BLASTX 7.6.2
Query= RU23524 /QuerySize=765
(764 letters)
Database: UniProt/TrEMBL;
7,695,149 sequences; 2,506,224,640 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|A5CA52|A5CA52_VITVI Chromosome chr9 scaffold_7, whole genome ... 200 1e-049
tr|B9T3A8|B9T3A8_RICCO Lsm1, putative OS=Ricinus communis GN=RCO... 196 2e-048
tr|B9GVZ1|B9GVZ1_POPTR Predicted protein OS=Populus trichocarpa ... 195 4e-048
tr|A9PK74|A9PK74_POPJC Putative uncharacterized protein OS=Popul... 194 7e-048
tr|B9N7F0|B9N7F0_POPTR Predicted protein OS=Populus trichocarpa ... 194 7e-048
tr|Q8LFL8|Q8LFL8_ARATH Putative Sm protein OS=Arabidopsis thalia... 193 2e-047
tr|B9RR81|B9RR81_RICCO Lsm1, putative OS=Ricinus communis GN=RCO... 181 6e-044
tr|A9NQ94|A9NQ94_PICSI Putative uncharacterized protein OS=Picea... 177 9e-043
tr|B8AUC9|B8AUC9_ORYSI Putative uncharacterized protein OS=Oryza... 174 7e-042
tr|Q0JCW8|Q0JCW8_ORYSJ Os04g0445800 protein OS=Oryza sativa subs... 174 7e-042
tr|B6SII9|B6SII9_MAIZE Small nuclear ribonucleoprotein LSM1 OS=Z... 172 4e-041
tr|Q01J34|Q01J34_ORYSA OSIGBa0140O07.9 protein OS=Oryza sativa G... 167 9e-040
tr|Q7XUX0|Q7XUX0_ORYSJ OSJNBa0027P08.15 protein OS=Oryza sativa ... 167 9e-040
tr|Q945P8|Q945P8_ARATH At1g19120/F14D16_26 OS=Arabidopsis thalia... 167 9e-040
tr|B6SHP8|B6SHP8_MAIZE Small nuclear ribonucleoprotein LSM1 OS=Z... 167 1e-039
tr|Q8LEW7|Q8LEW7_ARATH Putative uncharacterized protein OS=Arabi... 166 2e-039
tr|A7PDU1|A7PDU1_VITVI Chromosome chr11 scaffold_13, whole genom... 165 3e-039
tr|Q9LJI0|Q9LJI0_ARATH Genomic DNA, chromosome 3, P1 clone: MAG2... 165 3e-039
tr|A9S414|A9S414_PHYPA Predicted protein OS=Physcomitrella paten... 158 7e-037
tr|B8A1F5|B8A1F5_MAIZE Putative uncharacterized protein OS=Zea m... 154 8e-036
tr|A9SZM3|A9SZM3_PHYPA Predicted protein OS=Physcomitrella paten... 151 7e-035
tr|B6SKB6|B6SKB6_MAIZE Small nuclear ribonucleoprotein LSM1 OS=Z... 142 3e-032
tr|A8IVB1|A8IVB1_CHLRE Sm protein LSm1 OS=Chlamydomonas reinhard... 106 2e-021
tr|Q9LMB5|Q9LMB5_ARATH F14D16.28 OS=Arabidopsis thaliana PE=4 SV=1 98 5e-019
tr|A4S5K5|A4S5K5_OSTLU Predicted protein OS=Ostreococcus lucimar... 92 3e-017
tr|B6HH27|B6HH27_PENCW Pc20g13900 protein OS=Penicillium chrysog... 77 9e-013
tr|A1DH91|A1DH91_NEOFI Small nuclear ribonucleoprotein (LSM1), p... 75 3e-012
tr|B0XSK8|B0XSK8_ASPFC Small nuclear ribonucleoprotein (LSM1), p... 75 6e-012
tr|Q4X0Z1|Q4X0Z1_ASPFU Small nuclear ribonucleoprotein (LSM1), p... 75 6e-012
>tr|A5CA52|A5CA52_VITVI Chromosome chr9 scaffold_7, whole genome shotgun
sequence OS=Vitis vinifera GN=GSVIVT00034053001 PE=4 SV=1
Length = 128
Score = 200 bits (507), Expect = 1e-049
Identities = 101/128 (78%), Positives = 106/128 (82%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSWAGPED+YLSTSLASY SFDQFANAVLEGACERVIVG+L
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+PLGLYVIRGENVVLIGELD E+EELPPHMTRVS AEIKRAQKAEREASDLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120
Query: 240 RMEFLDMD 217
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>tr|B9T3A8|B9T3A8_RICCO Lsm1, putative OS=Ricinus communis GN=RCOM_0392140 PE=4
SV=1
Length = 128
Score = 196 bits (497), Expect = 2e-048
Identities = 97/128 (75%), Positives = 106/128 (82%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSWAGPED+YLSTSLASY SFDQFANAVLEGACERVIVG+L
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+PLGLY+IRGENVVLIGELD E+EELPPHMTRVS AEI+RAQKAER+A+DLKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120
