EST translation and GO annotation for unigene RU06143


ESTScan predicted protein sequence

MASLHLLCIASLASLLILANARIPGPYTGGPWQDAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIRCG
DDPRWCTPGKPSIFVTATNFCPPNFAQPSDNGGWCNPPRTHFDLAMPMFLKIAEYKAGIVPVSYRRVPCRKRGGIRFTVNGHKYFNLVLI
TNVAGAGDIVSVSVKGTNTGWMPMSRNWGQNWQSNSVLVGQALSFRVRGSDRRSSTTYNVAPANWQFGQTYSGKNFRV

ESTScan predicted coding region in original sequence      Start : 52 End : 828 Strand : plus

AAACCACCAGACCCAAGCTCACTACCAAATCCTCTCTCTCTCTGTGCTGCAATGGCTTCCCTTCATCTTCTCTGCATTGCTTCACTCGCC
TCTCTCCTCATCCTGGCTAATGCCAGAATCCCAGGGCCTTACACCGGTGGCCCCTGGCAGGACGCTCACGCCACCTTCTACGGCGGCAGC
GACGCCTCTGGAACCATGGGAGGCGCATGTGGGTACGGAAACCTTTACAGCCAGGGCTACGGAGTCAACACTGCTGCACTGAGCACTGCT
CTGTTCAACAATGGCCTCAGCTGCGGTGCTTGCTTTGAGATCAGGTGCGGCGACGACCCCAGGTGGTGCACCCCCGGAAAGCCCTCCATC
TTCGTCACCGCCACCAACTTCTGCCCTCCCAACTTCGCTCAGCCCAGCGACAATGGCGGTTGGTGCAACCCTCCCAGGACCCACTTCGAC
CTCGCCATGCCCATGTTCCTCAAGATCGCCGAGTACAAAGCCGGAATCGTCCCCGTCTCTTACCGCCGGGTCCCATGCAGAAAGAGGGGA
GGGATCAGGTTCACCGTCAACGGCCACAAGTACTTCAACCTGGTTCTGATCACCAACGTCGCGGGCGCAGGGGATATCGTGAGCGTGAGC
GTGAAGGGCACGAACACCGGATGGATGCCGATGAGCCGGAACTGGGGGCAAAACTGGCAATCCAATTCCGTCCTGGTGGGCCAGGCACTG
TCCTTCAGAGTCAGAGGCAGCGACAGGCGAAGCTCGACGACCTACAACGTGGCACCAGCTAATTGGCAGTTCGGGCAGACCTATTCCGGA
AAGAATTTCCGTGTTTGAGAAAAGCTCACCCGATTATCCTTTCCGTTTTTACTTTTTAACCTTTTTTTTTTTAATTTTCAATTTCGTTCC
CGCCTTTCGATTTTTCCTCAATTTTGCCGGGAAAAAATTGGAAGTGGAGGGGAGGGAGTAAGTGATAGAGAATTATGGGTGTAATGGGGT
TCTGGGTACGTAGGACAAGAAAAGCAAGGAAAGGGAAGGGAAGGAGATGGTGATAATATTAGGGTTAGGAAAGTGACCAAGTCTAAGTGT
GTCGGTTGCTACTTTTTTCTTTTACTTTTTTGGGTGATGCTTTTGGTTTTAGTGGGGTTTCTTTACTGGTCAAGTTTATGTAAACCAGTA
AAATTGTGTGGGGGCTGAAGCGGCTGCAGGAACAAACATGTTGCCCGCAGCTCTCTTTTTCTATAATATATATATGATTACTATGTGACC
TATAATTGTGATTTTTGAATGTGTTTTACTTTGTCTATCTGGGTTTTTACCCTTTGTAACTTCTTTCAAATTGCCTATTCTAACTCATAA
AAAGTTAAAAGCC


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF01357    Pollen allergen

PF03330    Rare lipoprotein A (RlpA)-like double-psi beta-barrel

GO terms for RU06143 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
   GO:0009664-plant-type cell wall organization
GO Molecular Function
GO Cellular Component
   GO:0005576-extracellular region
  GO:0016020-membrane