EST translation and GO annotation for unigene RU03368


ESTScan predicted protein sequence

MAGGGRXSIVVAVVPRFCLQNQRGSCAPEPLDSLFLSGSSNVSSTSPFLGSSMMSFEGVRRGNGLKRSAFQQYEHEDNCDEEFDEYFHQP
GKKRRLTADQVQFLEKSFDLENKLEPERKILLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQADYNSLKADCDSICKENDKLKAE
VVQLSDRLRLKDEEMANSEQSDTNKSNQEPQQMPIAESVSSEGEVSKLSVVACKEDLTSVKSDIFDSDSSHYTDGVHSSLLERGDSSYIF
EPDQSDLSQDEEDNLSKTLLPPYIFPKLEDVDYTDPPANSCNFGFPVEDHAFWSW


ESTScan predicted coding region in original sequence      Start : 327 End : 1300 Strand : plus

CTCCCTCCCCCTCTGTCTCTCTCTCTCTCTCTCTCTCTCCCTCTTGAGTTTTCCATTTTGCACAGAGAGAGCACTTCTTCTTCAAAACCC
AGAAGGTTAAAGAACCTCTCTTTCTCCTTATTCTGAGTGATGGGGGTGAGCAGCCGTTGTTCCCACACTTCCCACATCACTGAAATCATC
ATCACCAGCTTCTTTCGCCACAAAGCTTAGGCCTTTTCAGTTCGGACCCGACTTCGGATCATCATCGTCTCAAACCAGGCTGTGATGTCA
GATTAAATTTTCAACAAAAACCAGTATAGAACTAAAACAAATTTGAAAGAGTAAACATGGCCGGCGGTGGGAGGXGGTCTATAGTAGTAG
CGGTGGTGCCTCGTTTTTGTCTTCAGAATCAGAGAGGTTCTTGCGCTCCCGAGCCTCTGGATTCTCTCTTCCTTTCTGGGTCCTCTAATG
TTTCATCTACTTCTCCTTTTCTCGGTTCATCCATGATGAGTTTCGAAGGTGTTCGGAGAGGAAATGGATTGAAGAGGTCCGCGTTCCAGC
AATACGAGCACGAAGACAATTGTGATGAGGAATTCGATGAGTACTTTCATCAACCTGGAAAGAAGAGGCGGCTAACTGCTGATCAAGTCC
AGTTCCTCGAGAAAAGCTTTGACTTGGAAAACAAGCTTGAACCAGAAAGGAAGATCCTGCTTGCAAAAGACCTTGGCTTGCAGCCTCGGC
AGGTTGCGATTTGGTTCCAAAACCGCCGCGCAAGGTGGAAGACAAAGCAGCTGGAGAAGGACTATGATGTTTTGCAAGCCGACTATAATA
GTCTCAAGGCGGATTGCGATAGCATTTGTAAAGAGAATGATAAGCTGAAAGCTGAGGTTGTTCAGCTATCGGACAGGCTGCGGCTGAAAG
ACGAAGAGATGGCAAACTCAGAACAATCGGATACGAATAAATCAAATCAAGAACCACAGCAGATGCCAATTGCTGAATCGGTCTCCTCCG
AAGGTGAAGTATCCAAACTCTCGGTTGTGGCATGTAAGGAAGATCTGACCTCAGTCAAGAGTGATATATTTGACTCGGATAGCTCACATT
ACACCGATGGGGTTCACTCTTCTCTCTTAGAGCGTGGTGATTCTTCATATATTTTTGAACCCGATCAGTCTGATCTTTCCCAAGATGAAG
AAGACAACTTGAGCAAAACCCTATTGCCACCATACATCTTTCCGAAGCTTGAAGATGTTGATTACACAGACCCTCCTGCAAATTCATGTA
ATTTCGGGTTCCCAGTGGAAGATCATGCCTTTTGGTCCTGG
TCTTACTAGGATTTCTTTGGTATAATACAATTCCTGCGTTATCGTGTTC
TTATTTGATAGTATGGCGTATAAGTGAGAATAAGTAATGAATCCAAGCAGCGTCAATGGCACCCCGATCCACATGTGGTGGTGGGTTTAG
GTTTCAGTTGAAAGCAGAAAAAATGGCGGTGCTTGCCCCATTTGTAATCTGACCAAGGAATTGGGGTTCTGTAGTGTTTCATGTACCATT
TTTGTAAGAAATGTAATTAAATAAAAGTTCTTTTATGTAAGCAAAGCTTGATGGAAATGCCATTTCATTTCACCTCCAAAAAAAAA


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF00046    Homeobox domain

        GO:0003700     GO:0003700

        GO:0005634     GO:0005634

        GO:0006355     GO:0006355

        GO:0043565     GO:0043565

PF02183    Homeobox associated leucine zipper

        GO:0003677     GO:0003677

        GO:0005634     GO:0005634

        GO:0006355     GO:0006355

GO terms for RU03368 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
  GO:0006355-regulation of transcription, DNA-dependent
  GO:0045449-regulation of transcription
GO Molecular Function
  GO:0003677-DNA binding
  GO:0003700-transcription factor activity
  GO:0030528-transcription regulator activity
  GO:0043565-sequence-specific DNA binding
GO Cellular Component
  GO:0005634-nucleus