BLASTX 7.6.2
Query= RU05863 /QuerySize=952
(951 letters)
Database: UniProt/TrEMBL;
7,695,149 sequences; 2,506,224,640 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q4ZH67|Q4ZH67_CUCSA High mobility group protein OS=Cucumis sa... 95 8e-018
tr|O49948|O49948_SOLTU High mobility group protein OS=Solanum tu... 83 3e-014
tr|B9R8P6|B9R8P6_RICCO DNA-binding protein MNB1B, putative OS=Ri... 82 4e-014
tr|A7QWN3|A7QWN3_VITVI Chromosome chr4 scaffold_205, whole genom... 80 3e-013
tr|A8MQS4|A8MQS4_ARATH Uncharacterized protein At1g20696.3 OS=Ar... 79 4e-013
tr|P93047|P93047_ARATH At1g20690/F2D10_15 OS=Arabidopsis thalian... 79 4e-013
tr|Q9LM85|Q9LM85_ARATH F2D10.18 OS=Arabidopsis thaliana PE=4 SV=1 79 4e-013
tr|O04692|O04692_TOBAC DNA-binding protein OS=Nicotiana tabacum ... 78 8e-013
tr|A9PD33|A9PD33_POPTR Putative uncharacterized protein OS=Popul... 77 1e-012
tr|B9GQ02|B9GQ02_POPTR High mobility group family OS=Populus tri... 77 1e-012
tr|B9H672|B9H672_POPTR High mobility group family OS=Populus tri... 77 1e-012
tr|A9PHM9|A9PHM9_POPTR Putative uncharacterized protein OS=Popul... 77 2e-012
tr|B4UW93|B4UW93_ARAHY High mobility group protein 2 OS=Arachis ... 76 3e-012
tr|B9H5J0|B9H5J0_POPTR High mobility group family OS=Populus tri... 76 3e-012
tr|Q2L6T4|Q2L6T4_ARATH Uncharacterized protein At1g20696.2 OS=Ar... 76 3e-012
tr|A8MQZ3|A8MQZ3_ARATH Uncharacterized protein At1g20693.3 OS=Ar... 75 5e-012
tr|O49596|O49596_ARATH HMG protein OS=Arabidopsis thaliana GN=HM... 75 5e-012
tr|Q2V4M2|Q2V4M2_ARATH Uncharacterized protein At1g20693.2 OS=Ar... 75 5e-012
tr|B4UW92|B4UW92_ARAHY High mobility group protein 1 OS=Arachis ... 75 9e-012
tr|Q41026|Q41026_PEA HMG 1 protein OS=Pisum sativum PE=2 SV=1 74 1e-011
tr|Q1EMR5|Q1EMR5_PLAMJ HMG-protein (Fragment) OS=Plantago major ... 74 1e-011
tr|B6TXE9|B6TXE9_MAIZE HMG1/2-like protein OS=Zea mays PE=2 SV=1 73 3e-011
>tr|Q4ZH67|Q4ZH67_CUCSA High mobility group protein OS=Cucumis sativus PE=2
SV=1
Length = 146
Score = 95 bits (234), Expect = 8e-018
Identities = 46/72 (63%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = +2
Query: 134 KGGKSRAAAPKRSDTKLXXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREKYKKEH 313
KGGKS+ APK++DTKL DPNKPKRPASAFFVFMEEFR++YKKEH
Sbjct: 2 KGGKSK-GAPKKTDTKLKSKSAGASKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKEH 60
Query: 314 PNNKSVAAVSES 349
PNNKSVAAV ++
Sbjct: 61 PNNKSVAAVGKA 72
Score = 81 bits (198), Expect = 1e-013
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDNG 584
VGKAGG+KWKS+SDAEKAPY KAEKRK EYNK+M YNK+ AEG NG
Sbjct: 69 VGKAGGDKWKSMSDAEKAPYINKAEKRKTEYNKSMQAYNKRIAEGGNG 116
>tr|O49948|O49948_SOLTU High mobility group protein OS=Solanum tuberosum PE=2
SV=1
Length = 141
Score = 83 bits (203), Expect = 3e-014
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGD 578
VGKAGG+KWK LSD EKAPYQAKAEKRK EY KNMD YNKK A GD
Sbjct: 67 VGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKLAAGD 112
>tr|B9R8P6|B9R8P6_RICCO DNA-binding protein MNB1B, putative OS=Ricinus communis
GN=RCOM_1601350 PE=4 SV=1
Length = 145
Score = 82 bits (202), Expect = 4e-014