Query: 240 RMEFLDMD 217
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>tr|B9GVZ1|B9GVZ1_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_830650 PE=4 SV=1
Length = 128
Score = 195 bits (494), Expect = 4e-048
Identities = 99/128 (77%), Positives = 104/128 (81%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSWAGPED+YLSTSLASY SFDQFANAVLEGACER IVG+L
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDL 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+ LGLYVIRGENVVLIGELD EREELPPHMTRVS AEIKRAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRK 120
Query: 240 RMEFLDMD 217
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>tr|A9PK74|A9PK74_POPJC Putative uncharacterized protein OS=Populus jackii PE=2
SV=1
Length = 128
Score = 194 bits (492), Expect = 7e-048
Identities = 98/128 (76%), Positives = 105/128 (82%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSWAGPED+YLSTSLA+Y SFDQFANAVLEGACERVIVG+L
Sbjct: 1 MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+ LGLYVIRGENVVLIGELD EREELPPHMTRVS AEI+RAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120
Query: 240 RMEFLDMD 217
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>tr|B9N7F0|B9N7F0_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_745826 PE=4 SV=1
Length = 128
Score = 194 bits (492), Expect = 7e-048
Identities = 98/128 (76%), Positives = 105/128 (82%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSWAGPED+YLSTSLA+Y SFDQFANAVLEGACERVIVG+L
Sbjct: 1 MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+ LGLYVIRGENVVLIGELD EREELPPHMTRVS AEI+RAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120
Query: 240 RMEFLDMD 217
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>tr|Q8LFL8|Q8LFL8_ARATH Putative Sm protein OS=Arabidopsis thaliana GN=At3g14080
PE=2 SV=1
Length = 128
Score = 193 bits (488), Expect = 2e-047
Identities = 97/128 (75%), Positives = 103/128 (80%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSWAGPE++YLSTSLASY SFDQFANAVLEGACERVIVGE
Sbjct: 1 MSWAGPEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+PLGLYVIRGENVVLIGELD+EREELPPHM RVS AEIKRAQK EREAS+L+GTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDTEREELPPHMIRVSEAEIKRAQKVEREASELRGTMRK 120
Query: 240 RMEFLDMD 217
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>tr|B9RR81|B9RR81_RICCO Lsm1, putative OS=Ricinus communis GN=RCOM_0711050 PE=4
SV=1
Length = 128
Score = 181 bits (458), Expect = 6e-044
Identities = 92/128 (71%), Positives = 101/128 (78%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSWAGP+D++LSTSLA+Y SFDQFAN VLEGACERVIVG+L
Sbjct: 1 MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDL 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+ LGLYVIRGENVVLIGELD E+EELP HMT VS AEIKRAQKAEREA+DLKG+MRK
Sbjct: 61 YCDILLGLYVIRGENVVLIGELDLEKEELPSHMTCVSEAEIKRAQKAEREATDLKGSMRK 120
Query: 240 RMEFLDMD 217
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>tr|A9NQ94|A9NQ94_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 172
Score = 177 bits (448), Expect = 9e-043
Identities = 90/128 (70%), Positives = 100/128 (78%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSWAGPED++LSTSLASY SFDQFANAVLE A ER+IVG+L
Sbjct: 45 MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLIGILRSFDQFANAVLENALERIIVGDL 104
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCDLPLGLYVIRGENVVLIGELD EREELP +M VS EIKRAQKAER+A+DLKG+MRK
Sbjct: 105 YCDLPLGLYVIRGENVVLIGELDPEREELPANMIHVSATEIKRAQKAERDATDLKGSMRK 164
