Rose Transcriptome Database

EST translation and GO annotation for unigene RU03309

ESTScan predicted protein sequence

GRRRRTKKQALHSNTMSSPSKRREMDLMKLMMSDYKVDMINDGMHEFYVDFHGPSESPYQGGVWRIRVELPDAYPYKSPSIGFINKIYHP
NVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRASYEQRVKEYCLKYAKPEDIGAVPEDKSSDEEL
SEDESDSCDDQVAGPADP

ESTScan predicted coding region in original sequence Start : 1 End : 597 Strand : minus

GGAAGAAGAAGAAGAACAAAGAAACAGGCTTTGCACAGTAACACCATGTCTTCCCCAAGCAAACGCAGAGAGATGGACTTGATGAAACTG
ATGATGAGTGATTACAAGGTGGACATGATTAATGATGGAATGCATGAGTTCTATGTAGATTTCCATGGACCCAGCGAGAGTCCTTATCAG
GGAGGCGTGTGGAGGATAAGAGTTGAACTACCAGATGCTTATCCCTATAAATCTCCCTCAATAGGCTTTATCAATAAGATCTACCACCCA
AATGTTGATGAGATGTCAGGTTCGGTTTGCTTAGATGTTATCAATCAAACGTGGAGCCCCATGTTTGATTTGGTAAATGTATTTGAAGTA
TTCCTGCCACAGCTTCTGCTGTATCCCAATCCATCAGACCCTTTAAATGGAGAGGCTGCAGCTTTAATGATGCGTGACCGAGCTTCTTAT
GAACAAAGAGTCAAGGAATACTGTCTGAAGTATGCCAAGCCTGAAGATATAGGAGCTGTCCCAGAAGACAAATCAAGTGATGAAGAACTG
AGTGAAGATGAATCTGACTCCTGTGATGACCAAGTGGCCGGTCCAGCAGATCCATAGCCATAGTCATAGGGATTTCTTCTGTTCTCATGT
TCTGTCTAAACTATGTGTCATCTGTTACTCTGTACATGATGTAGCCTTTTCTTAATTCATCCCCAACTCCAAAGAAGACTCTGGATATTG
GGAAGGGAAAGAATTTCCCCCAGTCTGTATTGGTTTCCGTTGTCAATGTAAATAAATGTACCATTGTTTTCCGAAAA

X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS

InterProtein domain annotations

Pfam domain annotations

PF00179    Ubiquitin-conjugating enzyme

        GO:0019787     GO:0019787

        GO:0043687     GO:0043687

        GO:0051246     GO:0051246

GO terms for RU03309 (based on the top Swiss-Prot and TrEMBL hits)

GO Biological Process

  GO:0016567-protein ubiquitination
  GO:0019941-modification-dependent protein catabolic process
  GO:0043687-post-translational protein modification
  GO:0051246-regulation of protein metabolic process

GO Molecular Function

  GO:0004842-ubiquitin-protein ligase activity
  GO:0016874-ligase activity
  GO:0019787-small conjugating protein ligase activity