Rose Transcriptome Database

EST translation and GO annotation for unigene RU00842

ESTScan predicted protein sequence

MGEFVTKHWEGFKDFWGERFSFLDHYSKFIKRDKPLPSWSDSDVEAFIASDPIHGPALKTAREAAKFAVTGSAIGAVSTAGFAWKYSRSL
HGSGLAFLAGGVFGWTFGQEIANHSLQLYRFDTLAAQTRFLEWWEDKSERGS

ESTScan predicted coding region in original sequence Start : 115 End : 543 Strand : plus

TACAATTCAGAAAAAATAAAATAAATGAGAAAAGAGGTTTTGAAGAGAGAAATGTGAAAGCAGAGAGAGAAAGAAGAGTGAGAGCAGAAG
AAGAAGAAGAAGAAGAAGAATAGAATGGGTGAGTTCGTTACAAAGCACTGGGAGGGCTTCAAGGATTTCTGGGGCGAAAGGTTCTCCTTC
CTCGATCACTATTCCAAGTTCATCAAGCGTGACAAGCCTCTTCCCTCTTGGTCCGACTCTGATGTCGAAGCCTTCATTGCTTCCGATCCC
ATTCACGGCCCCGCTCTGAAGACAGCTAGGGAAGCAGCGAAATTTGCCGTTACAGGAAGTGCTATTGGAGCTGTATCAACTGCTGGATTT
GCATGGAAATATTCAAGGAGCTTGCATGGTTCTGGACTGGCTTTTTTGGCTGGAGGTGTCTTTGGTTGGACATTTGGACAGGAAATTGCA
AACCACTCGCTTCAACTTTACAGGTTTGACACCTTGGCTGCACAAACTAGGTTCCTGGAATGGTGGGAAGACAAGAGTGAGCGAGGGTCT
TAAACATAGCTTGCTTTGCAATAATCATGTTCCATTTCTACAATAAGTATTGAGCACAGTTGTGTTAAAAAAGTGTAGTGGATAAAGCAT
TGCAAGGAATTTTTCCTTGTTTATGTTGAATTGGGGGCTGAATCCCCCTATTGCATCAACTGTTGCTTTATGTTGGGTTTTATTTTCAGC
TCGAGGAATTTTCTGATGCTTTCACAAAATCAATTAATAAACTGGAACATTTTGGAATAAAAAAAAAGGGCGGGACATCGTTTATGGTTG
AGACTAGG

X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS

InterProtein domain annotations

Pfam domain annotations

GO terms for RU00842 (based on the top Swiss-Prot and TrEMBL hits)

GO Biological Process

GO:0001522-pseudouridine synthesis
GO:0008033-tRNA processing

GO Molecular Function

GO:0009982-pseudouridine synthase activity