BLASTX 7.6.2
Query= RU20048 /QuerySize=884
(883 letters)
Database: UniProt/TrEMBL;
7,695,149 sequences; 2,506,224,640 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|B9I4C9|B9I4C9_POPTR Predicted protein OS=Populus trichocarpa ... 221 7e-056
tr|B9ID35|B9ID35_POPTR Predicted protein OS=Populus trichocarpa ... 221 7e-056
tr|A7PJQ3|A7PJQ3_VITVI Chromosome chr12 scaffold_18, whole genom... 211 7e-053
tr|A2Q3E0|A2Q3E0_MEDTR DNA-directed RNA polymerase, 14 to 18 kDa... 209 3e-052
tr|B7FHE6|B7FHE6_MEDTR Putative uncharacterized protein OS=Medic... 207 1e-051
tr|B9R9F9|B9R9F9_RICCO DNA-directed RNA polymerase subunit rpb6,... 206 3e-051
tr|Q9SJ96|Q9SJ96_ARATH At2g04630 OS=Arabidopsis thaliana GN=At2g... 205 4e-051
tr|Q9FJ98|Q9FJ98_ARATH DNA-directed RNA polymerase II subunit-li... 203 1e-050
tr|A7QVJ8|A7QVJ8_VITVI Chromosome chr16 scaffold_189, whole geno... 203 2e-050
tr|A2YL15|A2YL15_ORYSI Putative uncharacterized protein OS=Oryza... 201 5e-050
tr|Q8LI69|Q8LI69_ORYSJ Os07g0463100 protein OS=Oryza sativa subs... 201 5e-050
tr|Q6F2V1|Q6F2V1_ORYSJ Os03g0586600 protein OS=Oryza sativa subs... 201 7e-050
tr|A2XIZ2|A2XIZ2_ORYSI Putative uncharacterized protein OS=Oryza... 200 2e-049
tr|B6TJG4|B6TJG4_MAIZE DNA-directed RNA polymerases I, II, and I... 200 2e-049
tr|Q9S7Q6|Q9S7Q6_TOBAC DNA-directed RNA polymerase IIa OS=Nicoti... 200 2e-049
tr|B4FLZ6|B4FLZ6_MAIZE Putative uncharacterized protein OS=Zea m... 199 3e-049
tr|B6SI57|B6SI57_MAIZE DNA-directed RNA polymerases I, II, and I... 199 4e-049
tr|B6T8K1|B6T8K1_MAIZE DNA-directed RNA polymerases I, II, and I... 196 2e-048
tr|A5AKW7|A5AKW7_VITVI Putative uncharacterized protein OS=Vitis... 195 4e-048
tr|A9NU56|A9NU56_PICSI Putative uncharacterized protein OS=Picea... 193 2e-047
tr|C0PQI2|C0PQI2_PICSI Putative uncharacterized protein OS=Picea... 192 4e-047
tr|A3BJH6|A3BJH6_ORYSJ Putative uncharacterized protein OS=Oryza... 189 3e-046
tr|A9TB02|A9TB02_PHYPA Predicted protein (Fragment) OS=Physcomit... 176 3e-042
tr|B7PRL4|B7PRL4_IXOSC RNA polymerase subunit K, putative OS=Ixo... 136 4e-030
tr|Q59QT0|Q59QT0_CANAL Potential subunit common to RNA polymeras... 134 8e-030
tr|A3LVF6|A3LVF6_PICST Subunit common to RNA polymerases I, II, ... 133 2e-029
tr|B9WHP7|B9WHP7_CANDC RNA polymerase subunit common to RNA poly... 133 2e-029
tr|A5DQ74|A5DQ74_PICGU Putative uncharacterized protein OS=Pichi... 132 3e-029
tr|A4RSJ5|A4RSJ5_OSTLU Predicted protein (Fragment) OS=Ostreococ... 132 4e-029
tr|B8C3F5|B8C3F5_THAPS Dna-directed RNA polymerase i (Fragment) ... 132 4e-029
>tr|B9I4C9|B9I4C9_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_814294 PE=4 SV=1
Length = 143
Score = 221 bits (562), Expect = 7e-056
Identities = 111/143 (77%), Positives = 120/143 (83%), Gaps = 2/143 (1%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXX--XXXXXXXXXXXXXXDNNDDLAGDAIETDDKEEQVPVERPRKT 508
MAD+DYN++D+GY DNN+D G+ IET+DKEEQ PVERPRKT
Sbjct: 1 MADEDYNDVDMGYEDEPPEPEIEEGVEEDADNDNNEDDKGEPIETEDKEEQEPVERPRKT 60
