BLASTX 7.6.2
Query= RU23008 /QuerySize=862
(861 letters)
Database: UniProt/TrEMBL;
7,695,149 sequences; 2,506,224,640 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|A7PAM9|A7PAM9_VITVI Chromosome chr14 scaffold_9, whole genome... 158 7e-037
tr|A5BTD9|A5BTD9_VITVI Putative uncharacterized protein OS=Vitis... 148 9e-034
tr|B9N1Z9|B9N1Z9_POPTR Predicted protein OS=Populus trichocarpa ... 132 3e-029
tr|B9SJ00|B9SJ00_RICCO DNA double-strand break repair rad50 ATPa... 106 2e-021
tr|A6BME3|A6BME3_PETCR Nuclear matrix constituent protein 1-like... 75 7e-012
tr|O04390|O04390_DAUCA Nuclear matrix constituent protein 1 OS=D... 74 2e-011
tr|A6BME2|A6BME2_FOEVU Nuclear matrix constituent protein 1-like... 69 4e-010
tr|A6BME0|A6BME0_APIGR Nuclear matrix constituent protein 1-like... 69 5e-010
tr|A6BME1|A6BME1_CORSA Nuclear matrix constituent protein 1-like... 67 1e-009
tr|Q8GZ88|Q8GZ88_ARATH Putative uncharacterized protein At1g6723... 64 1e-008
tr|Q9FYH0|Q9FYH0_ARATH F1N21.5 OS=Arabidopsis thaliana PE=1 SV=1 64 1e-008
tr|A5BQE9|A5BQE9_VITVI Putative uncharacterized protein OS=Vitis... 60 2e-007
tr|A7P315|A7P315_VITVI Chromosome chr1 scaffold_5, whole genome ... 56 3e-006
>tr|A7PAM9|A7PAM9_VITVI Chromosome chr14 scaffold_9, whole genome shotgun
sequence OS=Vitis vinifera GN=GSVIVT00038186001 PE=4 SV=1
Length = 1167
Score = 158 bits (398), Expect = 7e-037
Identities = 109/256 (42%), Positives = 135/256 (52%), Gaps = 8/256 (3%)
Frame = +3
Query: 9 EVDAGQYPSADEH--ISEAPNVLKDSQPTNLXXXXXXXXXXXXATVNRTRSVKAVVKDAK 182
EV+AGQ S DE S+A + + SQ ++L ++RTRSVKAVV+DAK
Sbjct: 883 EVEAGQDLSIDESNIDSKALELQQHSQHSDLKGARRKPGKRSKQRIHRTRSVKAVVRDAK 942
Query: 183 AILGEAFETNDGQYQNGTAEDSANMYTESHDDSSLAXXXXXXXXXXXXXAQTSQVAVSEH 362
AILGE+ E ++ ++ NG EDSA+M ES +SS A A TSQ VSE
Sbjct: 943 AILGESLELSENEHPNGNPEDSAHMNDESRGESSFADKGTPRNGRKRQRAYTSQTMVSEQ 1002
Query: 363 GGDDSE-RSDSVMTGQRKKRREKVPAAEQPPNERRYNLRRSXXXXXXXXXXXSHDLVKQN 539
GDDSE RSDSVM ++ KRR+KVP A Q + RYNLRR S +L K+
Sbjct: 1003 DGDDSEGRSDSVMARRQGKRRQKVPPAVQTLGQERYNLRRPKTTVTVAAAKSSTNLHKRK 1062
Query: 540 E-EVD--SARDTEAEILYSKAAPATSTGFAGENGGSTHFVRCXXXXXXXXXXXXXVKNSA 710
E E D A T EI AAPATS G ENGGSTH ++ K
