EST translation and GO annotation for unigene RU05335


ESTScan predicted protein sequence

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNVSTREALEL
SSQQEYLKLKARYEALQRNQRNLLGEDLGPLSSKELESLERQLDMSLKQIRSTRTQCMLDQLTDLQRKEHMLNEANRTLKQRLFEGYNVH
QLQLNANAEDVGYGRQQAHHQPQGEGFFQPLECEPTLQIGYHQNDPIQVVTAGPSVNYMGGWLP


ESTScan predicted coding region in original sequence      Start : 278 End : 1012 Strand : minus

TTTTTTCCAAAAACGCGGTTTTTGAAAGCAGAGAGATAGTTTGAGAGTTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTCTGAAACA
AGGTGGTAATGGAAATTGGGAGGATTTAGAATTATGAATTGAATATAATTAATTATTGCAGGAGGTGGTCGTCATATATATAGCGGATTA
AACCAAGGAGAGGTTTGCTTTTGTGGTATTGTGGTTGGGCTAGTGGGAAAGTACTAATATTGTTGTAGAGAGAGAGAGAGAGAGAGAGAG
AAGAGAAATGGGGAGGGGGAGAGTTGAGCTGAAGAGGATTGAGAACAAGATCAACAGGCAGGTGACCTTTGCAAAGAGAAGGAACGGACT
ATTGAAGAAAGCCTACGAGCTTTCCGTTCTTTGCGATGCCGAGGTTGCTCTCATCATCTTCTCCAATAGAGGAAAGCTGTACGAGTTTTG
CAGTAGTTCAAGCATGCTCAAAACACTTGAGAGGTACCAGAAGTGCAACTATGGAGCACCGGAGACAAATGTATCTACAAGGGAGGCCTT
GGAATTGAGCAGCCAGCAGGAGTATTTGAAGCTCAAGGCACGTTATGAAGCCCTACAAAGAAACCAAAGGAATCTTCTTGGAGAAGATCT
TGGCCCTTTAAGTAGCAAAGAGCTTGAATCACTTGAAAGGCAGCTGGACATGTCATTGAAGCAGATCAGATCAACACGGACCCAATGCAT
GCTGGATCAGCTCACAGATCTTCAGCGAAAGGAACACATGCTTAATGAAGCAAACAGGACACTGAAACAAAGGTTGTTTGAGGGATACAA
TGTACATCAACTCCAACTGAATGCAAATGCTGAGGATGTGGGATATGGCCGGCAACAAGCTCATCATCAACCTCAGGGCGAGGGCTTCTT
CCAACCCTTAGAGTGCGAGCCCACGTTACAAATTGGGTATCACCAGAATGATCCGATACAAGTTGTGACGGCCGGGCCGAGCGTGAATTA
CATGGGAGGATGGTTGCCATGA
TAAATAAGAACACAGAGAGCAAGCAACTCTGTGTGGTGAAGCCATGCATGCACGTTATGATGTTTGCA
GCTGTGAGCTGTATGTTTATGTTTGTTTCATTATGTTTTCATTTTTATAATTCTGAGCAAAACAAACCGATCATCAACTTGTAATAGTAT
GGATTTATGTCATAATTAACTCTGAACATTAGAGTTGTGCGTGCGTGCTCTCGAGCACTCGCTTCTTTTAGCTTATCAAGCTTGCTTTGC
AAAATTAATGATTACTAGTACCCCTTTGCATAGAGTGTAAAAACTTTGCTGTCTGACCAATTTGGGGCAAGCTTGTTGGTAATAATATAT
TATAAAATTACTGTTTCCAAAA


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF00319    SRF-type transcription factor (DNA-binding and dimerisation domain)

        GO:0003700     GO:0003700

        GO:0005634     GO:0005634

        GO:0006355     GO:0006355

        GO:0043565     GO:0043565

PF01486    K-box region

        GO:0003700     GO:0003700

        GO:0005634     GO:0005634

        GO:0006355     GO:0006355

GO terms for RU05335 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
  GO:0006350-transcription
  GO:0006355-regulation of transcription, DNA-dependent
GO Molecular Function
  GO:0003677-DNA binding
  GO:0003700-transcription factor activity
  GO:0043565-sequence-specific DNA binding
GO Cellular Component
  GO:0005634-nucleus