Query: 507 SKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 328
SKFMTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 61 SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 120
Query: 327 SYEDWGVDELIVEDSWKRQVGGN 259
SYEDWGVDELIVEDSWKRQVGG+
Sbjct: 121 SYEDWGVDELIVEDSWKRQVGGD 143
>tr|B9ID35|B9ID35_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_824910 PE=4 SV=1
Length = 143
Score = 221 bits (562), Expect = 7e-056
Identities = 110/143 (76%), Positives = 120/143 (83%), Gaps = 2/143 (1%)
Frame = -2
Query: 681 MADDDYNEMDIGYXX--XXXXXXXXXXXXXXXDNNDDLAGDAIETDDKEEQVPVERPRKT 508
MADD+YN++D+GY +NN+D G+ IET+DKEEQ PVERPRKT
Sbjct: 1 MADDEYNDVDMGYEDEPAEPEIEEGADEDAENNNNEDDTGEPIETEDKEEQAPVERPRKT 60
Query: 507 SKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 328
SKFMTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 61 SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 120
Query: 327 SYEDWGVDELIVEDSWKRQVGGN 259
SYEDWGVDELIVEDSWKRQVGG+
Sbjct: 121 SYEDWGVDELIVEDSWKRQVGGD 143
>tr|A7PJQ3|A7PJQ3_VITVI Chromosome chr12 scaffold_18, whole genome shotgun
sequence OS=Vitis vinifera GN=GSVIVT00018833001 PE=4 SV=1
Length = 141
Score = 211 bits (536), Expect = 7e-053
Identities = 110/142 (77%), Positives = 118/142 (83%), Gaps = 2/142 (1%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXXXXXXXXXXXXXXXXD-NNDDLAGDAIETDDKEEQVPVERPRKTS 505
MADDDYN+MD+GY D NN++ DAIET +K EQVPVER RKTS
Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEDADNNNNEDIPDAIETAEK-EQVPVERSRKTS 59
Query: 504 KFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 325
K+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS
Sbjct: 60 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 119
Query: 324 YEDWGVDELIVEDSWKRQVGGN 259
YEDWGVDELIVEDSWKRQVGG+
Sbjct: 120 YEDWGVDELIVEDSWKRQVGGD 141
>tr|A2Q3E0|A2Q3E0_MEDTR DNA-directed RNA polymerase, 14 to 18 kDa subunit
OS=Medicago truncatula GN=MtrDRAFT_AC155881g13v1 PE=4 SV=1
Length = 145
Score = 209 bits (530), Expect = 3e-052
Identities = 106/145 (73%), Positives = 118/145 (81%), Gaps = 4/145 (2%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXX--XXXXXXXXXXXXXXDNNDDL--AGDAIETDDKEEQVPVERPR 514
MADDDY ++D+GY + NDDL G+ IET++KE+ PVERPR
Sbjct: 1 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDNKNDDLDAEGEPIETEEKEDAAPVERPR 60
Query: 513 KTSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 334
+TSK+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 61 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 120
Query: 333 DGSYEDWGVDELIVEDSWKRQVGGN 259
DGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 121 DGSYEDWGVDELIVEDSWKRQVGGD 145
>tr|B7FHE6|B7FHE6_MEDTR Putative uncharacterized protein OS=Medicago truncatula
PE=2 SV=1
Length = 145
Score = 207 bits (525), Expect = 1e-051
Identities = 105/145 (72%), Positives = 117/145 (80%), Gaps = 4/145 (2%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXX--XXXXXXXXXXXXXXDNNDDL--AGDAIETDDKEEQVPVERPR 514
MADDDY ++D+GY + NDDL G+ IET++KE+ PVERPR