Query: 240 RMEFLDMD 217
RMEFLD++
Sbjct: 165 RMEFLDLE 172
>tr|B8AUC9|B8AUC9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_16058 PE=4 SV=1
Length = 129
Score = 174 bits (440), Expect = 7e-042
Identities = 86/127 (67%), Positives = 99/127 (77%)
Frame = -3
Query: 597 SWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGELY 418
SWAGP++++LSTSLA + SFDQFAN VL+GACERVIVGELY
Sbjct: 3 SWAGPDEIFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELY 62
Query: 417 CDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRKR 238
CD+PLGLYVIRGENVVLIGELD E++ELP HMT VS AEI++A+KAEREA DLKG+MRKR
Sbjct: 63 CDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGSMRKR 122
Query: 237 MEFLDMD 217
MEFLD D
Sbjct: 123 MEFLDFD 129
>tr|Q0JCW8|Q0JCW8_ORYSJ Os04g0445800 protein OS=Oryza sativa subsp. japonica
GN=Os04g0445800 PE=4 SV=1
Length = 129
Score = 174 bits (440), Expect = 7e-042
Identities = 86/127 (67%), Positives = 99/127 (77%)
Frame = -3
Query: 597 SWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGELY 418
SWAGP++++LSTSLA + SFDQFAN VL+GACERVIVGELY
Sbjct: 3 SWAGPDEIFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELY 62
Query: 417 CDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRKR 238
CD+PLGLYVIRGENVVLIGELD E++ELP HMT VS AEI++A+KAEREA DLKG+MRKR
Sbjct: 63 CDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGSMRKR 122
Query: 237 MEFLDMD 217
MEFLD D
Sbjct: 123 MEFLDFD 129
>tr|B6SII9|B6SII9_MAIZE Small nuclear ribonucleoprotein LSM1 OS=Zea mays PE=2
SV=1
Length = 128
Score = 172 bits (434), Expect = 4e-041
Identities = 86/128 (67%), Positives = 97/128 (75%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSW+ P+D+ LSTSLA + SFDQFAN VL+GACERVIVGE
Sbjct: 1 MSWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQ 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+PLGLYVIRGENVVLIGELD E++ELP HMT VS AEI++A+KAEREA DLKGTMRK
Sbjct: 61 YCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGTMRK 120
Query: 240 RMEFLDMD 217
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>tr|Q01J34|Q01J34_ORYSA OSIGBa0140O07.9 protein OS=Oryza sativa
GN=OSIGBa0140O07.9 PE=4 SV=1
Length = 136
Score = 167 bits (422), Expect = 9e-040
Identities = 86/134 (64%), Positives = 99/134 (73%), Gaps = 7/134 (5%)
Frame = -3
Query: 597 SWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGELY 418
SWAGP++++LSTSLA + SFDQFAN VL+GACERVIVGELY
Sbjct: 3 SWAGPDEIFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELY 62
Query: 417 CDLPLGLYVIRGENVVLIGEL-------DSEREELPPHMTRVSPAEIKRAQKAEREASDL 259
CD+PLGLYVIRGENVVLIGEL D E++ELP HMT VS AEI++A+KAEREA DL
Sbjct: 63 CDVPLGLYVIRGENVVLIGELVWFWIEQDREKDELPAHMTCVSEAEIRKAEKAEREARDL 122
Query: 258 KGTMRKRMEFLDMD 217
KG+MRKRMEFLD D
Sbjct: 123 KGSMRKRMEFLDFD 136
>tr|Q7XUX0|Q7XUX0_ORYSJ OSJNBa0027P08.15 protein OS=Oryza sativa subsp. japonica
GN=OSJNBa0027P08.15 PE=4 SV=2
Length = 136
Score = 167 bits (422), Expect = 9e-040
Identities = 86/134 (64%), Positives = 99/134 (73%), Gaps = 7/134 (5%)
Frame = -3
Query: 597 SWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGELY 418
SWAGP++++LSTSLA + SFDQFAN VL+GACERVIVGELY
Sbjct: 3 SWAGPDEIFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELY 62
Query: 417 CDLPLGLYVIRGENVVLIGEL-------DSEREELPPHMTRVSPAEIKRAQKAEREASDL 259
CD+PLGLYVIRGENVVLIGEL D E++ELP HMT VS AEI++A+KAEREA DL
Sbjct: 63 CDVPLGLYVIRGENVVLIGELVWFWIEQDREKDELPAHMTCVSEAEIRKAEKAEREARDL 122
Query: 258 KGTMRKRMEFLDMD 217
KG+MRKRMEFLD D
Sbjct: 123 KGSMRKRMEFLDFD 136