Identities = 43/72 (59%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +2
Query: 134 KGGKSRAAAPKRSDTKLXXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREKYKKEH 313
KGGKS+A A K S + DPNKPKRPASAFFVFMEEFRE+YKKEH
Sbjct: 2 KGGKSKADA-KNSKLSVNKKPVKATKKAGKAAKDPNKPKRPASAFFVFMEEFREQYKKEH 60
Query: 314 PNNKSVAAVSES 349
P NKSVAAV ++
Sbjct: 61 PKNKSVAAVGKA 72
>tr|A7QWN3|A7QWN3_VITVI Chromosome chr4 scaffold_205, whole genome shotgun
sequence OS=Vitis vinifera GN=GSVIVT00008729001 PE=4 SV=1
Length = 152
Score = 80 bits (195), Expect = 3e-013
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKAGG+KWKSLS+AEKAPY AKAEKRK EYNK+M YNK+ AEG
Sbjct: 78 VGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMAEG 122
>tr|A8MQS4|A8MQS4_ARATH Uncharacterized protein At1g20696.3 OS=Arabidopsis
thaliana GN=At1g20696 PE=4 SV=1
Length = 140
Score = 79 bits (194), Expect = 4e-013
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKAGGEKWKSLSD+EKAPY AKA+KRKVEY KNM YNKK EG
Sbjct: 66 VGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEG 110
>tr|P93047|P93047_ARATH At1g20690/F2D10_15 OS=Arabidopsis thaliana GN=HMG1 PE=2
SV=1
Length = 141
Score = 79 bits (194), Expect = 4e-013
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKAGGEKWKSLSD+EKAPY AKA+KRKVEY KNM YNKK EG
Sbjct: 66 VGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEG 110
>tr|Q9LM85|Q9LM85_ARATH F2D10.18 OS=Arabidopsis thaliana PE=4 SV=1
Length = 662
Score = 79 bits (194), Expect = 4e-013
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKAGGEKWKSLSD+EKAPY AKA+KRKVEY KNM YNKK EG
Sbjct: 587 VGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEG 631
Score = 75 bits (184), Expect = 5e-012
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKA G+KWKSLSD+EKAPY AKAEKRKVEY KN+ YNKK EG
Sbjct: 446 VGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 490
>tr|O04692|O04692_TOBAC DNA-binding protein OS=Nicotiana tabacum GN=T231 PE=2
SV=1
Length = 142
Score = 78 bits (191), Expect = 8e-013
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQA 569
VGKAGG+ WK LS+AEKAPYQAKAEKRK EY KNMD YN+KQA
Sbjct: 67 VGKAGGDAWKKLSEAEKAPYQAKAEKRKAEYQKNMDAYNRKQA 109
>tr|A9PD33|A9PD33_POPTR Putative uncharacterized protein OS=Populus trichocarpa
PE=2 SV=1
Length = 144
Score = 77 bits (189), Expect = 1e-012
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = +2
Query: 131 MKGGKSRAAAPKRSDTKL-XXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREKYKK 307
MKGG+S++ + + +D KL DPNKPKRPASAFFVFME+FR++YK+
Sbjct: 1 MKGGRSKSDS-RNNDAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKE 59
Query: 308 EHPNNKSVAAVSES 349
HPNNKSVAAV ++
Sbjct: 60 SHPNNKSVAAVGKA 73
Score = 75 bits (182), Expect = 9e-012
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDN 581
VGKAGG+KWKSLS+AEKAP+ AKAEKRK EYNK+M YNK+ A G++
Sbjct: 70 VGKAGGDKWKSLSEAEKAPFAAKAEKRKFEYNKDMAAYNKRLAGGND 116
>tr|B9GQ02|B9GQ02_POPTR High mobility group family OS=Populus trichocarpa
GN=HMGB901 PE=4 SV=1
Length = 152
Score = 77 bits (189), Expect = 1e-012
Identities = 42/77 (54%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = +2
Query: 131 MKGGKSRA--AAPKRSDTK--LXXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREK 298
