Rose Transcriptome Database

EST translation and GO annotation for unigene RU01286

ESTScan predicted protein sequence

XSVPSSVGPSSSSPNEQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFYLQNGHCKFGSSCK
FDHPMGTMRYSPSASSLDMPVAPFPVGSLLGTLAPSSSSSELRPELISARMPSSGNPSSSSVGLIFSQSGSVSLADVQLSSQTSVPISNS
RSTRQGGEVRRSS

ESTScan predicted coding region in original sequence Start : 1 End : 581 Strand : minus

XCATCTGTACCATCATCTGTTGGCCCTTCTAGCAGCAGCCCAAATGAACAAGCCTTCCCAGAGAGGCCTGGAGAACCTGAATGCCAGTAT
TACCTGAGAACTGGAGACTGTAAATTTGGACCCTCCTGTCGGTACCATCATCCTCGAGATCGGATTGCACCAAGGACAAATTGTCTCCTC
AGTCCAGTTGGTCTCCCACTCCGTTCGGGCGTGCAACCTTGTATGTTTTACTTGCAAAATGGGCATTGCAAGTTTGGATCTTCCTGCAAG
TTCGATCATCCAATGGGGACCATGAGATATAGCCCATCAGCTTCATCTCTCGATATGCCTGTTGCTCCATTCCCAGTTGGATCTTTGCTG
GGCACTCTGGCTCCTTCATCCTCATCTTCAGAGCTTCGACCTGAATTAATTTCAGCTAGAATGCCCTCTTCTGGGAACCCGTCAAGTAGT
TCAGTCGGATTGATTTTTTCTCAAAGCGGATCTGTTTCACTAGCTGATGTGCAACTATCAAGTCAAACTTCTGTTCCTATAAGCAATAGC
AGAAGCACAAGGCAAGGTGGCGAGGTTCGTCGTTCGAGCTAATGTAATTCCCGAAAGTCACTCCTCATTGTCTCCTGGGTGCAGTTTCAA
CCAGCCACTCTGTTTATAGATGTCGGGTAAATGTGTAATGGTCAATTGTGCAAAGGTTTTATATTTCAGTCATGGTCTATCAACAAATTG
TGTTTAGCCCACACTAGGATGGATATTGTTGATGCTAGTGTCATCTATATACAGCAATCAATATGATTCCAAATAAGCTGCAAATATCAA
ATCCCATATGTACTTTCTATCTCTTTCAAGTAATTATAGTAGAGAGCAAGCAATTCAAATAAGCCTGCCATGTTTCCTTCGACTTTGAAA
CATTTACAAGTGTTCTTATCATTTTGTTTTCTGCAATTAAAAGTGTCACCATCTTCAGGT

X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS

InterProtein domain annotations

Pfam domain annotations

PF00642    Zinc finger C-x8-C-x5-C-x3-H type (and similar)

        GO:0003676     GO:0003676

        GO:0008270     GO:0008270

GO terms for RU01286 (based on the top Swiss-Prot and TrEMBL hits)

GO Biological Process

GO Molecular Function

  GO:0003676-nucleic acid binding
  GO:0008270-zinc ion binding
  GO:0046872-metal ion binding