Rose Transcriptome Database

EST translation and GO annotation for unigene RU11562

ESTScan predicted protein sequence

MSERLTGTVKWFNDQKGFGFITPADGGEDLFVHQSSIRTEGFRTLGDGESVEFQIESX

ESTScan predicted coding region in original sequence Start : 111 End : 283 Strand : minus

GCTAGAAAACGAGAGAGAGAGAGATTGGAAATCGGTGTGGGTCGTCTTCTTCGTTTTCTAGGGTTTCTAGGGTTTTCAGATTTTAAGGGT
TTTTTTGTCTTTCTGTGAGGATGAGTGAGAGGCTGACCGGAACGGTGAAGTGGTTCAATGACCAGAAGGGGTTCGGCTTCATCACCCCGG
CGGACGGCGGCGAGGATCTCTTCGTCCACCAGTCCTCGATCCGAACCGAAGGCTTCCGGACTCTCGGCGACGGTGAGTCCGTCGAGTTCC
AGATCGAGTCCGAX

X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS

InterProtein domain annotations

Pfam domain annotations

PF00313    'Cold-shock' DNA-binding domain

        GO:0003677     GO:0003677

        GO:0006355     GO:0006355

GO terms for RU11562 (based on the top Swiss-Prot and TrEMBL hits)

GO Biological Process

GO:0006355-regulation of transcription, DNA-dependent

GO Molecular Function

  GO:0000166-nucleotide binding
  GO:0003676-nucleic acid binding
  GO:0003677-DNA binding