>tr|Q945P8|Q945P8_ARATH At1g19120/F14D16_26 OS=Arabidopsis thaliana GN=At1g19120
PE=2 SV=1
Length = 128
Score = 167 bits (422), Expect = 9e-040
Identities = 85/128 (66%), Positives = 96/128 (75%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSWA P+D++ STSLA+Y SFDQFANAVLE A ERVIVG+L
Sbjct: 1 MSWAAPDDIFFSTSLAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDL 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+PLGLY+IRGENVVLIGELD E+EELP HM +V AEIKRAQKAE+E LKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVEKEELPAHMVQVPEAEIKRAQKAEKEEMLLKGTMRK 120
Query: 240 RMEFLDMD 217
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>tr|B6SHP8|B6SHP8_MAIZE Small nuclear ribonucleoprotein LSM1 OS=Zea mays PE=2
SV=1
Length = 128
Score = 167 bits (421), Expect = 1e-039
Identities = 84/128 (65%), Positives = 95/128 (74%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSW+ P+D+ LSTSLA + SFDQFAN VL+GACERVIVG
Sbjct: 1 MSWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGGQ 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+PLGLYVIRGENVVLIGELD E++ELP HMT V AEI++A+KAEREA DLKGTMRK
Sbjct: 61 YCDVPLGLYVIRGENVVLIGELDHEKDELPAHMTCVLEAEIRKAEKAEREARDLKGTMRK 120
Query: 240 RMEFLDMD 217
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>tr|Q8LEW7|Q8LEW7_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana
PE=2 SV=1
Length = 128
Score = 166 bits (419), Expect = 2e-039
Identities = 85/128 (66%), Positives = 95/128 (74%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSWA P+D++ STSLA Y SFDQFANAVLE A ERVIVG+L
Sbjct: 1 MSWAAPDDIFFSTSLAPYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDL 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+PLGLY+IRGENVVLIGELD E+EELP HM +V AEIKRAQKAE+E LKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVEKEELPAHMLQVPEAEIKRAQKAEKEEMLLKGTMRK 120
Query: 240 RMEFLDMD 217
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>tr|A7PDU1|A7PDU1_VITVI Chromosome chr11 scaffold_13, whole genome shotgun
sequence OS=Vitis vinifera GN=GSVIVT00016411001 PE=4 SV=1
Length = 242
Score = 165 bits (417), Expect = 3e-039
Identities = 83/120 (69%), Positives = 91/120 (75%)
Frame = -3
Query: 600 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGEL 421
MSWAGPED+ STSLASY SFDQFANAVLEGACER IVG++
Sbjct: 1 MSWAGPEDLLFSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDI 60
Query: 420 YCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 241
YCD+PLGLYVIRGENVVL+GELD ++EELPPHMTRV AEIKRAQKAEREA+DLKG K
Sbjct: 61 YCDIPLGLYVIRGENVVLLGELDLDKEELPPHMTRVPEAEIKRAQKAEREATDLKGLHEK 120
Score = 162 bits (408), Expect = 4e-038
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = -3
Query: 486 SFDQFANAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSP 307
SFDQFANAVLEGACER IVG++YCD+PLGLYVIRGENVVL+GELD ++EELPPHMTRV
Sbjct: 153 SFDQFANAVLEGACERAIVGDIYCDIPLGLYVIRGENVVLLGELDLDKEELPPHMTRVPE 212
Query: 306 AEIKRAQKAEREASDLKGTMRKRMEFLDMD 217
AEIKRAQKAEREA+DLKG+MRKRMEFLD D
Sbjct: 213 AEIKRAQKAEREATDLKGSMRKRMEFLDFD 242
>tr|Q9LJI0|Q9LJI0_ARATH Genomic DNA, chromosome 3, P1 clone: MAG2 OS=Arabidopsis
thaliana PE=4 SV=1
Length = 118
Score = 165 bits (417), Expect = 3e-039
Identities = 81/90 (90%), Positives = 85/90 (94%)
Frame = -3
Query: 486 SFDQFANAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSP 307
SFDQFANAVLEGACERVIVGE YCD+PLGLYVIRGENVVLIGELD+EREELPPHM RVS
Sbjct: 29 SFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGENVVLIGELDTEREELPPHMIRVSE 88
