EST translation and GO annotation for unigene RU01217


ESTScan predicted protein sequence

XTSSSSPHSGFNPQKPSWNDALASSDRNSDTCRAAARSFLRGIDVNRLPSTGDCEDVSSPNSTVSSVSGKRSEREANGEDLDLERDGSRG
MSDEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRL
QKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPPNSTPPSATIDPRAHHHHHPMVPVHHPRAIPVAGPWAAAAPIPQQQRPFDAF
RAARP

ESTScan predicted coding region in original sequence      Start : 1 End : 826 Strand : plus


XXGACTTCATCTTCGTCTCCTCATTCTGGGTTCAATCCCCAAAAGCCCTCTTGGAATGATGCGTTGGCTTCTTCAGATCGAAACTCGGAC
ACGTGTCGCGCCGCGGCCCGGTCCTTCCTCCGGGGCATCGACGTGAACAGGCTGCCGTCGACGGGCGACTGCGAGGACGTGTCGTCGCCG
AACAGCACTGTATCAAGCGTGAGCGGGAAGCGAAGCGAGAGAGAGGCCAATGGCGAAGATCTCGACCTCGAAAGAGACGGCTCACGAGGC
ATGAGCGACGAAGAGGACGGCGAGACCTCGAGAAAGAAGCTCAGGCTCTCCAAGGACCAGTCGGCCATTCTCGAAGAGAGCTTCAAGGAG
CACAACACCCTCAACCCTAAGCAAAAGCTGGCTTTGGCTAAGCAGCTCGGGCTCAGGCCTAGACAGGTGGAAGTCTGGTTTCAGAACAGA
AGGGCAAGGACTAAGTTGAAGCAAACGGAGGTGGACTGTGAGTTCCTAAAGAGGTGCTGCGAGAATCTGACGGAGGAGAACCGGAGGTTG
CAGAAAGAAGTTCAGGAGCTGAGAGCACTGAAACTCTCCCCACAGTTCTACATGCAAATGACCCCACCAACCACCCTCACCATGTGCCCC
TCGTGTGAGCGTGTCGCGGTCCCACCAAACTCCACGCCACCATCCGCCACCATCGATCCCCGGGCACACCATCACCACCACCCGATGGTG
CCCGTCCACCATCCGCGGGCCATCCCGGTCGCCGGCCCGTGGGCCGCCGCCGCCCCCATCCCACAACAACAACGGCCCTTCGACGCCTTC
CGCGCCGCGCGGCCGTGATGCCCGTCCCGGTCCAGGGGTATTTTGGTCCTTTTGGTCAGTGGGGCTTTTGATAATGCGATGTTACTGTTT
TAGAATCCGTACGGAGTATGTGCAAAAAAGAAGCGGTTGTAATAGCGTACCAATTCTTATACATATTCTGAGCTCGAAGTTTAGGTCTCG
GTCTCTAAGATATGGTTGTTAGAAGATGCGATTTGGTGGGTCTTATGTGTTTTGTAGTATTGGACCCATCATTCTCATCATCTTCTTCAT
CTTCCTTTATAGATTAGGGTTTGGTGGTGGTACTAATATCTTCCCTCCTTTTCCATAAACAATTTGTAGGGAAAAAAGGATTGGGAACAA
GAGGAGG


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF00046    Homeobox domain

        GO:0003700     GO:0003700

        GO:0005634     GO:0005634

        GO:0006355     GO:0006355

        GO:0043565     GO:0043565

PF02183    Homeobox associated leucine zipper

        GO:0003677     GO:0003677

        GO:0005634     GO:0005634

        GO:0006355     GO:0006355

PF04618    HD-ZIP protein N terminus

        GO:0005634     GO:0005634

        GO:0006350     GO:0006350

        GO:0016563     GO:0016563

GO terms for RU01217 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
   GO:0006350-transcription
  GO:0006355-regulation of transcription, DNA-dependent
  GO:0045449-regulation of transcription
GO Molecular Function
   GO:0003677-DNA binding
  GO:0003700-transcription factor activity
  GO:0016563-transcription activator activity
  GO:0030528-transcription regulator activity
  GO:0043565-sequence-specific DNA binding
GO Cellular Component
   GO:0005634-nucleus