Sbjct: 1 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDNKNDDLDAEGEPIETEEKEDVAPVERPR 60
Query: 513 KTSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 334
+TSK+MTKYERARI GTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 61 RTSKYMTKYERARIFGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 120
Query: 333 DGSYEDWGVDELIVEDSWKRQVGGN 259
DGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 121 DGSYEDWGVDELIVEDSWKRQVGGD 145
>tr|B9R9F9|B9R9F9_RICCO DNA-directed RNA polymerase subunit rpb6, putative
OS=Ricinus communis GN=RCOM_1496830 PE=4 SV=1
Length = 124
Score = 206 bits (522), Expect = 3e-051
Identities = 99/111 (89%), Positives = 106/111 (95%)
Frame = -2
Query: 591 DNNDDLAGDAIETDDKEEQVPVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVELEG 412
+NN+D+ GD IET+DKEEQ ERPRKTSK+MTKYERARILGTRA+QISMNAPVMVELEG
Sbjct: 14 NNNEDVPGDPIETEDKEEQEAAERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 73
Query: 411 ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 259
ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 74 ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 124
>tr|Q9SJ96|Q9SJ96_ARATH At2g04630 OS=Arabidopsis thaliana GN=At2g04630 PE=2
SV=1
Length = 144
Score = 205 bits (521), Expect = 4e-051
Identities = 106/144 (73%), Positives = 116/144 (80%), Gaps = 3/144 (2%)
Frame = -2
Query: 681 MADDDYNEM-DIGYXXXXXXXXXXXXXXXXXD--NNDDLAGDAIETDDKEEQVPVERPRK 511
MADDDYNE+ D+GY D NDD+ D +ET+DK E PV+RPRK
Sbjct: 1 MADDDYNEVDDLGYEDEPAEPEIEEGVEEDADIKENDDVNVDPLETEDKVETEPVQRPRK 60
Query: 510 TSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 331
TSKFMTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPD
Sbjct: 61 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPD 120
Query: 330 GSYEDWGVDELIVEDSWKRQVGGN 259
SYE+WGVDELIVEDSWKRQVGG+
Sbjct: 121 MSYEEWGVDELIVEDSWKRQVGGD 144
>tr|Q9FJ98|Q9FJ98_ARATH DNA-directed RNA polymerase II subunit-like protein
OS=Arabidopsis thaliana GN=At5g51940 PE=2 SV=1
Length = 144
Score = 203 bits (516), Expect = 1e-050
Identities = 103/144 (71%), Positives = 117/144 (81%), Gaps = 3/144 (2%)
Frame = -2
Query: 681 MADDDYNEM-DIGYXXXXXXXXXXXXXXXXXD--NNDDLAGDAIETDDKEEQVPVERPRK 511
MAD+DYN++ D+GY + NDD+ G+ IE +DK E PV+RPRK
Sbjct: 1 MADEDYNDVDDLGYEDEPAEPEIEEGVEEDVEMKENDDVNGEPIEAEDKVETEPVQRPRK 60
Query: 510 TSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 331
TSKFMTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPD
Sbjct: 61 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPD 120
Query: 330 GSYEDWGVDELIVEDSWKRQVGGN 259
GS+E+WGVDELIVEDSWKRQVGG+
Sbjct: 121 GSFEEWGVDELIVEDSWKRQVGGD 144
>tr|A7QVJ8|A7QVJ8_VITVI Chromosome chr16 scaffold_189, whole genome shotgun
sequence OS=Vitis vinifera GN=GSVIVT00007392001 PE=4 SV=1
Length = 142
Score = 203 bits (514), Expect = 2e-050
Identities = 102/142 (71%), Positives = 115/142 (80%), Gaps = 1/142 (0%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXX-XXXXXXXXXXXXXXDNNDDLAGDAIETDDKEEQVPVERPRKTS 505
MAD++YN++D+GY +NN++ DA+E +KE VERPRKTS
