BLASTX 7.6.2
Query= RU21019 /QuerySize=208
(207 letters)
Database: UniProt/TrEMBL;
7,695,149 sequences; 2,506,224,640 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|B9H2M1|B9H2M1_POPTR Glutamate-gated kainate-type ion channel ... 58 2e-007
tr|B9I1P7|B9I1P7_POPTR Glutamate-gated kainate-type ion channel ... 55 1e-006
tr|B9N9N2|B9N9N2_POPTR Glutamate-gated kainate-type ion channel ... 55 1e-006
>tr|B9H2M1|B9H2M1_POPTR Glutamate-gated kainate-type ion channel receptor
subunit GluR5 OS=Populus trichocarpa GN=POPTRDRAFT_758817 PE=4 SV=1
Length = 942
Score = 58 bits (139), Expect = 2e-007
Identities = 25/48 (52%), Positives = 38/48 (79%)
Frame = -3
Query: 205 KMRKLVTNVGAIVNLYSRMGKEQKTAMDVAAENFNIHSKTHSIILHFR 62
+ KLVTN+GAI+++ SR+GKE+KTA+++A ++FN S H + LHFR
Sbjct: 50 RTNKLVTNIGAIIDVNSRIGKEEKTALELAVQDFNDISTNHELSLHFR 97
>tr|B9I1P7|B9I1P7_POPTR Glutamate-gated kainate-type ion channel receptor
subunit GluR5 OS=Populus trichocarpa GN=POPTRDRAFT_568753 PE=4 SV=1
Length = 838
Score = 55 bits (132), Expect = 1e-006
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = -3
Query: 190 VTNVGAIVNLYSRMGKEQKTAMDVAAENFNIHSKTHSIILHFR 62
VTN+GAI++ SR GKE+KTAM++A +NFN S+ H + LHF+
Sbjct: 55 VTNIGAIIDGNSRSGKEEKTAMEIAVQNFNNISRNHKLSLHFK 97
>tr|B9N9N2|B9N9N2_POPTR Glutamate-gated kainate-type ion channel receptor
subunit GluR5 OS=Populus trichocarpa GN=POPTRDRAFT_786926 PE=4 SV=1
Length = 407
Score = 55 bits (132), Expect = 1e-006
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = -3
Query: 190 VTNVGAIVNLYSRMGKEQKTAMDVAAENFNIHSKTHSIILHFR 62
VTN+GAI++ SR GKE+KTAM++A +NFN S+ H + LHF+
Sbjct: 55 VTNIGAIIDGNSRTGKEEKTAMEIAVQNFNNISRNHKLSLHFK 97
Database: UniProt/TrEMBL
Posted date: Sun May 10 14:41:50 2009
Number of letters in database: 2,506,224,640
Number of sequences in database: 7,695,149
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 344,827,939,568
Number of Sequences: 7695149
Number of Extensions: 344827939568
Number of Successful Extensions: 265040416
Number of sequences better than 0.0: 0
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