=Populus trichocarpa
GN=GTE906 PE=4 SV=1
Length = 474
Score = 101 bits (251), Expect = 8e-020
Identities = 65/131 (49%), Positives = 87/131 (66%), Gaps = 17/131 (12%)
Frame = +3
Query: 402 DESPAVTQTASDDASSINHHRRSNTTNTAAADFNLIQSQYVSFNIATYSRKELVELKNRL 581
DESP+ ASDDASSIN ++N DFN +V+FN+ +YS+KEL+ELKNRL
Sbjct: 59 DESPS---AASDDASSINRRPQNN-----HQDFN--TGGFVTFNVGSYSKKELIELKNRL 108
Query: 582 LSELDQIRVLKNRIEAGDFNPRPAQ----PKKPNTTKKVAGSKRPLPIAPGKDSNSNLKR 749
+ EL++IR LKNRIE+ + R + K+ +T KKV+G+KRP P AP + +NLKR
Sbjct: 109 VHELEKIRDLKNRIESSESQIRQSSNFSYKKQTSTNKKVSGNKRPFP-AP--SNFNNLKR 165
Query: 750 SHSENVILMKN 782
S+ EN LMKN
Sbjct: 166 SNPENAQLMKN 176
>tr|A7QS98|A7QS98_VITVI Chromosome chr3 scaffold_157, whole genome shotgun
sequence OS=Vitis vinifera GN=GSVIVT00005742001 PE=4 SV=1
Length = 537
Score = 86 bits (210), Expect = 4e-015
Identities = 51/113 (45%), Positives = 71/113 (62%), Gaps = 11/113 (9%)
Frame = +3
Query: 468 SNTTNTAAADFNLIQSQYVSFNIATYSRKELVELKNRLLSELDQIRVLKNRIEAGDF--- 638
S+ + +FN + +YV+FNI +YSRK+LV+LKNRL+SEL++I+ L NRIE+GD
Sbjct: 70 SSFNQRSIVEFN--RGRYVTFNIGSYSRKDLVQLKNRLVSELEKIQNLSNRIESGDLQLR 127
Query: 639 --NPRPAQPKKPNTTKKVAGSKRPLPIAPGKDSNSNLKRSHSENVILMKNVGR 791
R A ++ KK+AG+KRP P DS KRS +EN LMK G+
Sbjct: 128 SGGDRTANKQQRPNNKKIAGNKRPPPF----DSGRGPKRSAAENASLMKLCGQ 176
>tr|B7FLR5|B7FLR5_MEDTR Putative uncharacterized protein (Fragment) OS=Medicago
truncatula PE=2 SV=1
Length = 471
Score = 82 bits (200), Expect = 6e-014
Identities = 48/97 (49%), Positives = 62/97 (63%), Gaps = 10/97 (10%)
Frame = +3
Query: 513 SQYVSFNIATYSRKELVELKNRLLSELDQIRVLKNRIEAGDFNPR----PAQPKKPNTTK 680
SQYV+FNI +YS+ EL +LKNRL+SELDQIR K RIE+G+F PR P K + +K
Sbjct: 60 SQYVTFNIESYSKTELHDLKNRLVSELDQIRQHKTRIESGEFKPRLNHNGGGPNKKSGSK 119
Query: 681 KVAGSKRPLPIAPGKDSNSNLKRSHSENVILMKNVGR 791
K +G+KRP P + LK+S SE MK G+
Sbjct: 120 KFSGNKRPFP------AEKELKKSKSEIGDAMKACGQ 150
>tr|A7R202|A7R202_VITVI Chromosome undetermined scaffold_388, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00012515001 PE=4 SV=1
Length = 563
Score = 72 bits (176), Expect = 4e-011
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Frame = +3
Query: 399 NDESPAVTQTASDDASSINHHRRSNTTNTAAADFNLIQSQYVSFNIATYSRKELVELKNR 578
N+ SP++ ++D+SS+N S ++ Q YV+FN+ YSR+EL ELK R
Sbjct: 27 NNNSPSLLSPVANDSSSLNRKAISLNDRKESS-----QGGYVTFNLGAYSRRELKELKKR 81
Query: 579 LLSELDQIRVLKNRIEAGDFNPRPAQP----KKPNTTKKVAGSKRPLPIAPGKDS 731
LL ELDQ+R L+NRIE+ DF R P + ++ + RP P+ K S
Sbjct: 82 LLLELDQVRNLRNRIESRDFESRSVYPAPHLSSSHGGREAISTPRPPPLQINKRS 136
>tr|B9RX53|B9RX53_RICCO Bromodomain-containing protein, putative OS=Ricinus
communis GN=RCOM_0817840 PE=4 SV=1
Length = 634
Score = 71 bits (172), Expect = 1e-010
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Frame = +3
Query: 411 PAVTQTASDDASSINHHRRSNTTNTAAADFNLIQSQYVSFNIATYSRKELVELKNRLLSE 590
P V ASS + + A+DFN YV+FNI +YS+KEL+ELK+RL++E
Sbjct: 108 PPVNFDIHPAASSDDASSINRRPAATASDFN----SYVTFNIGSYSKKELLELKSRLVAE 163
Query: 591 LDQIRVLKNRIEAGDFNPRPAQP----KKPNTTKKVAGSKRPLPIA 716
L+QIR LKNRI++ + P KK N KKV G+KRP P A
Sbjct: 164 LEQIRQLKNRIDSSQSFQIRSTPNFNGKKQN--KKVTGNKRPFPSA 207
Database: UniProt/TrEMBL
Posted date: Sun May 10 14:41:50 2009
Number of letters in database: 2,506,224,640
Number of sequences in database: 7,695,149
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,832,537,585
Number of Sequences: 7695149
Number of Extensions: 131832537585
Number of Successful Extensions: 100465260
Number of sequences better than 0.0: 0
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