Sbjct: 1 MADEEYNDVDMGYEDEPPEPEIEEGAEEEAENNNNEDVPDALEEQEKEVHETVERPRKTS 60
Query: 504 KFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 325
K+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS
Sbjct: 61 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 120
Query: 324 YEDWGVDELIVEDSWKRQVGGN 259
YEDWGVDELIVEDSWKRQVGG+
Sbjct: 121 YEDWGVDELIVEDSWKRQVGGD 142
>tr|A2YL15|A2YL15_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_25904 PE=4 SV=1
Length = 142
Score = 201 bits (511), Expect = 5e-050
Identities = 101/141 (71%), Positives = 111/141 (78%), Gaps = 1/141 (0%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXX-XXXXXXXXXXXXXXDNNDDLAGDAIETDDKEEQVPVERPRKTS 505
MA+DDYN+MD+GY +NN+D D + +D +EQ RPRKTS
Sbjct: 1 MAEDDYNDMDMGYEDEPPEPEIEEGAEEEPENNNEDAVDDVVGAEDDKEQEKTARPRKTS 60
Query: 504 KFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 325
K+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDGS
Sbjct: 61 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDGS 120
Query: 324 YEDWGVDELIVEDSWKRQVGG 262
YEDWGVDELIVEDSWKRQVGG
Sbjct: 121 YEDWGVDELIVEDSWKRQVGG 141
>tr|Q8LI69|Q8LI69_ORYSJ Os07g0463100 protein OS=Oryza sativa subsp. japonica
GN=OJ1634_H04.114 PE=2 SV=1
Length = 142
Score = 201 bits (511), Expect = 5e-050
Identities = 101/141 (71%), Positives = 111/141 (78%), Gaps = 1/141 (0%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXX-XXXXXXXXXXXXXXDNNDDLAGDAIETDDKEEQVPVERPRKTS 505
MA+DDYN+MD+GY +NN+D D + +D +EQ RPRKTS
Sbjct: 1 MAEDDYNDMDMGYEDEPPEPEIEEGAEEEPENNNEDAVDDVVGAEDDKEQEKTARPRKTS 60
Query: 504 KFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 325
K+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDGS
Sbjct: 61 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDGS 120
Query: 324 YEDWGVDELIVEDSWKRQVGG 262
YEDWGVDELIVEDSWKRQVGG
Sbjct: 121 YEDWGVDELIVEDSWKRQVGG 141
>tr|Q6F2V1|Q6F2V1_ORYSJ Os03g0586600 protein OS=Oryza sativa subsp. japonica
GN=OSJNBa0010D22.24 PE=2 SV=1
Length = 142
Score = 201 bits (510), Expect = 7e-050
Identities = 102/142 (71%), Positives = 114/142 (80%), Gaps = 3/142 (2%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXXXXXXXXXXXXXXXXDNNDDLAGDAI--ETDDKEEQVPVERPRKT 508
MADDDYN+MD+GY +NN+D + + E +DKE++ +RPRKT
Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNEDGPDEVVGAEAEDKEQE-KTQRPRKT 59
Query: 507 SKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 328
SK+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 60 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119
Query: 327 SYEDWGVDELIVEDSWKRQVGG 262
SYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGG 141
>tr|A2XIZ2|A2XIZ2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_12404 PE=4 SV=1
Length = 143
Score = 200 bits (507), Expect = 2e-049
Identities = 102/143 (71%), Positives = 114/143 (79%), Gaps = 4/143 (2%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXXXXXXXXXXXXXXXXDNNDDLAGDAI---ETDDKEEQVPVERPRK 511
MADDDYN+MD+GY +NN++ D + E +DKE++ +RPRK
Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNNEDGPDEVVGAEAEDKEQE-KTQRPRK 59
Query: 510 TSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 331
TSK+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 60 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 119
Query: 330 GSYEDWGVDELIVEDSWKRQVGG 262
GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGG 142
>tr|B6TJG4|B6TJG4_MAIZE DNA-directed RNA polymerases I, II, and III 14.4 kDa
polypeptide OS=Zea mays PE=2 SV=1
Length = 142
Score = 200 bits (506), Expect = 2e-049
Identities = 102/143 (71%), Positives = 114/143 (79%), Gaps = 3/143 (2%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXXXXXXXXXXXXXXXXDNNDDLAGDAI--ETDDKEEQVPVERPRKT 508
MADDDYNE+D+GY +NN+D D I E +DKE++ +R RKT
Sbjct: 1 MADDDYNEIDMGYEDELPEPEIEEGAEEELENNEDAPDDVIGGEGEDKEQE-KTKRERKT 59
Query: 507 SKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 328
+K+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119
Query: 327 SYEDWGVDELIVEDSWKRQVGGN 259
SYEDWGVDELIVEDSWKRQVGG+
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142
>tr|Q9S7Q6|Q9S7Q6_TOBAC DNA-directed RNA polymerase IIa OS=Nicotiana tabacum
GN=NT193 PE=2 SV=1
Length = 143
Score = 200 bits (506), Expect = 2e-049
Identities = 106/143 (74%), Positives = 114/143 (79%), Gaps = 4/143 (2%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXXXXXXXXXXXXXXXXD--NNDDLAGDAI-ETDDKEEQVPVERPRK 511
MADDDY +MD GY D NN+D+ + E ++K EQ PVERPRK
Sbjct: 1 MADDDY-DMDGGYVDEPIEPEPDEGAEIEEDNGNNEDIPDPLLGEGEEKTEQEPVERPRK 59
Query: 510 TSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 331
TSK+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 60 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 119
Query: 330 GSYEDWGVDELIVEDSWKRQVGG 262
GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGG 142
>tr|B4FLZ6|B4FLZ6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 142
Score = 199 bits (505), Expect = 3e-049
Identities = 102/143 (71%), Positives = 114/143 (79%), Gaps = 3/143 (2%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXXXXXXXXXXXXXXXXDNNDDLAGDAI--ETDDKEEQVPVERPRKT 508
MADDDYNE+D+GY +NN+D D I E +DKE++ +R RKT
Sbjct: 1 MADDDYNEIDMGYEDEPPEPEIEEGAEEELENNEDAPDDVIGGEGEDKEQE-KTKRERKT 59
Query: 507 SKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 328
+K+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119
Query: 327 SYEDWGVDELIVEDSWKRQVGGN 259
SYEDWGVDELIVEDSWKRQVGG+
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142
>tr|B6SI57|B6SI57_MAIZE DNA-directed RNA polymerases I, II, and III 14.4 kDa
polypeptide OS=Zea mays PE=2 SV=1
Length = 142
Score = 199 bits (504), Expect = 4e-049
Identities = 102/143 (71%), Positives = 114/143 (79%), Gaps = 3/143 (2%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXXXXXXXXXXXXXXXXDNNDDLAGDAI--ETDDKEEQVPVERPRKT 508
MADDDYNE+D+GY +NN+D D I E +DKE++ +R RKT
Sbjct: 1 MADDDYNEIDMGYEDEPPEPEIEEGAEEEPENNEDAPDDVIGGEGEDKEQE-KTKRERKT 59
Query: 507 SKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 328