Sbjct: 1063 ETETDGSGAGGTGEEIPDCNAAPATSVGLISENGGSTHVLQLEAAEDTQDDNADVTKELV 1122
Query: 711 ENMAVSEGV--VPQKG 752
ENMA+SE V P +G
Sbjct: 1123 ENMALSEEVNETPDEG 1138
>tr|A5BTD9|A5BTD9_VITVI Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_008657 PE=4 SV=1
Length = 1140
Score = 148 bits (371), Expect = 9e-034
Identities = 99/221 (44%), Positives = 123/221 (55%), Gaps = 6/221 (2%)
Frame = +3
Query: 9 EVDAGQYPSADEH--ISEAPNVLKDSQPTNLXXXXXXXXXXXXATVNRTRSVKAVVKDAK 182
EV+AGQ S DE S+A + + SQ ++L ++RTRSVKAVV+DAK
Sbjct: 876 EVEAGQDLSIDESNIDSKALELQQHSQHSDLKGARRKPGKRSKQRIHRTRSVKAVVRDAK 935
Query: 183 AILGEAFETNDGQYQNGTAEDSANMYTESHDDSSLAXXXXXXXXXXXXXAQTSQVAVSEH 362
AILGE+ E ++ ++ NG EDSA+M ES +SS A A TSQ VSE
Sbjct: 936 AILGESLELSENEHPNGNPEDSAHMNDESRGESSFADKGTPRNGRKRQRAYTSQTMVSEQ 995
Query: 363 GGDDSE-RSDSVMTGQRKKRREKVPAAEQPPNERRYNLRRSXXXXXXXXXXXSHDLVKQN 539
GDDSE RSDSVM ++ KRR+KVP A Q + RYNLRR S +L K+
Sbjct: 996 DGDDSEGRSDSVMARRQGKRRQKVPPAVQTLGQERYNLRRPKNTVTVAAAKSSTNLHKRK 1055
Query: 540 E-EVD--SARDTEAEILYSKAAPATSTGFAGENGGSTHFVR 653
E E D A T EI AAPATS G ENGGSTH ++
Sbjct: 1056 ETETDGSGAGGTGEEIPDCNAAPATSVGLISENGGSTHVLQ 1096
>tr|B9N1Z9|B9N1Z9_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_827801 PE=4 SV=1
Length = 1156
Score = 132 bits (332), Expect = 3e-029
Identities = 94/249 (37%), Positives = 126/249 (50%), Gaps = 14/249 (5%)
Frame = +3
Query: 3 IREVDAGQYPSADEHISE---APNVLKDSQPTNLXXXXXXXXXXXXATVNRTRSVKAVVK 173
IREV+AG S ++ + AP + +DSQP+ L V+RTRSVK VV+
Sbjct: 883 IREVEAGHDLSINDQSNNNGTAPEIQEDSQPSGL-KHDPQPRKRGRPRVSRTRSVKEVVQ 941
Query: 174 DAKAILGEAFETNDGQYQNGTAEDSANMYTESHDDSSLAXXXXXXXXXXXXXAQTSQVAV 353
DAKA+LG A E N+ AEDS ++ +ES D+SSLA QTSQ++V
Sbjct: 942 DAKALLGGALELNE-------AEDSGHLKSESRDESSLADKGGPRNARKRNRTQTSQISV 994
Query: 354 SEHGGDDSE-RSDSVMTGQRKKRREKVPAAEQPPNERRYNLRRSXXXXXXXXXXXSHDLV 530
S+ GDDSE SDSV G R+KRR+KV Q + +YNLRR S +L
Sbjct: 995 SDRYGDDSEGHSDSVTAGDRRKRRQKV-VPNQTQGQTQYNLRRRELGVAVVTVKASSNLN 1053
Query: 531 KQNEEVDSARDTEAEILYSKAAPATSTGFAGENGGSTHFVRCXXXXXXXXXXXXXVKNSA 710
+ E+ D + + ++APA S G A ENG S HF RC +
Sbjct: 1054 NEKEKEDDGVSSPQDGNLLRSAPAASAGAASENGESMHFARC-ANIMDTLDGDGSARRMD 1112
Query: 711 ENMAVSEGV 737
EN A+SE +
