Rose Transcriptome Database

EST translation and GO annotation for unigene RU02186

ESTScan predicted protein sequence

MAQAQVQGQNANAAAAAAAAAAANGGGANQFVTTSLYVGDLDQNITDSQLYDLFNQLGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAAR
ALDVLNFTPVNGRPIRIMYSHRDPSIRKSGSGNIFIKNLDKALDHKALHDTFSSFGNILSCKVATDSSGQSKGYGFVQFDNEEAAQKAIA
KLNGMLINDKQVFVGPFLRKQEREGVADKSKFQNVYVKNLSESTTEDDFTKIFGEFGPITSVVIMRDQDGKSKCFGFVNFDNPDDAARAV
EALNGKKFDDKEWYVGKAQKKSERENELKLRFEQSMKEAADKYQGANLYVKNLDDSIVDDKLKELFTPFGTITSCKVMRDPNGVSRGSGF
VAFSTPEEANRALAEMNGKMIVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMAPSVAPRMPMYPPGGPGIGQQIFYGQAPPAIIPSQPG
FGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQRPGGRRAGPAQQNQQPVPLMQQQMLPRGRIYRYPSGRALPDGPMPGVGGMFSVPYDL
SGMPLRDPALSQPVPIGTLASALANATPEQQRTMLGETLPTGGTAGT

ESTScan predicted coding region in original sequence Start : 24 End : 1787 Strand : plus

TGTCGAGCGTCTTTTGGGTGAAGATGGCGCAAGCTCAGGTTCAGGGTCAGAATGCGAACGCGGCGGCGGCGGCGGCTGCTGCTGCGGCGG
CTAATGGTGGTGGGGCCAACCAGTTCGTGACGACGTCGCTTTACGTTGGGGATCTCGACCAGAACATTACGGATTCGCAGCTGTACGACC
TGTTCAACCAGCTGGGTCAGGTCGTGTCTGTTAGGGTTTGCAGGGACTTGTCCACCCGGAGGTCGCTTGGTTACGGCTATGTCAATTATA
GCAACCCGCAGGATGCTGCTAGGGCATTGGATGTGTTGAACTTCACTCCTGTAAATGGGAGGCCCATTAGGATCATGTACTCTCACCGTG
ATCCTAGTATTCGTAAAAGTGGGTCTGGAAATATATTTATTAAGAATTTGGACAAAGCTCTTGATCACAAAGCCTTGCATGATACATTTT
CTTCATTCGGAAACATCCTTTCTTGCAAGGTGGCAACAGACTCCTCTGGCCAGTCAAAGGGCTATGGCTTTGTGCAATTTGATAATGAAG
AAGCTGCCCAAAAAGCTATTGCGAAGTTGAATGGTATGCTTATAAATGATAAGCAAGTTTTTGTAGGACCATTCCTCCGCAAACAGGAAA
GGGAGGGTGTTGCTGACAAGTCAAAGTTCCAGAATGTTTATGTGAAGAATCTATCAGAATCGACTACTGAAGATGATTTTACCAAAATTT
TTGGTGAATTTGGACCAATCACTAGCGTAGTGATCATGAGAGATCAAGATGGAAAATCAAAGTGCTTTGGATTTGTCAACTTTGATAATC
CAGATGATGCTGCCAGAGCTGTTGAGGCTCTGAATGGAAAGAAATTTGATGATAAGGAGTGGTATGTTGGGAAGGCCCAGAAGAAATCTG
AAAGGGAAAATGAATTGAAACTTCGATTTGAACAGAGCATGAAAGAGGCAGCAGACAAATATCAAGGAGCAAACTTGTATGTTAAAAATT
TAGATGATAGCATAGTTGATGATAAACTTAAGGAGCTCTTCACTCCATTTGGCACAATTACCTCGTGTAAGGTCATGCGAGACCCCAACG
GAGTAAGTAGGGGTTCCGGTTTTGTTGCATTCTCAACTCCTGAAGAGGCAAATAGAGCTCTGGCAGAGATGAATGGAAAAATGATTGTAA
GCAAACCTCTCTATGTTGCACTTGCGCAACGAAAAGAAGATAGAAGAGCGAGGCTCCAGGCTCAGTTTTCTCAAATGCGGCCAGTTGCAA
TGGCACCTTCAGTTGCTCCTCGTATGCCAATGTACCCTCCTGGTGGTCCAGGTATTGGACAGCAAATATTCTATGGTCAAGCCCCACCTG
CTATCATTCCCTCCCAGCCTGGATTTGGATATCAGCAGCAGCTTGTTCCTGGTATGAGACCTGGCGGCGCTCCCATGCCAAACTTCTTTG
TGCCAATGGTTCAGCAGGGGCAGCAAGGGCAGCGCCCTGGTGGCAGACGTGCAGGCCCTGCGCAGCAAAACCAGCAACCAGTTCCATTAA
TGCAACAGCAGATGCTTCCAAGAGGGCGTATCTACCGTTACCCGTCTGGGCGCGCTCTGCCTGATGGTCCCATGCCTGGTGTTGGAGGCA
TGTTTTCTGTTCCATATGACTTGTCTGGCATGCCATTGCGTGATCCAGCACTGTCTCAGCCTGTTCCAATTGGGACTTTGGCTAGTGCCC
TTGCAAATGCTACACCGGAGCAGCAAAGGACGATGCTTGGGGAAACTTTACCCACTGGTGGAACAGCTGGAACCTGACAATGCAGCGAAG
GT

X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS

InterProtein domain annotations

Pfam domain annotations

PF00076    RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

        GO:0003676     GO:0003676

PF00658    Poly-adenylate binding protein, unique domain

        GO:0003723     GO:0003723

GO terms for RU02186 (based on the top Swiss-Prot and TrEMBL hits)

GO Biological Process

GO Molecular Function

  GO:0000166-nucleotide binding
  GO:0003676-nucleic acid binding
  GO:0003723-RNA binding