BLASTX 7.6.2
Query= RU06952 /QuerySize=950
(949 letters)
Database: UniProt/TrEMBL;
7,695,149 sequences; 2,506,224,640 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|B9SN80|B9SN80_RICCO Histone deacetylase 2a, putative OS=Ricin... 84 1e-014
tr|B8AXI7|B8AXI7_ORYSI Putative uncharacterized protein OS=Oryza... 79 6e-013
tr|Q0DFD6|Q0DFD6_ORYSJ Os05g0597100 protein OS=Oryza sativa subs... 79 6e-013
tr|Q5KQG2|Q5KQG2_ORYSJ Putative histone deacetylase HD2 OS=Oryza... 79 6e-013
tr|Q688F7|Q688F7_ORYSJ Putative histone deacetylase HD2 OS=Oryza... 79 6e-013
tr|Q9M4T5|Q9M4T5_ORYSA Putative histone deacetylase HD2 OS=Oryza... 79 6e-013
tr|B6SK06|B6SK06_MAIZE Histone deacetylase 2b OS=Zea mays PE=2 SV=1 69 5e-010
tr|B6TQC3|B6TQC3_MAIZE Histone deacetylase 2b OS=Zea mays PE=2 SV=1 69 5e-010
tr|Q3E700|Q3E700_ARATH Uncharacterized protein At5g22650.2 OS=Ar... 65 9e-009
tr|B4FHA8|B4FHA8_MAIZE Putative uncharacterized protein OS=Zea m... 60 2e-007
tr|Q0Z9W3|Q0Z9W3_WHEAT Histone deacetylase HDAC2 OS=Triticum aes... 58 8e-007
>tr|B9SN80|B9SN80_RICCO Histone deacetylase 2a, putative OS=Ricinus communis
GN=RCOM_1186440 PE=4 SV=1
Length = 310
Score = 84 bits (206), Expect = 1e-014
Identities = 51/94 (54%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Frame = +1
Query: 400 KRAQVSGSVKTPVSAKKAKIVASTPQKT-DGKKGGHTDTPHPAKKGKTPA---TDKSKTQ 567
K+ Q +VKTPVS+KKAK++ TPQKT DGKKGGHT TPHPAK K A T K +TQ
Sbjct: 219 KKRQNDSAVKTPVSSKKAKLI--TPQKTADGKKGGHTATPHPAKGAKASANGNTPKPQTQ 276
Query: 568 TPKSAXXXXXXXXXXXXXXXXXALQSHNKAKHSA 669
TPKS ALQSH+KAKHS+
Sbjct: 277 TPKSG-GKFSCNSCERSFGSDAALQSHSKAKHSS 309
Score = 60 bits (144), Expect = 2e-007
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Frame = +3
Query: 3 ELSHNWKSGSVHFAGYQSVMGXXXXXXXXXXXXXXXXXXLPMIAAENGKVENA--KPAIA 176
ELSHNWK+GSV+ +GYQ+ + LP++ A+NG ++ A + A A
Sbjct: 78 ELSHNWKNGSVYLSGYQTPL--PEEDDMFSEEESDDEEPLPLVNADNGGIQLAGTQKAAA 135
Query: 177 KSNAVKPESSGKQKVKIEEPIK 242
KSN KPESS KQK K +P K
Sbjct: 136 KSNIAKPESSTKQKAKPVQPSK 157
>tr|B8AXI7|B8AXI7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_21251 PE=4 SV=1
Length = 297
Score = 79 bits (192), Expect = 6e-013
Identities = 45/93 (48%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 394 TKKRAQVSGSVKTPVSAKKAKIVASTPQKTDGKKGGHTDTPHPAKK-GKTPATDKSKTQT 570
T KR +KTP S KKAKI + QKT KKG H TPHPAK+ KTP DKSK ++
Sbjct: 204 TGKRKVAEIVLKTPSSDKKAKIATPSGQKTGDKKGVHVATPHPAKQASKTPVNDKSKEKS 263
Query: 571 PKSAXXXXXXXXXXXXXXXXXALQSHNKAKHSA 669
PKS ALQSH+KAKH A
Sbjct: 264 PKSGGGSISCKSCSKTFNSEMALQSHSKAKHPA 296
>tr|Q0DFD6|Q0DFD6_ORYSJ Os05g0597100 protein OS=Oryza sativa subsp. japonica
GN=Os05g0597100 PE=2 SV=1
Length = 297
Score = 79 bits (192), Expect = 6e-013
Identities = 45/93 (48%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 394 TKKRAQVSGSVKTPVSAKKAKIVASTPQKTDGKKGGHTDTPHPAKK-GKTPATDKSKTQT 570
T KR +KTP S KKAKI + QKT KKG H TPHPAK+ KTP DKSK ++
Sbjct: 204 TGKRKVAEIVLKTPSSDKKAKIATPSGQKTGDKKGVHVATPHPAKQASKTPVNDKSKEKS 263
Query: 571 PKSAXXXXXXXXXXXXXXXXXALQSHNKAKHSA 669
PKS ALQSH+KAKH A
Sbjct: 264 PKSGGGSISCKSCSKTFNSEMALQSHSKAKHPA 296
>tr|Q5KQG2|Q5KQG2_ORYSJ Putative histone deacetylase HD2 OS=Oryza sativa subsp.