MKGG+S++ + K S K DPNKPKRPASAFFVFMEEFRE+
Sbjct: 1 MKGGRSKSDTKSAKLSVNKKPTKGAAAAAAKKSGKAAKDPNKPKRPASAFFVFMEEFREQ 60
Query: 299 YKKEHPNNKSVAAVSES 349
YKKEHP NKSVAAV ++
Sbjct: 61 YKKEHPKNKSVAAVGKA 77
Score = 77 bits (188), Expect = 2e-012
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKAGG+KWKSLS AEKAPY AKA+KRKVEY K M YNK+QAEG
Sbjct: 74 VGKAGGDKWKSLSAAEKAPYVAKADKRKVEYEKKMKAYNKEQAEG 118
>tr|B9H672|B9H672_POPTR High mobility group family OS=Populus trichocarpa
GN=HMGB915 PE=4 SV=1
Length = 144
Score = 77 bits (189), Expect = 1e-012
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = +2
Query: 131 MKGGKSRAAAPKRSDTKL-XXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREKYKK 307
MKGG+S++ + + +D KL DPNKPKRPASAFFVFME+FR++YK+
Sbjct: 1 MKGGRSKSDS-RNNDAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKE 59
Query: 308 EHPNNKSVAAVSES 349
HPNNKSVAAV ++
Sbjct: 60 SHPNNKSVAAVGKA 73
Score = 76 bits (186), Expect = 3e-012
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDN 581
VGKAGG+KWKSLS+AEKAPY AKAEKRK EYNK+M YNK+ A G++
Sbjct: 70 VGKAGGDKWKSLSEAEKAPYAAKAEKRKFEYNKDMAAYNKRLAGGND 116
>tr|A9PHM9|A9PHM9_POPTR Putative uncharacterized protein OS=Populus trichocarpa
PE=2 SV=1
Length = 151
Score = 77 bits (188), Expect = 2e-012
Identities = 42/77 (54%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = +2
Query: 131 MKGGKSRA--AAPKRSDTK--LXXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREK 298
MKGG+S++ + K S K DPNKPKRPASAFFVFMEEFRE+
Sbjct: 1 MKGGRSKSDTKSAKLSVNKKPTKGGAAAAAKKSGKAAKDPNKPKRPASAFFVFMEEFREQ 60
Query: 299 YKKEHPNNKSVAAVSES 349
YKKEHP NKSVAAV ++
Sbjct: 61 YKKEHPKNKSVAAVGKA 77
Score = 77 bits (188), Expect = 2e-012
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKAGG+KWKSLS AEKAPY AKA+KRKVEY K M YNK+QAEG
Sbjct: 74 VGKAGGDKWKSLSAAEKAPYVAKADKRKVEYEKKMKAYNKEQAEG 118
>tr|B4UW93|B4UW93_ARAHY High mobility group protein 2 OS=Arachis hypogaea PE=2
SV=1
Length = 153
Score = 76 bits (186), Expect = 3e-012
Identities = 35/48 (72%), Positives = 38/48 (79%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDNG 584
VGKA G KWK +SDAEKAPY AK+EKRK +Y KNM YNKKQAEG G
Sbjct: 76 VGKAAGAKWKQMSDAEKAPYVAKSEKRKQDYEKNMRAYNKKQAEGPTG 123
>tr|B9H5J0|B9H5J0_POPTR High mobility group family OS=Populus trichocarpa
GN=HMGB902 PE=4 SV=1
Length = 160
Score = 76 bits (186), Expect = 3e-012
Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Frame = +2
Query: 131 MKGGKSRA--AAPKRSDTK---LXXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFRE 295
MKGG+S++ + K S TK DPNKPKRPASAFFVFMEEFRE
Sbjct: 1 MKGGRSKSDTKSAKLSVTKKPTKGGGGGAAARKSGKAAKDPNKPKRPASAFFVFMEEFRE 60
Query: 296 KYKKEHPNNKSVAAVSES 349
+YK+EHP NKSVAAV ++
Sbjct: 61 QYKREHPKNKSVAAVGKA 78
Score = 74 bits (179), Expect = 2e-011
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKAGG+KWKSLS+AEKAP+ AKA+KRKVEY K M YNK+Q +G
Sbjct: 75 VGKAGGDKWKSLSEAEKAPFVAKADKRKVEYEKKMKAYNKEQLKG 119
>tr|Q2L6T4|Q2L6T4_ARATH Uncharacterized protein At1g20696.2 OS=Arabidopsis
thaliana GN=At1g20696 PE=4 SV=1
Length = 147
Score = 76 bits (186), Expect = 3e-012
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKK 563