Query: 306 AEIKRAQKAEREASDLKGTMRKRMEFLDMD 217
AEIKRAQK EREAS+L+GTMRKRMEFLD D
Sbjct: 89 AEIKRAQKVEREASELRGTMRKRMEFLDFD 118
>tr|A9S414|A9S414_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_162711 PE=4 SV=1
Length = 127
Score = 158 bits (397), Expect = 7e-037
Identities = 82/127 (64%), Positives = 94/127 (74%), Gaps = 1/127 (0%)
Frame = -3
Query: 597 SWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGELY 418
SW+GP D + +TSLA SFDQFAN VLEGA ER+ VGELY
Sbjct: 2 SWSGP-DNFPATSLADNLDKKLLVILRDGRKLIGVLRSFDQFANVVLEGALERITVGELY 60
Query: 417 CDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRKR 238
CDLPLGLY+IRGENVVLIGELD EREELP M RV+P EIK+AQKAE++A++LKGTMRKR
Sbjct: 61 CDLPLGLYIIRGENVVLIGELDLEREELPSFMVRVTPTEIKQAQKAEKDATELKGTMRKR 120
Query: 237 MEFLDMD 217
MEFLD+D
Sbjct: 121 MEFLDID 127
>tr|B8A1F5|B8A1F5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 168
Score = 154 bits (388), Expect = 8e-036
Identities = 75/90 (83%), Positives = 82/90 (91%)
Frame = -3
Query: 486 SFDQFANAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSP 307
SFDQFAN VL+GACERVIVGE YCD+PLGLYVIRGENVVLIGELD E++ELP HMT VS
Sbjct: 79 SFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSE 138
Query: 306 AEIKRAQKAEREASDLKGTMRKRMEFLDMD 217
AEI++A+KAEREA DLKGTMRKRMEFLD D
Sbjct: 139 AEIRKAEKAEREARDLKGTMRKRMEFLDFD 168
>tr|A9SZM3|A9SZM3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_137954 PE=4 SV=1
Length = 127
Score = 151 bits (380), Expect = 7e-035
Identities = 80/127 (62%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
Frame = -3
Query: 597 SWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXXXXSFDQFANAVLEGACERVIVGELY 418
SWAG D + +TSLA SFDQFAN VLEGA ER+ VGELY
Sbjct: 2 SWAG-LDNFPATSLADNLDKKLLVILRDGKKIIGILRSFDQFANVVLEGALERITVGELY 60
Query: 417 CDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRKR 238
CDLPLGLY+IRGENVVLIGELD REELP M RV+P EIK+AQKAE++A++LKGTMRKR
Sbjct: 61 CDLPLGLYIIRGENVVLIGELDLGREELPSFMVRVTPTEIKQAQKAEKDATELKGTMRKR 120
Query: 237 MEFLDMD 217
MEFLD++
Sbjct: 121 MEFLDLE 127
>tr|B6SKB6|B6SKB6_MAIZE Small nuclear ribonucleoprotein LSM1 OS=Zea mays PE=4
SV=1
Length = 105
Score = 142 bits (357), Expect = 3e-032
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = -3
Query: 468 NAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKRA 289
N VL+GACERVIVGE YCD+PLGLYVIRGENVVLIGELD E++ELP HMT VS AEI++A
Sbjct: 22 NVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKA 81
Query: 288 QKAEREASDLKGTMRKRMEFLDMD 217
+KAEREA DLKGTMRKRMEFLD D
Sbjct: 82 EKAEREARDLKGTMRKRMEFLDFD 105
>tr|A8IVB1|A8IVB1_CHLRE Sm protein LSm1 OS=Chlamydomonas reinhardtii GN=LSM1
PE=4 SV=1
Length = 126
Score = 106 bits (264), Expect = 2e-021
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = -3
Query: 486 SFDQFANAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSP 307
SFDQFAN V+EGA ER+IVGE + D+P+GL +IR ENVVL+G +D E + P +TR+
Sbjct: 38 SFDQFANLVIEGAVERIIVGEQFGDIPMGLQIIRAENVVLLGRVD-EAIDAPEGLTRIPA 96
Query: 306 AEIKRAQKAEREASDLKGTMRKRMEFLDMD 217
A+IK AQK E+E + LK T+R RM+FLD+D
Sbjct: 97 AQIKEAQKGEKELNKLKSTIRARMDFLDLD 126
>tr|Q9LMB5|Q9LMB5_ARATH F14D16.28 OS=Arabidopsis thaliana PE=4 SV=1
Length = 223
Score = 98 bits (243), Expect = 5e-019
Identities = 48/60 (80%), Positives = 53/60 (88%)
Frame = -3
Query: 471 ANAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDSEREELPPHMTRVSPAEIKR 292
ANAVLE A ERVIVG+LYCD+PLGLY+IRGENVVLIGELD E+EELP HM +V AEIKR
Sbjct: 130 ANAVLEEAYERVIVGDLYCDIPLGLYIIRGENVVLIGELDVEKEELPAHMVQVPEAEIKR 189