+K+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119
Query: 327 SYEDWGVDELIVEDSWKRQVGGN 259
SYEDWGVDELIVEDSWKRQVGG+
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142
>tr|B6T8K1|B6T8K1_MAIZE DNA-directed RNA polymerases I, II, and III 14.4 kDa
polypeptide OS=Zea mays PE=2 SV=1
Length = 142
Score = 196 bits (497), Expect = 2e-048
Identities = 101/143 (70%), Positives = 113/143 (79%), Gaps = 3/143 (2%)
Frame = -2
Query: 681 MADDDYNEMDIGYXXXXXXXXXXXXXXXXXDNNDDLAGDAI--ETDDKEEQVPVERPRKT 508
MA DDYNE+D+GY +NN+D D I E +DKE++ +R RKT
Sbjct: 1 MAXDDYNEIDMGYEDEPPEPEIEEGAEEEPENNEDAPDDVIGGEGEDKEQE-KTKRERKT 59
Query: 507 SKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 328
+K+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119
Query: 327 SYEDWGVDELIVEDSWKRQVGGN 259
SYEDWGVDELIVEDSWKRQVGG+
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142
>tr|A5AKW7|A5AKW7_VITVI Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_000776 PE=4 SV=1
Length = 140
Score = 195 bits (495), Expect = 4e-048
Identities = 99/111 (89%), Positives = 106/111 (95%), Gaps = 2/111 (1%)
Frame = -2
Query: 591 DNNDDLAGDAIETDDKEEQVPVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVELEG 412
+NN+D+ DAIET +K EQVPVER RKTSK+MTKYERARILGTRA+QISMNAPVMVELEG
Sbjct: 32 NNNEDIP-DAIETAEK-EQVPVERSRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 89
Query: 411 ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 259
ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 90 ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 140
>tr|A9NU56|A9NU56_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 147
Score = 193 bits (489), Expect = 2e-047
Identities = 99/147 (67%), Positives = 114/147 (77%), Gaps = 6/147 (4%)
Frame = -2
Query: 681 MADDDYNEM---DIGYXXXXXXXXXXXXXXXXXDNNDDLAGDAIETDDK---EEQVPVER 520
MAD+DYN+ D+GY + ++++ D + DK E+Q P ++
Sbjct: 1 MADEDYNDFDGGDVGYEEEPPEPEIEEEVAPEEEEHEEVPVDTLGGGDKEPVEQQRPSDK 60
Query: 519 PRKTSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY 340
PRKTSKFMTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY
Sbjct: 61 PRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY 120
Query: 339 LPDGSYEDWGVDELIVEDSWKRQVGGN 259
LPDGSYEDWGVDELIVEDSW+RQVGG+
Sbjct: 121 LPDGSYEDWGVDELIVEDSWRRQVGGD 147
>tr|C0PQI2|C0PQI2_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 147
Score = 192 bits (486), Expect = 4e-047
Identities = 99/147 (67%), Positives = 113/147 (76%), Gaps = 6/147 (4%)
Frame = -2
Query: 681 MADDDYNEM---DIGYXXXXXXXXXXXXXXXXXDNNDDLAGDAIETDDK---EEQVPVER 520
MAD+DYN+ D+GY + ++++ D + DK E+Q P ++
Sbjct: 1 MADEDYNDFDGGDVGYEEEPPEPEIEEEVAPEEEEHEEVPVDTLGGGDKEPVEQQRPSDK 60
Query: 519 PRKTSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY 340
PRKTSKFMTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY
Sbjct: 61 PRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY 120
Query: 339 LPDGSYEDWGVDELIVEDSWKRQVGGN 259
LPDGSYEDWGVDELIVEDSW RQVGG+
Sbjct: 121 LPDGSYEDWGVDELIVEDSWTRQVGGD 147