Sbjct: 1113 ENAALSEEI 1121
>tr|B9SJ00|B9SJ00_RICCO DNA double-strand break repair rad50 ATPase, putative
OS=Ricinus communis GN=RCOM_0597440 PE=4 SV=1
Length = 1163
Score = 106 bits (264), Expect = 2e-021
Identities = 91/259 (35%), Positives = 125/259 (48%), Gaps = 37/259 (14%)
Frame = +3
Query: 3 IREVDAGQYPSADEHI---SEAPNVLKDSQPTNLXXXXXXXXXXXXATVNRTRSVKAVVK 173
IRE +A Q S D+ +EA V + +QP+N+ V+RTRS+KAVV+
Sbjct: 886 IREAEAVQDFSIDDKSNINNEAIQVPEGTQPSNV-KLGRQIHKRGRPRVSRTRSMKAVVQ 944
Query: 174 DAKAILGEAFETNDGQYQNGTAEDSANMYTESHDDSSLAXXXXXXXXXXXXXAQTSQVAV 353
DAKAILGE+ E N EDS+++ ES +S+LA + SQ V
Sbjct: 945 DAKAILGESLELNT------ETEDSSHLKAESRGESNLADEKISRNARKRKSTRASQNTV 998
Query: 354 SEHG---GDDSE-RSDSVMTGQRKKRREKVPAAEQPPNERRYNLRRSXXXXXXXXXXXSH 521
SEHG GD+SE SDS+ G+R+KR++KV A Q P E+RYNLRR
Sbjct: 999 SEHGDGDGDESEGHSDSITAGKRRKRQQKV-AIVQTPGEKRYNLRRPKKGAKPLS----- 1052
Query: 522 DLVKQNEEVDSARDTEAEILYSKAAPATSTGFAGENGGSTHFVRCXXXXXXXXXXXXXVK 701
D+ ++++E R TSTG A ENGG+ F + +
Sbjct: 1053 DIGREDKEEGGVRG------------PTSTGIASENGGNARFEQ---LEVVSDTDADSTR 1097
Query: 702 NSAENMAVSEGV--VPQKG 752
N E A+SE V P +G
Sbjct: 1098 NLVEYAALSEEVNGTPDEG 1116
>tr|A6BME3|A6BME3_PETCR Nuclear matrix constituent protein 1-like
OS=Petroselinum crispum GN=NMCP1-like PE=4 SV=1
Length = 1119
Score = 75 bits (182), Expect = 7e-012
Identities = 58/171 (33%), Positives = 73/171 (42%), Gaps = 6/171 (3%)
Frame = +3
Query: 69 LKDSQPTNLXXXXXXXXXXXXATVNRTRSVKAVVKDAKAILGEAFETNDGQYQNGTAEDS 248
++DSQ +++ V R RS K V ++AK +L + E N+ ++ NG A
Sbjct: 848 VEDSQQSDVRAGNRKPGKRAKGRVRRKRSAKEVAEEAKTVLADPIELNENEHSNGLASAY 907
Query: 249 ANMYTESHDDSSLAXXXXXXXXXXXXXAQTSQVAVSEHGGDDSERSDSVMTGQRKKRREK 428
N ES DSSL +Q SQ A E G D SDSV G R+KRR K
Sbjct: 908 TN---ESRGDSSLV-GKRTRNSRKRNPSQPSQSAAGEVGADSEGHSDSVTAGGRQKRRRK 963
Query: 429 VPAAEQPPNERRYNLRRSXXXXXXXXXXXSHDLVKQNE-EVDSARDTEAEI 578
V A Q P RYNLRR D K E E+D EI
Sbjct: 964 VVPAVQAPT-GRYNLRRHKTAAPLVANGALSDPNKGKEKEIDDGGGIGEEI 1013
>tr|O04390|O04390_DAUCA Nuclear matrix constituent protein 1 OS=Daucus carota
GN=NMCP1 PE=2 SV=1
Length = 1119
Score = 74 bits (179), Expect = 2e-011
Identities = 57/171 (33%), Positives = 73/171 (42%), Gaps = 6/171 (3%)
Frame = +3