VGKAGGEKWKSLSD+EKAPY AKA+KRKVEY KNM YNKK
Sbjct: 66 VGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKK 106
>tr|A8MQZ3|A8MQZ3_ARATH Uncharacterized protein At1g20693.3 OS=Arabidopsis
thaliana GN=At1g20693 PE=4 SV=1
Length = 143
Score = 75 bits (184), Expect = 5e-012
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKA G+KWKSLSD+EKAPY AKAEKRKVEY KN+ YNKK EG
Sbjct: 69 VGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113
>tr|O49596|O49596_ARATH HMG protein OS=Arabidopsis thaliana GN=HMGbeta1 PE=2
SV=1
Length = 144
Score = 75 bits (184), Expect = 5e-012
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKA G+KWKSLSD+EKAPY AKAEKRKVEY KN+ YNKK EG
Sbjct: 69 VGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113
>tr|Q2V4M2|Q2V4M2_ARATH Uncharacterized protein At1g20693.2 OS=Arabidopsis
thaliana GN=At1g20693 PE=4 SV=1
Length = 142
Score = 75 bits (184), Expect = 5e-012
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKA G+KWKSLSD+EKAPY AKAEKRKVEY KN+ YNKK EG
Sbjct: 69 VGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113
>tr|B4UW92|B4UW92_ARAHY High mobility group protein 1 OS=Arachis hypogaea PE=2
SV=1
Length = 139
Score = 75 bits (182), Expect = 9e-012
Identities = 36/65 (55%), Positives = 41/65 (63%)
Frame = +2
Query: 155 AAPKRSDTKLXXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVA 334
A K +D +L DPNKPKRP SAFFVFM EFRE+YKKEHPNNKSVA
Sbjct: 6 ADAKAADNRLKRKGAGTGRKQAKKAKDPNKPKRPPSAFFVFMSEFREQYKKEHPNNKSVA 65
Query: 335 AVSES 349
V ++
Sbjct: 66 VVGKA 70
Score = 72 bits (176), Expect = 4e-011
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQ 566
VGKAGG++WKS+SDA+KAPYQAKAEK+K EY + M YNKKQ
Sbjct: 67 VGKAGGDRWKSMSDADKAPYQAKAEKKKEEYERTMQAYNKKQ 108
>tr|Q41026|Q41026_PEA HMG 1 protein OS=Pisum sativum PE=2 SV=1
Length = 154
Score = 74 bits (181), Expect = 1e-011
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKA G KWKS+++AEKAPY AKAEKRK EY K+M YNKKQAEG
Sbjct: 76 VGKAAGAKWKSMTEAEKAPYAAKAEKRKAEYEKSMKSYNKKQAEG 120
>tr|Q1EMR5|Q1EMR5_PLAMJ HMG-protein (Fragment) OS=Plantago major GN=hmg1 PE=2
SV=1
Length = 212
Score = 74 bits (180), Expect = 1e-011
Identities = 37/52 (71%), Positives = 40/52 (76%), Gaps = 4/52 (7%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQA----EGDNG 584
VGKAGGEKWKSL+DAEKAPY+AKA KRK EY K M+ YNKKQ E D G
Sbjct: 130 VGKAGGEKWKSLTDAEKAPYEAKAAKRKSEYEKLMNAYNKKQESSADEADEG 181
>tr|B6TXE9|B6TXE9_MAIZE HMG1/2-like protein OS=Zea mays PE=2 SV=1
Length = 127
Score = 73 bits (178), Expect = 3e-011
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
+GKAGG+ WKSLSDAEKAPY +KAEK KVEY K MD YN KQ+ G
Sbjct: 59 IGKAGGDMWKSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQSGG 103
Database: UniProt/TrEMBL
Posted date: Sun May 10 14:41:50 2009
Number of letters in database: 2,506,224,640
Number of sequences in database: 7,695,149
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,832,537,585
Number of Sequences: 7695149
Number of Extensions: 131832537585
Number of Successful Extensions: 100465260
Number of sequences better than 0.0: 0
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