EST translation and GO annotation for unigene RU04898


ESTScan predicted protein sequence

NERPTLEINNNKSEGGVESGGGGGGGDGVINWQNARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGLSHG
MVADDKELDQFMRHYVLL

ESTScan predicted coding region in original sequence      Start : 1 End : 324 Strand : plus


AACGAACGACCGACCCTAGAAATAAACAATAACAAGAGCGAGGGCGGAGTTGAGAGCGGCGGCGGAGGAGGAGGAGGCGACGGGGTCATC
AACTGGCAGAATGCGAGGCACAAAGCGGAGATTCTAGCTCACCCGTTTTACGAGCCGCTTCTCTCGGCACACGTGGCGTGCCTGAGGATC
GCCACGCCGGTGGACCAGCTTCCGAGGATCGACGCTCAGCTGGCTCAGTCGCAGAATGTGGTGGCTAAGTACTCCGGTTTGAGTCACGGC
ATGGTCGCCGATGATAAGGAGCTTGATCAGTTCATGAGGCACTATGTTTTGTTG


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF03790    KNOX1 domain

        GO:0003677     GO:0003677

        GO:0005634     GO:0005634

PF03791    KNOX2 domain

        GO:0003677     GO:0003677

        GO:0005634     GO:0005634

GO terms for RU04898 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
   GO:0006355-regulation of transcription, DNA-dependent
  GO:0045449-regulation of transcription
GO Molecular Function
   GO:0003677-DNA binding
  GO:0003700-transcription factor activity
  GO:0043565-sequence-specific DNA binding
GO Cellular Component
   GO:0005634-nucleus