Query: 69 LKDSQPTNLXXXXXXXXXXXXATVNRTRSVKAVVKDAKAILGEAFETNDGQYQNGTAEDS 248
++DSQ +++ V R RS K V ++AK +L + E N+ ++ NG A
Sbjct: 848 VEDSQQSDVRAGNRKPGKRAKGRVRRKRSAKEVAEEAKTVLADPIELNENEHSNGLASAY 907
Query: 249 ANMYTESHDDSSLAXXXXXXXXXXXXXAQTSQVAVSEHGGDDSERSDSVMTGQRKKRREK 428
N ES DSSL +Q SQ A + G D SDSV G R+KRR K
Sbjct: 908 TN---ESRGDSSLV-GKRTRNSRKRNPSQPSQSAAGDVGADSEGHSDSVTAGGRQKRRRK 963
Query: 429 VPAAEQPPNERRYNLRRSXXXXXXXXXXXSHDLVKQNE-EVDSARDTEAEI 578
V A Q P RYNLRR D K E E+D EI
Sbjct: 964 VVPAVQAPT-GRYNLRRHKTAAPLVANGALSDPNKGKEKEIDDGGGIGEEI 1013
>tr|A6BME2|A6BME2_FOEVU Nuclear matrix constituent protein 1-like OS=Foeniculum
vulgare GN=NMCP1-like PE=4 SV=1
Length = 1119
Score = 69 bits (167), Expect = 4e-010
Identities = 55/171 (32%), Positives = 72/171 (42%), Gaps = 6/171 (3%)
Frame = +3
Query: 69 LKDSQPTNLXXXXXXXXXXXXATVNRTRSVKAVVKDAKAILGEAFETNDGQYQNGTAEDS 248
++DSQ +++ V R RS K V ++AK +L + E N+ ++ NG A
Sbjct: 848 VEDSQQSDVRAGNRKPGKRAKGRVRRKRSAKEVAEEAKTVLADPIELNENEHSNGLASAY 907
Query: 249 ANMYTESHDDSSLAXXXXXXXXXXXXXAQTSQVAVSEHGGDDSERSDSVMTGQRKKRREK 428
N ES DSSL +Q SQ A + G + SDSV G +KRR K
Sbjct: 908 TN---ESRGDSSLV-GKRTRNSRKRNPSQPSQSAAGDVGANSEGHSDSVTAGGPQKRRRK 963
Query: 429 VPAAEQPPNERRYNLRRSXXXXXXXXXXXSHDLVKQNE-EVDSARDTEAEI 578
V A Q P RYNLRR D K E E+D EI
Sbjct: 964 VVPAVQAPT-GRYNLRRHKTAAPLVANGALSDPNKGKEKEIDDGGGIGEEI 1013
>tr|A6BME0|A6BME0_APIGR Nuclear matrix constituent protein 1-like OS=Apium
graveolens GN=NMCP1-like PE=4 SV=1
Length = 1119
Score = 69 bits (166), Expect = 5e-010
Identities = 55/171 (32%), Positives = 71/171 (41%), Gaps = 6/171 (3%)
Frame = +3
Query: 69 LKDSQPTNLXXXXXXXXXXXXATVNRTRSVKAVVKDAKAILGEAFETNDGQYQNGTAEDS 248
++DSQ +++ V R RS K V ++AK +L + E N+ ++ NG A
Sbjct: 848 VEDSQQSDVRAGNRKPGKRAKGRVRRKRSAKEVAEEAKTVLADPIELNENEHSNGLASAY 907
Query: 249 ANMYTESHDDSSLAXXXXXXXXXXXXXAQTSQVAVSEHGGDDSERSDSVMTGQRKKRREK 428
N ES DSSL +Q Q A + G D SDSV G +KRR K
Sbjct: 908 TN---ESRGDSSLV-GKRTRNSRKRNPSQPFQSAAGDVGADSEGHSDSVTAGGPQKRRRK 963
Query: 429 VPAAEQPPNERRYNLRRSXXXXXXXXXXXSHDLVKQNE-EVDSARDTEAEI 578
V A Q P RYNLRR D K E E+D EI
Sbjct: 964 VVPAVQAPT-GRYNLRRHKTAAPLVANGALSDPNKGKEKEIDDGGGIGEEI 1013
