Rose Transcriptome Database

EST translation and GO annotation for unigene RU06391

ESTScan predicted protein sequence

MAKELARVLVTGAAGQIGYALVPMIARGVMLGADQPVILHLLDIPFAAEALNGVKMELIDAAFPLLKGVVATTDVVEACTGVNIAVMVGG
FPRKEGMERKDVMSKNVSIYKSQASAXLDDVAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQVSERLNVQVSDVK
NVIIWGNHSSSQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFIATVNTGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMG
VYSDGSYNVPAGLIYSFPVTCCNGDWKIVQGLPIDEFSRKKLDATADELSEEKALAYTCIN

ESTScan predicted coding region in original sequence Start : 89 End : 1085 Strand : plus

GACTCTGAGTCTGTCTCTCTCTCTCTCTCTCTCTATCTCAGATCAACTTTAGCATCTTCAGATCGTTTCGTTTTCTTCATCGGAATCCAT
GGCGAAAGAACTTGCTCGCGTCCTTGTTACCGGAGCCGCAGGTCAAATCGGATATGCTCTTGTACCTATGATCGCTAGGGGAGTGATGCT
CGGAGCTGACCAGCCCGTGATCCTTCACCTTCTTGATATCCCATTTGCTGCTGAGGCATTGAATGGTGTCAAGATGGAGTTGATCGATGC
CGCTTTCCCTCTTCTCAAAGGTGTTGTTGCTACAACTGATGTTGTGGAGGCCTGTACCGGAGTCAACATTGCAGTCATGGTTGGTGGCTT
CCCGAGGAAAGAGGGCATGGAAAGGAAAGATGTCATGTCAAAGAACGTTTCTATCTATAAGTCCCAAGCTTCTGCAXCTTTAGATGATGT
AGCTGCTAACTGCAAGGTTTTGGTTGTTGCTAATCCTGCAAACACCAACGCTTTGATCTTGAAGGAATTTGCACCATCAATTCCTGAGAA
AAACATATCTTGCCTGACGAGACTGGACCATAACAGGGCATTGGGCCAGGTTTCAGAGAGATTGAATGTTCAAGTTTCTGATGTGAAAAA
TGTCATTATCTGGGGAAACCACTCATCATCTCAGTATCCTGATGTCAACCATGCAACTGTCAAGACACCATCTGGAGAGAAGCCCGTCCG
TGAGCTTGTTGCTGATGATGCTTGGTTGAATGGAGAATTCATTGCCACTGTCAACACGGGTGCTGCAATTATCAAGGCCCGAAAGCTATC
CAGTGCATTGTCAGCTGCTAGTTCTGCTTGTGATCACATCAGGGATTGGGTACTTGGAACCCCAGAGGGCACTTGGGTTTCCATGGGTGT
TTACTCTGATGGCTCGTACAATGTACCAGCTGGTCTCATTTACTCATTCCCAGTCACTTGCTGTAATGGAGATTGGAAGATTGTTCAGGG
ACTCCCTATTGATGAGTTCTCCAGGAAGAAGTTGGATGCGACCGCCGATGAGCTTTCAGAGGAGAAGGCCTTGGCATACACTTGCATCAA
TTAATCACCCTTGTGTATTTCTCAGTGTGGTTGTAACTTGGCATACACTTGCATCGGTGTCTGTCAAATGGAGGTAGGCTGAAGTTTTGA
AATAATGCCATTGTTAAGGTAGAGAGAACTGTAATGATGGAGAGGCTGCTTCTCTGGATTTAACTGTTGTTTTACCCATTATATATGCGG
ATATTTGACCTTTTTTCCGATTGTAATCGCATATTTGAATGTCAGTGGGACTTGAAAATTATCCATATCTTCGTTGCTAGTTGATTATAA
TTTGTTATTGCC

X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS

InterProtein domain annotations

Pfam domain annotations

PF00056    lactate/malate dehydrogenase, NAD binding domain

        GO:0016491     GO:0016491

PF02866    lactate/malate dehydrogenase, alpha/beta C-terminal domain

        GO:0016491     GO:0016491

GO terms for RU06391 (based on the top Swiss-Prot and TrEMBL hits)

GO Biological Process

  GO:0005975-carbohydrate metabolic process
  GO:0006096-glycolysis
  GO:0006099-tricarboxylic acid cycle
  GO:0006108-malate metabolic process
  GO:0008152-metabolic process
  GO:0044262-cellular carbohydrate metabolic process
  GO:0055114-oxidation reduction

GO Molecular Function

  GO:0003824-catalytic activity
  GO:0005488-binding
  GO:0016491-oxidoreductase activity
  GO:0016615-malate dehydrogenase activity
  GO:0016616-oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
  GO:0030060-L-malate dehydrogenase activity