japonica GN=OSJNBb0086G17.13 PE=4 SV=1
Length = 274
Score = 79 bits (192), Expect = 6e-013
Identities = 45/93 (48%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 394 TKKRAQVSGSVKTPVSAKKAKIVASTPQKTDGKKGGHTDTPHPAKK-GKTPATDKSKTQT 570
T KR +KTP S KKAKI + QKT KKG H TPHPAK+ KTP DKSK ++
Sbjct: 181 TGKRKVAEIVLKTPSSDKKAKIATPSGQKTGDKKGVHVATPHPAKQASKTPVNDKSKEKS 240
Query: 571 PKSAXXXXXXXXXXXXXXXXXALQSHNKAKHSA 669
PKS ALQSH+KAKH A
Sbjct: 241 PKSGGGSISCKSCSKTFNSEMALQSHSKAKHPA 273
>tr|Q688F7|Q688F7_ORYSJ Putative histone deacetylase HD2 OS=Oryza sativa subsp.
japonica GN=OSJNBa0035I01.3 PE=4 SV=1
Length = 297
Score = 79 bits (192), Expect = 6e-013
Identities = 45/93 (48%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 394 TKKRAQVSGSVKTPVSAKKAKIVASTPQKTDGKKGGHTDTPHPAKK-GKTPATDKSKTQT 570
T KR +KTP S KKAKI + QKT KKG H TPHPAK+ KTP DKSK ++
Sbjct: 204 TGKRKVAEIVLKTPSSDKKAKIATPSGQKTGDKKGVHVATPHPAKQASKTPVNDKSKEKS 263
Query: 571 PKSAXXXXXXXXXXXXXXXXXALQSHNKAKHSA 669
PKS ALQSH+KAKH A
Sbjct: 264 PKSGGGSISCKSCSKTFNSEMALQSHSKAKHPA 296
>tr|Q9M4T5|Q9M4T5_ORYSA Putative histone deacetylase HD2 OS=Oryza sativa PE=2
SV=1
Length = 297
Score = 79 bits (192), Expect = 6e-013
Identities = 45/93 (48%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 394 TKKRAQVSGSVKTPVSAKKAKIVASTPQKTDGKKGGHTDTPHPAKK-GKTPATDKSKTQT 570
T KR +KTP S KKAKI + QKT KKG H TPHPAK+ KTP DKSK ++
Sbjct: 204 TGKRKVAEIVLKTPSSDKKAKIATPSGQKTGDKKGVHVATPHPAKQASKTPVNDKSKEKS 263
Query: 571 PKSAXXXXXXXXXXXXXXXXXALQSHNKAKHSA 669
PKS ALQSH+KAKH A
Sbjct: 264 PKSGGGSISCKSCSKTFNSEMALQSHSKAKHPA 296
>tr|B6SK06|B6SK06_MAIZE Histone deacetylase 2b OS=Zea mays PE=2 SV=1
Length = 300
Score = 69 bits (167), Expect = 5e-010
Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = +1
Query: 397 KKRAQVSGSVKTPVSAKKAKIVASTPQKTDGKKGG--HTDTPHPAKKGKTPATDKSKTQT 570
KKRA S +KTP+S KKAK+ + QKT GKKG H TPHPA KGKT + ++
Sbjct: 207 KKRAAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPA-KGKTIVNNDKSVKS 265
Query: 571 PKSA-XXXXXXXXXXXXXXXXXALQSHNKAKH 663
PKSA ALQ+H+KAKH
Sbjct: 266 PKSAPKSGVPCKSCSKSFISETALQAHSKAKH 297
>tr|B6TQC3|B6TQC3_MAIZE Histone deacetylase 2b OS=Zea mays PE=2 SV=1
Length = 304