>tr|A6BME1|A6BME1_CORSA Nuclear matrix constituent protein 1-like OS=Coriandrum
sativum GN=NMCP1-like PE=4 SV=1
Length = 1003
Score = 67 bits (163), Expect = 1e-009
Identities = 48/137 (35%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Frame = +3
Query: 69 LKDSQPTNLXXXXXXXXXXXXATVNRTRSVKAVVKDAKAILGEAFETNDGQYQNGTAEDS 248
++DSQ +++ V R RS K V ++AK +L + E N+ ++ NG A
Sbjct: 848 VEDSQQSDVRAGNRKPGKRAKGRVRRKRSAKEVAEEAKTVLADPIELNENEHSNGLASAY 907
Query: 249 ANMYTESHDDSSLAXXXXXXXXXXXXXAQTSQVAVSEHGGDDSERSDSVMTGQRKKRREK 428
N ES DSSL +Q SQ A + G D SDSV G +KRR K
Sbjct: 908 TN---ESRGDSSLV-GKRTRNSRKRNPSQPSQSAAGDVGADSEGHSDSVTAGGPQKRRRK 963
Query: 429 VPAAEQPPNERRYNLRR 479
V A Q RYNLRR
Sbjct: 964 VVPAVQ-ARTGRYNLRR 979
>tr|Q8GZ88|Q8GZ88_ARATH Putative uncharacterized protein At1g67230/F1N21_5
OS=Arabidopsis thaliana GN=At1g67230/F1N21_5 PE=2 SV=1
Length = 471
Score = 64 bits (155), Expect = 1e-008
Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Frame = +3
Query: 132 ATVNRTRSVKAVVKDAKAILGEAFETNDGQYQNGTAEDSANMYTESHDDSSLAXXXXXXX 311
A RTRSVK VV DAKA+ GE+ + +DS T S A
Sbjct: 240 ARTRRTRSVKDVVDDAKALYGESINLYEPNDSTENVDDSTKASTGETGRSDKAISKNGRK 299
Query: 312 XXXXXXAQTSQVAVSEHGGDDSE-RSDSVMTG-QRKKRREKVPAAEQ-PPNERRYNLRRS 482
+T +E G++S+ +SDSV G ++KRR+KV + +Q +RYNLRR
Sbjct: 300 RGRVGSLRT---CTTEQDGNESDGKSDSVTGGAHQRKRRQKVASEQQGEVVGQRYNLRRP 356
Query: 483 XXXXXXXXXXXSHDLVKQNEEVDSARDTEAEILYSKAAPATSTGFA-GENGGSTHFVRCX 659
L K+NE++ + E I ++A S G A +NG ST+ V+
Sbjct: 357 RRVTGEPA------LSKKNEDIGGVQQEEG-IHCTQATATASVGVAVSDNGVSTNVVQHE 409
Query: 660 XXXXXXXXXXXXVKNSAENMAVSEGV 737
K + E+ A+SE V
Sbjct: 410 ATADSEDTDAGSPKRTDESEAMSEDV 435
>tr|Q9FYH0|Q9FYH0_ARATH F1N21.5 OS=Arabidopsis thaliana PE=1 SV=1
Length = 1166
Score = 64 bits (155), Expect = 1e-008
Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Frame = +3
Query: 132 ATVNRTRSVKAVVKDAKAILGEAFETNDGQYQNGTAEDSANMYTESHDDSSLAXXXXXXX 311
A RTRSVK VV DAKA+ GE+ + +DS T S A
Sbjct: 935 ARTRRTRSVKDVVDDAKALYGESINLYEPNDSTENVDDSTKASTGETGRSDKAISKNGRK 994
Query: 312 XXXXXXAQTSQVAVSEHGGDDSE-RSDSVMTG-QRKKRREKVPAAEQ-PPNERRYNLRRS 482
+T +E G++S+ +SDSV G ++KRR+KV + +Q +RYNLRR
Sbjct: 995 RGRVGSLRT---CTTEQDGNESDGKSDSVTGGAHQRKRRQKVASEQQGEVVGQRYNLRRP 1051
