EST translation and GO annotation for unigene RU06040


ESTScan predicted protein sequence

MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVI
DAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQSREHALLAFTLGVRQMICCCNKMDATSPKYSKARYDEIVKEVSSYLKK
IGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDMINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP
TGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
KEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDPSGAKVTKSAAKKK


ESTScan predicted coding region in original sequence      Start : 95 End : 1438 Strand : minus

GATATCATCGATTGGCAGAGGTGAATCTCCTGTGCCTCGGCTCTCTCTCTCTAGGGTTTTAGCACTTCCTCCAGGTTCAAGTTGATATTT
CGTTATGGGCAAGGAAAAGTTTCATATCAACATTGTGGTTATTGGCCATGTTGACTCTGGGAAGTCGACCACTACTGGTCATTTGATCTA
CAAGCTTGGGGGTATTGACAAGCGTGTGATTGAGAGGTTCGAGAAGGAGGCTGCTGAGATGAACAAGCGTTCATTCAAGTATGCTTGGGT
GCTTGACAAGCTTAAGGCTGAGCGTGAAAGGGGTATTACCATTGACATTGCTCTCTGGAAGTTTGAGACCACCAAGTACTACTGCACTGT
CATTGATGCTCCTGGACATCGTGACTTCATCAAGAACATGATTACTGGAACTTCCCAGGCTGATTGTGCTGTCCTCATTATTGACTCTAC
CACTGGAGGTTTTGAGGCTGGTATCTCTAAGGATGGTCAGTCCCGTGAGCATGCTCTCCTTGCTTTCACCCTTGGTGTTAGGCAAATGAT
TTGTTGCTGCAACAAGATGGATGCTACCAGTCCTAAGTACTCGAAGGCAAGGTATGATGAAATCGTGAAGGAAGTGTCATCCTATCTGAA
GAAGATTGGATACAACCCAGACAAAATTGCTTTTGTTCCCATCTCTGGATTTGAGGGTGACAACATGATTGAGAGGTCCACCAACCTCGA
CTGGTACAAGGGTCCAACCCTTCTTGAGGCCCTTGACATGATCAACGAGCCCAAGAGGCCCTCCGACAAGCCCCTCCGACTTCCACTTCA
GGATGTCTACAAGATTGGAGGTATTGGAACTGTTCCTGTTGGACGTGTGGAGACTGGTATTATCAAGCCTGGTATGGTTGTGACTTTTGC
TCCCACTGGGTTGACCACTGAAGTTAAATCTGTGGAGATGCACCACGAGGCTCTCCAGGAGGCTCTTCCCGGTGACAATGTTGGCTTCAA
CGTCAAGAACGTTGCAGTCAAGGATCTCAAGCGTGGGTATGTTGCTTCAAACTCCAAGGATGATCCAGCCAAGGAAGCAGCTAACTTCAC
TGCCCAGGTCATCATTATGAATCACCCTGGCCAGATTGGAAACGGTTATGCTCCTGTGCTCGATTGCCACACCTCTCACATTGCTGTCAA
GTTCAAAGAGATTTTGACCAAGATTGACAGACGTTCTGGCAAGGAGCTAGAGAAGGAGCCCAAGTTTTTGAAGAATGGTGACGCAGGGTT
TGTTAAGATGATTCCCACCAAGCCCATGGTCGTTGAAACTTTCTCCGAGTATCCCCCACTTGGTCGTTTTGCTGTGAGGGACATGCGCCA
GACAGTTGCTGTGGGAGTCATCAAGGCTGTGGAGAAGAAGGATCCCAGCGGAGCCAAGGTTACCAAGTCTGCAGCCAAGAAGAAGTGA
AT
TGTGCGCTTTGCAGGTGCAAGTGAAGGCCATCTTCAGTGTGGTTATAATAAAGCATGGGTGGTTGCTACTAGTATTTTCAGTCGGTCGTC
AGTTGTCGTCTTTGCCATTCATAGGCTCAAGTTCCCTCCGTCTTCATGTGGCTGTTCACAGAATTGGGTTCTCGATAGGCGGTGGCGAGC
TTACTTGTGTTTTTTCTAATTCTGTTCTGTTATCCTAGCTATGTTCTGTGACTATCTTTTTAAGCAGCTTTCACATGCTGCCTGGATATT
GTTTACGTTTATATAATATGGACTTAATACTGTGTCAGATTTTTTGTGTGCTCTTCTTTGAGTTTTTTCAACAGCAATGTTTGCCTGTAC
AAAAAAGTAAAAACAGGG


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF00009    Elongation factor Tu GTP binding domain

        GO:0003924     GO:0003924

        GO:0005525     GO:0005525

PF03143    Elongation factor Tu C-terminal domain

        GO:0005525     GO:0005525

PF03144    Elongation factor Tu domain 2

        GO:0005525     GO:0005525

GO terms for RU06040 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
  GO:0006414-translational elongation
GO Molecular Function
  GO:0000166-nucleotide binding
  GO:0003746-translation elongation factor activity
  GO:0003924-GTPase activity
  GO:0005525-GTP binding
GO Cellular Component
  GO:0005737-cytoplasm