EST translation and GO annotation for unigene RU16212


ESTScan predicted protein sequence

XWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIMTGTMFTVYYKPRTSPAEFIV

ESTScan predicted coding region in original sequence      Start : 1 End : 250 Strand : plus


XXTTGGAGTGTTTTCGTTAGCTCCAAGAGGCTTGTTGCAGGGGATGCATTTATATTTCTAAGGGGTGAAAATGGGGAGCTCCGTGTTGGT
GTTAGACGTGCAATGAGACAGCAGGGCAATGTTCCATCTTCAGTAATATCTAGTCACAGCATGCACCTTGGTGTACTGGCAACTGCATGG
CATGCCATTATGACAGGAACCATGTTCACTGTCTACTACAAGCCAAGGACAAGCCCGGCTGAGTTCATTGTT


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF02362    B3 DNA binding domain

        GO:0003677     GO:0003677

        GO:0006355     GO:0006355

PF06507    Auxin response factor

        GO:0003677     GO:0003677

        GO:0005634     GO:0005634

        GO:0009725     GO:0009725

        GO:0045449     GO:0045449

GO terms for RU16212 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
   GO:0006355-regulation of transcription, DNA-dependent
  GO:0009725-response to hormone stimulus
  GO:0045449-regulation of transcription
GO Molecular Function
   GO:0003677-DNA binding
  GO:0046983-protein dimerization activity
GO Cellular Component
   GO:0005634-nucleus