Query: 483 XXXXXXXXXXXSHDLVKQNEEVDSARDTEAEILYSKAAPATSTGFA-GENGGSTHFVRCX 659
L K+NE++ + E I ++A S G A +NG ST+ V+
Sbjct: 1052 RRVTGEPA------LSKKNEDIGGVQQEEG-IHCTQATATASVGVAVSDNGVSTNVVQHE 1104
Query: 660 XXXXXXXXXXXXVKNSAENMAVSEGV 737
K + E+ A+SE V
Sbjct: 1105 ATADSEDTDAGSPKRTDESEAMSEDV 1130
>tr|A5BQE9|A5BQE9_VITVI Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_038920 PE=4 SV=1
Length = 1234
Score = 60 bits (143), Expect = 2e-007
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Frame = +3
Query: 228 NGTAEDSANMYT--ESHDDSSLAXXXXXXXXXXXXXAQTSQVAVSEHGGDDSE-RSDSVM 398
NG + + YT E ++S A A +S++ SE DSE RSDSV
Sbjct: 996 NGDERPNDSTYTNEEGERETSHAEKAASTITRKRQRAPSSRITESEQDAADSEGRSDSVT 1055
Query: 399 TGQRKKRREKVPAAEQPPNERRYNLRRSXXXXXXXXXXXSHDLVKQNEEVDSARDTEAEI 578
G R KRR+ V Q P E+RYNLRR S +L K++E+ D
Sbjct: 1056 AGGRGKRRQTVAPVVQTPGEKRYNLRRHKTAGTVATAQASANLPKRDEKGGDGGDDNT-- 1113
Query: 579 LYSKAAP--ATSTGFAGENGGST 641
L +KA P A+S A + T
Sbjct: 1114 LQTKANPKAASSPSLADSDNPKT 1136
>tr|A7P315|A7P315_VITVI Chromosome chr1 scaffold_5, whole genome shotgun
sequence OS=Vitis vinifera GN=GSVIVT00030268001 PE=4 SV=1
Length = 1091
Score = 56 bits (134), Expect = 3e-006
Identities = 47/149 (31%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Frame = +3
Query: 204 ETNDGQYQNGTAEDSANMYTESHDDSSLAXXXXXXXXXXXXXAQTSQVAVSEHGGDDSE- 380
E G+ + G + T S ++S A A +S++ SE DSE
Sbjct: 906 ELKSGRRKPGRKRRTGVHRTRSR-ETSHAEKAASTITRKRQRAPSSRITESEQDAADSEG 964
Query: 381 RSDSVMTGQRKKRREKVPAAEQPPNERRYNLRRSXXXXXXXXXXXSHDLVKQNEEVDSAR 560
RSDSV G R KRR+ V Q P E+RYNLRR S +L K++E+
Sbjct: 965 RSDSVTAGGRGKRRQTVAPVVQTPGEKRYNLRRHKTAGTVATAQASANLPKRDEKGGDGG 1024
Query: 561 DTEAEILYSKAAP--ATSTGFAGENGGST 641
D L +KA P A+S A + T
Sbjct: 1025 DDNT--LQTKANPKAASSPSLADSDNPKT 1051
Database: UniProt/TrEMBL
Posted date: Sun May 10 14:41:50 2009
Number of letters in database: 2,506,224,640
Number of sequences in database: 7,695,149
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 370,194,511,655
Number of Sequences: 7695149
Number of Extensions: 370194511655
Number of Successful Extensions: 308276786
Number of sequences better than 0.0: 0
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