>tr|A4S5K5|A4S5K5_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain
CCE9901) GN=OSTLU_39384 PE=4 SV=1
Length = 126
Score = 92 bits (228), Expect = 3e-017
Identities = 46/89 (51%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = -3
Query: 486 SFDQFANAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDSERE-ELPPHMTRVS 310
SFDQFAN VLE A ER+IVG+++ D+PLGLY++RGENVVL+G++ + + + + V
Sbjct: 37 SFDQFANIVLESAVERIIVGKMFSDIPLGLYIVRGENVVLMGDVGANGDLDGTEGLIEVD 96
Query: 309 PAEIKRAQKAEREASDLKGTMRKRMEFLD 223
AEI RA++A++ A +KG + KRM+FLD
Sbjct: 97 NAEIIRAREADQTAEAMKGDILKRMDFLD 125
>tr|B6HH27|B6HH27_PENCW Pc20g13900 protein OS=Penicillium chrysogenum (strain
ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=Pc20g13900 PE=4 SV=1
Length = 177
Score = 77 bits (189), Expect = 9e-013
Identities = 37/81 (45%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Frame = -3
Query: 486 SFDQFANAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDSERE-ELPPHMTRV- 313
S+DQFAN V + ERV G+LY D+P G++++RGENV+L+GE+D +RE ++PP +TR
Sbjct: 77 SWDQFANLVFQDTVERVYAGQLYADVPRGIFIVRGENVLLLGEVDLDREDDIPPTLTRAP 136
Query: 312 --SPAEIKRAQKAEREASDLK 256
E+K+ + A+R+ D K
Sbjct: 137 FEEVFELKKKEDAKRKTGDKK 157
>tr|A1DH91|A1DH91_NEOFI Small nuclear ribonucleoprotein (LSM1), putative
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
GN=NFIA_087040 PE=4 SV=1
Length = 177
Score = 75 bits (184), Expect = 3e-012
Identities = 35/85 (41%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Frame = -3
Query: 486 SFDQFANAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDSERE-ELPPHMTRV- 313
S+DQFAN VL+ ER+ G LY D+P G++++RGENV+L+GE+D ++E ++PPH+ +
Sbjct: 77 SWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLLGEIDLDKEDDIPPHLQKAP 136
Query: 312 --SPAEIKRAQKAEREASDLKGTMR 244
E+K+ + ++R+ +D K R
Sbjct: 137 FQEVFELKKKEDSKRKITDKKSHNR 161
>tr|B0XSK8|B0XSK8_ASPFC Small nuclear ribonucleoprotein (LSM1), putative
OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=AFUB_027550 PE=4 SV=1
Length = 177
Score = 75 bits (182), Expect = 6e-012
Identities = 34/81 (41%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Frame = -3
Query: 486 SFDQFANAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDSERE-ELPPHMTRV- 313
S+DQFAN VL+ ER+ G LY D+P G++++RGENV+L+GE+D ++E ++PPH+ +
Sbjct: 77 SWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLLGEIDLDKEDDIPPHLQKAP 136
Query: 312 --SPAEIKRAQKAEREASDLK 256
E+K+ + + R+ +D K
Sbjct: 137 FQEVFELKKKEDSRRKITDKK 157
>tr|Q4X0Z1|Q4X0Z1_ASPFU Small nuclear ribonucleoprotein (LSM1), putative
OS=Aspergillus fumigatus GN=AFUA_2G11800 PE=4 SV=1
Length = 177
Score = 75 bits (182), Expect = 6e-012
Identities = 34/81 (41%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Frame = -3
Query: 486 SFDQFANAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDSERE-ELPPHMTRV- 313
S+DQFAN VL+ ER+ G LY D+P G++++RGENV+L+GE+D ++E ++PPH+ +
Sbjct: 77 SWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLLGEIDLDKEDDIPPHLQKAP 136
Query: 312 --SPAEIKRAQKAEREASDLK 256
E+K+ + + R+ +D K
Sbjct: 137 FQEVFELKKKEDSRRKITDKK 157
Database: UniProt/TrEMBL
Posted date: Sun May 10 14:41:50 2009
Number of letters in database: 2,506,224,640
Number of sequences in database: 7,695,149
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 375,280,056,884
Number of Sequences: 7695149
Number of Extensions: 375280056884
Number of Successful Extensions: 316892680
Number of sequences better than 0.0: 0
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