Score = 69 bits (167), Expect = 5e-010
Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = +1
Query: 397 KKRAQVSGSVKTPVSAKKAKIVASTPQKTDGKKGG--HTDTPHPAKKGKTPATDKSKTQT 570
KKRA S +KTP+S KKAK+ + QKT GKKG H TPHPA KGKT + ++
Sbjct: 211 KKRAAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPA-KGKTIVNNDKSVKS 269
Query: 571 PKSA-XXXXXXXXXXXXXXXXXALQSHNKAKH 663
PKSA ALQ+H+KAKH
Sbjct: 270 PKSAPKSGVPCKSCSKSFISQTALQAHSKAKH 301
>tr|Q3E700|Q3E700_ARATH Uncharacterized protein At5g22650.2 OS=Arabidopsis
thaliana GN=At5g22650 PE=4 SV=2
Length = 305
Score = 65 bits (156), Expect = 9e-009
Identities = 41/65 (63%), Positives = 45/65 (69%), Gaps = 8/65 (12%)
Frame = +1
Query: 397 KKRAQVSGSVKTPVSAKKAK---IVASTPQKTDGKKGGHTDTPHPAKK-GKTPATDKSKT 564
KKR S S KTPVS KKAK ASTPQKT+ KKGGHT TPHPAKK GK+P +
Sbjct: 208 KKRPNESVS-KTPVSGKKAKPAAAPASTPQKTEKKKGGHTATPHPAKKGGKSPV---NAN 263
Query: 565 QTPKS 579
Q+PKS
Sbjct: 264 QSPKS 268
>tr|B4FHA8|B4FHA8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 303
Score = 60 bits (145), Expect = 2e-007
Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Frame = +1
Query: 400 KRAQVSGSVKTPVSAKKAKIVASTPQKTDGKKGG-HTDTPHPAKKGKTPA-TDKSKTQTP 573
K+ ++KTP+S KKAK+ QKT GKKG H TPHPA KGKTPA DKS ++P
Sbjct: 213 KKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPA-KGKTPANNDKSTEKSP 271
Query: 574 KS 579
KS
Sbjct: 272 KS 273
>tr|Q0Z9W3|Q0Z9W3_WHEAT Histone deacetylase HDAC2 OS=Triticum aestivum PE=2
SV=1
Length = 310
Score = 58 bits (139), Expect = 8e-007
Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 8/64 (12%)
Frame = +1
Query: 397 KKRAQVSGSV-KTPVSAKKAKIVASTPQKTDGKKGG-HTDTPHPAKK-GKTPATDKSKTQ 567
KKRA +GSV KTPV+ KKAKI + QKT KKG H TPHPAKK GKTPAT + +
Sbjct: 222 KKRA--AGSVLKTPVTDKKAKIATPSGQKTGDKKGAVHVATPHPAKKAGKTPATSE---K 276
Query: 568 TPKS 579
+PKS
Sbjct: 277 SPKS 280
Database: UniProt/TrEMBL
Posted date: Sun May 10 14:41:50 2009
Number of letters in database: 2,506,224,640
Number of sequences in database: 7,695,149
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 188,374,749,283
Number of Sequences: 7695149
Number of Extensions: 188374749283
Number of Successful Extensions: 154024039
Number of sequences better than 0.0: 0
|