>tr|A3BJH6|A3BJH6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_24153 PE=4 SV=1
Length = 177
Score = 189 bits (479), Expect = 3e-046
Identities = 91/110 (82%), Positives = 98/110 (89%)
Frame = -2
Query: 591 DNNDDLAGDAIETDDKEEQVPVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVELEG 412
+NN+D D + +D +EQ RPRKTSK+MTKYERARILGTRA+QISMNAPVMVELEG
Sbjct: 67 NNNEDAVDDVVGAEDDKEQEKTARPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 126
Query: 411 ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 262
ETDPLEIAMKELR RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 127 ETDPLEIAMKELRARKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 176
>tr|A9TB02|A9TB02_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_142855 PE=4 SV=1
Length = 119
Score = 176 bits (444), Expect = 3e-042
Identities = 86/111 (77%), Positives = 98/111 (88%), Gaps = 2/111 (1%)
Frame = -2
Query: 591 DNNDDLAGDAIETDDKEE--QVPVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVEL 418
+N+D D +ETD + +V ++PRKT+K+MTKYERAR+LGTRA+QISMNAPVMV L
Sbjct: 9 ENDDARDFDGLETDTLVDGAEVRTDKPRKTTKYMTKYERARVLGTRALQISMNAPVMVNL 68
Query: 417 EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 265
EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSW+RQVG
Sbjct: 69 EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWRRQVG 119
>tr|B7PRL4|B7PRL4_IXOSC RNA polymerase subunit K, putative OS=Ixodes scapularis
GN=IscW_ISCW007471 PE=4 SV=1
Length = 129
Score = 136 bits (340), Expect = 4e-030
Identities = 67/102 (65%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Frame = -2
Query: 591 DNNDDLAGDAIETDDKEEQVPVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVELEG 412
D NDD + ++ D + Q + R T+ +MTKYERAR+LGTRA+QI+M APVMVELEG
Sbjct: 30 DQNDDENIELLQASDGQPQ--QNQKRITTMYMTKYERARVLGTRALQIAMCAPVMVELEG 87
Query: 411 ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 286
ETDPL+IAMKEL+ RKIP IRRYLPDGSYEDWG+DELI+ D
Sbjct: 88 ETDPLQIAMKELKARKIPIIIRRYLPDGSYEDWGIDELIITD 129
>tr|Q59QT0|Q59QT0_CANAL Potential subunit common to RNA polymerase I, II and III
OS=Candida albicans GN=RPO26 PE=4 SV=1
Length = 157
Score = 134 bits (337), Expect = 8e-030
Identities = 66/95 (69%), Positives = 79/95 (83%), Gaps = 1/95 (1%)
Frame = -2
Query: 573 AGDAIETDDKEEQVPVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLE 394
AG + KE +P E+ R T+ +MTKYERARILGTRA+QIS+NAPV+V++EGETDPL+
Sbjct: 63 AGQPRKKTTKELAIPKEK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGETDPLQ 121
Query: 393 IAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 289
IAMKEL +RKIP IRRYLPDGSYEDWG DELIV+
Sbjct: 122 IAMKELAQRKIPLVIRRYLPDGSYEDWGCDELIVD 156
>tr|A3LVF6|A3LVF6_PICST Subunit common to RNA polymerases I, II, and III
OS=Pichia stipitis GN=RPO26 PE=4 SV=1
Length = 157
Score = 133 bits (333), Expect = 2e-029
Identities = 65/99 (65%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
Frame = -2
Query: 585 NDDLAGDAIETDDKEEQVPVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVELEGET 406
+D A + KE +P E+ R T+ +MTKYERAR+LGTRA+QIS+NAPV+V++EGET
