EST translation and GO annotation for unigene RU04620


ESTScan predicted protein sequence

MSPPLLGGEGEGKSNGSMVACSPSMDMIPQNSSGLKERNYLGLSDCSSVDSSTVSSLSEENKSKFNFKATELRLGLPGSQSPERQSELCL
LDEKPLFPLLPSKDGICSSSQKNVVSGNKRGFSDTMDGFSEVKSSVYNEGNWMFPAAGSDSESPESVGQGKFPVSSINVMLSSRTSGTQP
TKMKDIMTKSSKDQSNATNGAGQNHAAASNNNSAPAAKAQVVGWPPIRSFRKNLTTASKNNDEVDGKPGRGALFVKVSMDGAPYLRKVDL
RTYSTYQELSSALEKMFSCFTIGQYGSHGAPGRERLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGL
APRSMEKSKNRT

ESTScan predicted coding region in original sequence      Start : 157 End : 1275 Strand : plus

GGAGCCTCTCTCTCTCTCTCTTCTCAGCTTTGCTCTGCTCTCATTCACTTTTGTTTTGCTAAAAATTTTCTTTGACGAATTCCGGAAGGC
GTTTCTGGGTCTTGTTCCTCTTTGTCTGATCCAAACGGGTTCTTCAGTTGATAATTTTGTAGTCTGATGTCTCCACCACTGCTGGGTGGT
GAGGGGGAAGGGAAGAGCAATGGATCGATGGTAGCTTGTTCTCCCTCTATGGACATGATCCCTCAGAACAGCTCAGGACTGAAAGAGCGT
AACTACCTTGGGTTGTCAGATTGTTCTTCAGTTGACAGCTCCACTGTCTCAAGCTTGTCAGAGGAGAATAAGAGCAAGTTCAATTTTAAG
GCTACAGAGTTGAGGCTTGGTCTTCCTGGATCCCAATCACCAGAACGACAATCAGAGCTTTGCTTGCTTGATGAGAAGCCACTGTTTCCT
TTGCTTCCTTCAAAAGATGGAATATGTTCCTCATCCCAGAAAAATGTTGTTTCAGGCAACAAAAGAGGCTTTTCTGATACCATGGACGGA
TTCTCAGAGGTGAAAAGTTCTGTATATAATGAAGGAAATTGGATGTTTCCTGCAGCTGGTTCTGATTCTGAATCACCAGAGTCTGTCGGA
CAAGGTAAGTTTCCTGTGAGTTCAATCAATGTGATGCTCTCATCCAGGACTTCTGGGACTCAGCCAACCAAGATGAAAGATATTATGACC
AAATCTTCAAAAGATCAGTCCAATGCTACAAATGGAGCTGGCCAGAACCATGCGGCTGCTTCTAACAACAACAGTGCCCCCGCTGCTAAG
GCACAAGTTGTAGGGTGGCCTCCAATAAGATCTTTTAGGAAGAATTTAACCACCGCTTCAAAGAACAATGATGAAGTTGATGGAAAACCT
GGTCGAGGTGCTCTTTTTGTCAAGGTCAGCATGGATGGTGCTCCCTACCTGAGGAAGGTAGATCTGAGAACCTACTCAACATATCAAGAG
TTGTCTTCTGCTCTGGAAAAGATGTTCAGCTGTTTTACCATCGGGCAATATGGATCCCATGGAGCTCCAGGGAGGGAAAGATTGAGTGAG
AGTAAGCTGAGAGACCTTCTTCATGGATCAGAATATGTGCTTACATATGAGGACAAGGATGGTGATTGGATGCTTGTCGGAGATGTCCCA
TGGGAGATGTTTATTGATTCATGCAAGAGGTTGAAGATAATGAAGGGCTCTGATGCCATTGGCTTAGCTCCTAGGTCCATGGAGAAATCC
AAGAACCGGACCTAGCCAAGTCCCCAAAAATGACTGTTTCGAGTTGCCTTATTCAAAGTGAAGATCAGAGTTTTGGGGAAAGAGTGAGCT
AGCCACAAAAGTTGTAACTTGGAGGAAGAACACTGACAGGATGGATGTCGGGGGCTGGATGGCAGTATCATCTTGTCTTTGATGTTTTCA
TTGTCATCAGTCTGTTTTGAGTCTTGTTTGTTATGAAACCTATTAAGACTGGTTAAAATTATTAATGTTTGTGAAGTCCATATAGCCTAC
TAGTTATTGAAGCTGTTGAATCTGATGATTATGTTTTATCACTGTCGTTGATTGCCCTTAAAAAAAAAA


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF02309    AUX/IAA family

        GO:0005634     GO:0005634

        GO:0045449     GO:0045449

GO terms for RU04620 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
   GO:0006350-transcription
  GO:0006355-regulation of transcription, DNA-dependent
  GO:0009734-auxin mediated signaling pathway
  GO:0045449-regulation of transcription
GO Molecular Function
   GO:0046983-protein dimerization activity
GO Cellular Component
   GO:0005634-nucleus