EST translation and GO annotation for unigene RU00546


ESTScan predicted protein sequence

MSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSSSKDGSKLGEEVKFX

ESTScan predicted coding region in original sequence      Start : 3 End : 222 Strand : plus

AAATGTCTCCTCTTCAGAAACAGTACTACAAGTGGATTTTGGAGCGCAACTTCCATAACTTGAACAAAGGAGTTCGTGGGAATCAGGTTT
CATTGTTGAATATTGTAGTAGAGTTGAAGAAATGCTGTAATCATCCCTTCCTTTTTGAAAGTGCTGACCATGGTTATGGTGGGGACTCAA
GCAGTAAAGATGGCAGTAAATTAGGAGAAGAAGTTAAATTTTXX


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF00176    SNF2 family N-terminal domain

        GO:0003677     GO:0003677

        GO:0005524     GO:0005524

GO terms for RU00546 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
   GO:0006333-chromatin assembly or disassembly
GO Molecular Function
   GO:0003676-nucleic acid binding
  GO:0003677-DNA binding
  GO:0003682-chromatin binding
  GO:0004386-helicase activity
  GO:0005524-ATP binding
  GO:0008026-ATP-dependent helicase activity
GO Cellular Component
   GO:0000785-chromatin
  GO:0005634-nucleus