Sbjct: 59 DDASANQPRQKTAKELAIPKEK-RTTTPYMTKYERARVLGTRALQISLNAPVLVDIEGET 117
Query: 405 DPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 289
DPL+IAMKEL +RKIP IRRYLPDGSYEDWG DELIV+
Sbjct: 118 DPLQIAMKELAQRKIPLVIRRYLPDGSYEDWGCDELIVD 156
>tr|B9WHP7|B9WHP7_CANDC RNA polymerase subunit common to RNA polymerases I, II,
and III, putative OS=Candida dubliniensis (strain CD36 / CBS 7987 /
NCPF 3949 / NRRL Y-17841) GN=CD36_53140 PE=4 SV=1
Length = 157
Score = 133 bits (333), Expect = 2e-029
Identities = 64/86 (74%), Positives = 76/86 (88%), Gaps = 1/86 (1%)
Frame = -2
Query: 546 KEEQVPVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRER 367
KE +P E+ R T+ +MTKYERARILGTRA+QIS+NAPV+V++EGETDPL+IAMKEL +R
Sbjct: 72 KELAIPKEK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGETDPLQIAMKELAQR 130
Query: 366 KIPFTIRRYLPDGSYEDWGVDELIVE 289
KIP IRRYLPDGSYEDWG DELIV+
Sbjct: 131 KIPLVIRRYLPDGSYEDWGCDELIVD 156
>tr|A5DQ74|A5DQ74_PICGU Putative uncharacterized protein OS=Pichia
guilliermondii GN=PGUG_05425 PE=4 SV=1
Length = 158
Score = 132 bits (332), Expect = 3e-029
Identities = 62/86 (72%), Positives = 76/86 (88%), Gaps = 1/86 (1%)
Frame = -2
Query: 546 KEEQVPVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRER 367
KE +P E+ R T+ +MTKYERARILGTRA+QIS+NAPV+V++EGETDPL+IAMKEL +R
Sbjct: 73 KELSIPKEK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGETDPLQIAMKELTQR 131
Query: 366 KIPFTIRRYLPDGSYEDWGVDELIVE 289
K+P +RRYLPDGSYEDWG DELIV+
Sbjct: 132 KVPLVVRRYLPDGSYEDWGCDELIVD 157
>tr|A4RSJ5|A4RSJ5_OSTLU Predicted protein (Fragment) OS=Ostreococcus lucimarinus
(strain CCE9901) GN=OSTLU_8797 PE=4 SV=1
Length = 81
Score = 132 bits (331), Expect = 4e-029
Identities = 60/75 (80%), Positives = 71/75 (94%)
Frame = -2
Query: 516 RKTSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 337
R T+ +MTKYERARILGTRA+QISMNAPV+V+LEGETDPLEIA KELRE+++PF +RRY+
Sbjct: 7 RTTTPYMTKYERARILGTRALQISMNAPVLVQLEGETDPLEIAGKELREKRVPFVVRRYM 66
Query: 336 PDGSYEDWGVDELIV 292
PDGSYEDWG+DELIV
Sbjct: 67 PDGSYEDWGIDELIV 81
>tr|B8C3F5|B8C3F5_THAPS Dna-directed RNA polymerase i (Fragment)
OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_262598 PE=4 SV=1
Length = 76
Score = 132 bits (331), Expect = 4e-029
Identities = 61/76 (80%), Positives = 72/76 (94%)
Frame = -2
Query: 516 RKTSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 337
R T++++TKYERAR+LGTRA+QISMNAPVMV+LEGETDPL+IA KELRERKIP IRRYL
Sbjct: 1 RITTRYLTKYERARVLGTRALQISMNAPVMVDLEGETDPLKIAQKELRERKIPIVIRRYL 60
Query: 336 PDGSYEDWGVDELIVE 289
PDGS+EDWG+DELIV+
Sbjct: 61 PDGSHEDWGIDELIVD 76
Database: UniProt/TrEMBL
Posted date: Sun May 10 14:41:50 2009
Number of letters in database: 2,506,224,640
Number of sequences in database: 7,695,149
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 339,730,742,528
Number of Sequences: 7695149
Number of Extensions: 339730742528
Number of Successful Extensions: 256423204
Number of sequences better than 0.0: 0
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