Rose Transcriptome Database

EST translation and GO annotation for unigene RU04281

ESTScan predicted protein sequence

MAEERSTGVVKWFNDTKGFGFITPDNNTEDLFVHQSSIKSDGFRTVAEGDAVEFLIAVGEDGKTKAVDVTGPNGAPLPGKESFARSGGRG
GGGRDAAGFGGAWRGGDRRNGGGGGGCYTCGDTGHMARDCNRGGNGGGGGRGGGDGCFTCGGYGHMARNCPNGNSGGGGGGX

ESTScan predicted coding region in original sequence Start : 35 End : 548 Strand : plus

TCCTCTCTGAAAGTTTAGGGTTAGGGTTTCAAGAATGGCGGAGGAGAGGTCGACTGGGGTAGTGAAGTGGTTCAATGACACCAAGGGTTT
CGGCTTCATCACCCCTGACAACAACACCGAAGATCTGTTCGTCCACCAATCCTCGATCAAATCCGACGGCTTCCGCACAGTCGCCGAGGG
CGACGCCGTTGAGTTTCTGATCGCCGTCGGCGAGGACGGCAAGACCAAGGCCGTCGATGTCACTGGTCCGAACGGCGCGCCTCTGCCGGG
GAAGGAGAGTTTTGCTCGGTCCGGTGGCCGTGGCGGTGGCGGTCGAGACGCTGCGGGATTCGGCGGTGCGTGGAGAGGTGGAGATCGCCG
TAACGGCGGCGGAGGCGGCGGGTGTTATACTTGCGGCGATACTGGTCACATGGCTAGGGATTGCAATCGCGGTGGGAATGGAGGCGGTGG
AGGCCGCGGTGGTGGTGATGGATGCTTTACTTGCGGAGGGTATGGACACATGGCAAGGAATTGTCCTAATGGGAACAGCGGCGGTGGTGG
CGGTGGCCXX

X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS

InterProtein domain annotations

Pfam domain annotations

PF00098    Zinc knuckle

        GO:0003676     GO:0003676

        GO:0008270     GO:0008270

PF00313    'Cold-shock' DNA-binding domain

        GO:0003677     GO:0003677

        GO:0006355     GO:0006355

GO terms for RU04281 (based on the top Swiss-Prot and TrEMBL hits)

GO Biological Process

GO:0006355-regulation of transcription, DNA-dependent

GO Molecular Function

  GO:0000166-nucleotide binding
  GO:0003676-nucleic acid binding
  GO:0003677-DNA binding